EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004859 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 7912 bases
Position: chrUn_random:72334305-72342216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007521	BRK	PF07533.16	8.8e-17	1	1
ENSTNIP00000018409	BRK	PF07533.16	9.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018635	-	3564	-	ENSTNIP00000018409	1188 (aa)	-	H3DD16
ENSTNIT00000007681	-	3483	-	ENSTNIP00000007521	1161 (aa)	-	H3CGZ3

Gene Model

Click here to download ENSTNIG00000004859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004859	-	98	83.986	ENSTNIG00000004536	SMARCA4	73	82.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004859	-	100	84.342	ENSG00000127616	SMARCA4	76	95.652	Homo_sapiens
ENSTNIG00000004859	-	81	89.210	ENSAPOG00000003509	smarca4a	74	86.986	Acanthochromis_polyacanthus
ENSTNIG00000004859	-	96	86.272	ENSAPOG00000004542	SMARCA4	78	83.265	Acanthochromis_polyacanthus
ENSTNIG00000004859	-	100	83.778	ENSAMEG00000010868	SMARCA4	74	83.407	Ailuropoda_melanoleuca
ENSTNIG00000004859	-	100	92.883	ENSACIG00000021550	smarca4a	73	92.883	Amphilophus_citrinellus
ENSTNIG00000004859	-	97	89.431	ENSAOCG00000019167	smarca4a	78	89.431	Amphiprion_ocellaris
ENSTNIG00000004859	-	100	84.397	ENSAOCG00000009450	-	76	84.397	Amphiprion_ocellaris
ENSTNIG00000004859	-	97	89.431	ENSAPEG00000015559	smarca4a	78	89.431	Amphiprion_percula
ENSTNIG00000004859	-	100	84.397	ENSAPEG00000023108	-	71	84.397	Amphiprion_percula
ENSTNIG00000004859	-	100	85.053	ENSATEG00000001094	-	76	79.845	Anabas_testudineus
ENSTNIG00000004859	-	100	92.883	ENSATEG00000011524	smarca4a	73	92.883	Anabas_testudineus
ENSTNIG00000004859	-	100	83.889	ENSANAG00000036991	SMARCA4	73	84.859	Aotus_nancymaae
ENSTNIG00000004859	-	100	93.594	ENSACLG00000000163	smarca4a	74	93.594	Astatotilapia_calliptera
ENSTNIG00000004859	-	96	86.667	ENSACLG00000008638	-	74	83.688	Astatotilapia_calliptera
ENSTNIG00000004859	-	100	86.572	ENSAMXG00000011238	-	78	84.898	Astyanax_mexicanus
ENSTNIG00000004859	-	100	85.106	ENSBTAG00000019220	SMARCA4	73	85.106	Bos_taurus
ENSTNIG00000004859	-	100	83.889	ENSCJAG00000005936	SMARCA4	73	84.859	Callithrix_jacchus
ENSTNIG00000004859	-	100	84.043	ENSCAFG00000017584	SMARCA4	73	85.461	Canis_familiaris
ENSTNIG00000004859	-	100	84.342	ENSCAFG00020024620	SMARCA4	73	85.461	Canis_lupus_dingo
ENSTNIG00000004859	-	100	85.106	ENSCHIG00000015318	SMARCA4	73	85.106	Capra_hircus
ENSTNIG00000004859	-	100	84.753	ENSTSYG00000012966	SMARCA4	73	85.461	Carlito_syrichta
ENSTNIG00000004859	-	100	83.274	ENSCAPG00000015932	SMARCA4	71	88.146	Cavia_aperea
ENSTNIG00000004859	-	100	84.397	ENSCPOG00000015549	SMARCA4	73	85.816	Cavia_porcellus
ENSTNIG00000004859	-	100	84.043	ENSCCAG00000031660	SMARCA4	72	84.859	Cebus_capucinus
ENSTNIG00000004859	-	100	84.043	ENSCATG00000029530	SMARCA4	74	84.859	Cercocebus_atys
ENSTNIG00000004859	-	100	84.865	ENSCLAG00000011946	SMARCA4	73	85.765	Chinchilla_lanigera
ENSTNIG00000004859	-	100	84.169	ENSCPBG00000009994	SMARCA4	73	84.859	Chrysemys_picta_bellii
ENSTNIG00000004859	-	100	84.043	ENSCANG00000036013	SMARCA4	74	84.859	Colobus_angolensis_palliatus
ENSTNIG00000004859	-	100	84.752	ENSCGRG00001016732	Smarca4	73	85.106	Cricetulus_griseus_chok1gshd
ENSTNIG00000004859	-	100	84.752	ENSCGRG00000017242	Smarca4	74	85.106	Cricetulus_griseus_crigri
ENSTNIG00000004859	-	100	92.171	ENSCSEG00000014771	smarca4a	74	92.171	Cynoglossus_semilaevis
ENSTNIG00000004859	-	100	90.036	ENSCVAG00000006979	smarca4a	73	91.459	Cyprinodon_variegatus
ENSTNIG00000004859	-	100	84.487	ENSCVAG00000003018	-	74	84.397	Cyprinodon_variegatus
ENSTNIG00000004859	-	100	88.298	ENSDARG00000077226	smarca4a	73	88.298	Danio_rerio
ENSTNIG00000004859	-	100	83.630	ENSDARG00000104339	SMARCA4	75	83.630	Danio_rerio
ENSTNIG00000004859	-	99	77.862	ENSDNOG00000048847	SMARCA4	67	88.778	Dasypus_novemcinctus
ENSTNIG00000004859	-	89	91.824	ENSDORG00000002544	Smarca4	71	92.405	Dipodomys_ordii
ENSTNIG00000004859	-	99	77.778	ENSETEG00000013361	SMARCA4	73	79.048	Echinops_telfairi
ENSTNIG00000004859	-	100	84.043	ENSEASG00005006167	SMARCA4	73	85.461	Equus_asinus_asinus
ENSTNIG00000004859	-	100	84.043	ENSECAG00000008334	SMARCA4	73	85.461	Equus_caballus
ENSTNIG00000004859	-	100	88.542	ENSELUG00000010247	smarca4a	72	88.542	Esox_lucius
ENSTNIG00000004859	-	99	85.816	ENSELUG00000023232	-	70	85.816	Esox_lucius
ENSTNIG00000004859	-	100	84.000	ENSFCAG00000004894	SMARCA4	74	84.507	Felis_catus
ENSTNIG00000004859	-	82	89.747	ENSFALG00000004208	SMARCA4	73	84.043	Ficedula_albicollis
ENSTNIG00000004859	-	100	84.187	ENSFDAG00000012237	SMARCA4	77	85.563	Fukomys_damarensis
ENSTNIG00000004859	-	100	90.391	ENSFHEG00000010182	smarca4a	73	91.815	Fundulus_heteroclitus
ENSTNIG00000004859	-	100	84.043	ENSFHEG00000007902	-	72	84.043	Fundulus_heteroclitus
ENSTNIG00000004859	-	88	86.387	ENSGMOG00000002649	smarca4a	66	87.562	Gadus_morhua
ENSTNIG00000004859	-	91	84.530	ENSGMOG00000005756	-	69	84.530	Gadus_morhua
ENSTNIG00000004859	-	76	83.946	ENSGALG00000047145	SMARCA4	76	83.463	Gallus_gallus
ENSTNIG00000004859	-	99	82.624	ENSGAFG00000008827	-	72	81.206	Gambusia_affinis
ENSTNIG00000004859	-	96	91.103	ENSGAFG00000014900	smarca4a	76	91.103	Gambusia_affinis
ENSTNIG00000004859	-	100	80.659	ENSGACG00000016033	-	75	80.926	Gasterosteus_aculeatus
ENSTNIG00000004859	-	100	92.553	ENSGACG00000006691	smarca4a	73	92.553	Gasterosteus_aculeatus
ENSTNIG00000004859	-	100	84.698	ENSGAGG00000016757	SMARCA4	73	85.765	Gopherus_agassizii
ENSTNIG00000004859	-	100	84.043	ENSGGOG00000009882	SMARCA4	74	84.859	Gorilla_gorilla
ENSTNIG00000004859	-	96	86.667	ENSHBUG00000005447	-	74	83.688	Haplochromis_burtoni
ENSTNIG00000004859	-	100	93.594	ENSHBUG00000021172	smarca4a	73	93.594	Haplochromis_burtoni
ENSTNIG00000004859	-	100	84.222	ENSHGLG00000010519	SMARCA4	73	84.561	Heterocephalus_glaber_female
ENSTNIG00000004859	-	100	83.889	ENSHGLG00100013774	SMARCA4	74	83.518	Heterocephalus_glaber_male
ENSTNIG00000004859	-	100	92.199	ENSHCOG00000009510	smarca4a	74	92.199	Hippocampus_comes
ENSTNIG00000004859	-	100	84.452	ENSIPUG00000016346	-	73	84.043	Ictalurus_punctatus
ENSTNIG00000004859	-	100	86.525	ENSIPUG00000006107	smarca4a	73	87.589	Ictalurus_punctatus
ENSTNIG00000004859	-	100	84.111	ENSSTOG00000007939	SMARCA4	73	85.461	Ictidomys_tridecemlineatus
ENSTNIG00000004859	-	100	84.111	ENSJJAG00000012877	Smarca4	73	83.407	Jaculus_jaculus
ENSTNIG00000004859	-	100	84.752	ENSKMAG00000019518	-	75	84.752	Kryptolebias_marmoratus
ENSTNIG00000004859	-	100	91.103	ENSKMAG00000011931	smarca4a	73	91.103	Kryptolebias_marmoratus
ENSTNIG00000004859	-	82	95.000	ENSLBEG00000020655	-	70	95.000	Labrus_bergylta
ENSTNIG00000004859	-	100	87.544	ENSLBEG00000017383	smarca4a	74	87.544	Labrus_bergylta
ENSTNIG00000004859	-	71	80.072	ENSLACG00000015309	SMARCA4	100	79.712	Latimeria_chalumnae
ENSTNIG00000004859	-	100	86.170	ENSLOCG00000007820	smarca4a	73	86.170	Lepisosteus_oculatus
ENSTNIG00000004859	-	100	84.000	ENSLAFG00000001433	SMARCA4	73	85.461	Loxodonta_africana
ENSTNIG00000004859	-	100	84.043	ENSMFAG00000032146	SMARCA4	74	84.859	Macaca_fascicularis
ENSTNIG00000004859	-	100	84.043	ENSMMUG00000012042	SMARCA4	74	84.859	Macaca_mulatta
ENSTNIG00000004859	-	100	84.043	ENSMNEG00000028512	SMARCA4	74	84.859	Macaca_nemestrina
ENSTNIG00000004859	-	100	84.043	ENSMLEG00000034976	SMARCA4	74	84.859	Mandrillus_leucophaeus
ENSTNIG00000004859	-	100	92.527	ENSMAMG00000009256	smarca4a	73	92.527	Mastacembelus_armatus
ENSTNIG00000004859	-	100	84.512	ENSMAMG00000002841	-	75	84.397	Mastacembelus_armatus
ENSTNIG00000004859	-	100	93.594	ENSMZEG00005003889	smarca4a	73	93.594	Maylandia_zebra
ENSTNIG00000004859	-	100	83.688	ENSMZEG00005023861	-	73	83.688	Maylandia_zebra
ENSTNIG00000004859	-	100	83.860	ENSMAUG00000020731	Smarca4	73	84.211	Mesocricetus_auratus
ENSTNIG00000004859	-	100	84.000	ENSMICG00000009806	SMARCA4	73	84.859	Microcebus_murinus
ENSTNIG00000004859	-	100	84.561	ENSMOCG00000022209	Smarca4	73	84.912	Microtus_ochrogaster
ENSTNIG00000004859	-	100	82.624	ENSMMOG00000008466	-	71	82.624	Mola_mola
ENSTNIG00000004859	-	100	88.634	ENSMMOG00000007571	smarca4a	76	87.922	Mola_mola
ENSTNIG00000004859	-	100	84.650	ENSMODG00000006287	SMARCA4	73	84.053	Monodelphis_domestica
ENSTNIG00000004859	-	93	84.192	ENSMALG00000021534	-	78	82.857	Monopterus_albus
ENSTNIG00000004859	-	100	93.238	ENSMALG00000003388	smarca4a	73	93.238	Monopterus_albus
ENSTNIG00000004859	-	100	85.765	MGP_CAROLIEiJ_G0031879	Smarca4	85	85.158	Mus_caroli
ENSTNIG00000004859	-	100	85.765	ENSMUSG00000032187	Smarca4	85	85.158	Mus_musculus
ENSTNIG00000004859	-	100	85.765	MGP_PahariEiJ_G0014745	Smarca4	85	85.784	Mus_pahari
ENSTNIG00000004859	-	100	85.765	MGP_SPRETEiJ_G0033003	Smarca4	85	85.158	Mus_spretus
ENSTNIG00000004859	-	100	84.043	ENSMPUG00000005711	SMARCA4	73	85.461	Mustela_putorius_furo
ENSTNIG00000004859	-	100	84.444	ENSMLUG00000004491	-	73	85.816	Myotis_lucifugus
ENSTNIG00000004859	-	100	85.816	ENSNGAG00000021852	Smarca4	73	86.170	Nannospalax_galili
ENSTNIG00000004859	-	83	90.456	ENSNBRG00000018865	-	78	82.857	Neolamprologus_brichardi
ENSTNIG00000004859	-	100	87.900	ENSNBRG00000011457	smarca4a	73	88.612	Neolamprologus_brichardi
ENSTNIG00000004859	-	96	83.333	ENSNLEG00000012389	SMARCA4	74	84.232	Nomascus_leucogenys
ENSTNIG00000004859	-	84	82.759	ENSOPRG00000000885	-	58	82.759	Ochotona_princeps
ENSTNIG00000004859	-	100	83.146	ENSODEG00000017127	SMARCA4	73	82.774	Octodon_degus
ENSTNIG00000004859	-	100	94.306	ENSONIG00000008196	smarca4a	73	94.306	Oreochromis_niloticus
ENSTNIG00000004859	-	96	87.024	ENSONIG00000018040	-	70	84.323	Oreochromis_niloticus
ENSTNIG00000004859	-	99	79.348	ENSOCUG00000001787	SMARCA4	72	80.797	Oryctolagus_cuniculus
ENSTNIG00000004859	-	96	87.008	ENSORLG00000003955	-	76	83.265	Oryzias_latipes
ENSTNIG00000004859	-	100	92.171	ENSORLG00000015452	smarca4a	73	92.171	Oryzias_latipes
ENSTNIG00000004859	-	96	87.039	ENSORLG00020009728	-	76	83.265	Oryzias_latipes_hni
ENSTNIG00000004859	-	100	92.171	ENSORLG00020004611	smarca4a	73	92.171	Oryzias_latipes_hni
ENSTNIG00000004859	-	96	86.445	ENSORLG00015007739	-	75	83.265	Oryzias_latipes_hsok
ENSTNIG00000004859	-	100	92.171	ENSORLG00015016560	smarca4a	88	85.963	Oryzias_latipes_hsok
ENSTNIG00000004859	-	96	87.189	ENSOMEG00000016626	-	67	86.423	Oryzias_melastigma
ENSTNIG00000004859	-	100	92.171	ENSOMEG00000007486	smarca4a	73	92.171	Oryzias_melastigma
ENSTNIG00000004859	-	97	84.257	ENSOGAG00000016148	SMARCA4	80	83.554	Otolemur_garnettii
ENSTNIG00000004859	-	100	85.106	ENSOARG00000017454	SMARCA4	73	85.106	Ovis_aries
ENSTNIG00000004859	-	100	84.043	ENSPPAG00000043191	SMARCA4	74	84.859	Pan_paniscus
ENSTNIG00000004859	-	100	84.000	ENSPPRG00000000064	SMARCA4	74	84.507	Panthera_pardus
ENSTNIG00000004859	-	84	89.481	ENSPTIG00000017447	SMARCA4	73	80.469	Panthera_tigris_altaica
ENSTNIG00000004859	-	100	84.043	ENSPTRG00000010488	SMARCA4	74	84.859	Pan_troglodytes
ENSTNIG00000004859	-	100	84.076	ENSPANG00000011042	SMARCA4	74	84.859	Papio_anubis
ENSTNIG00000004859	-	100	87.234	ENSPKIG00000007770	SMARCA4	73	87.234	Paramormyrops_kingsleyae
ENSTNIG00000004859	-	100	85.106	ENSPKIG00000010087	-	74	85.106	Paramormyrops_kingsleyae
ENSTNIG00000004859	-	100	81.159	ENSPSIG00000005547	SMARCA4	73	81.382	Pelodiscus_sinensis
ENSTNIG00000004859	-	100	84.561	ENSPEMG00000020389	Smarca4	73	84.912	Peromyscus_maniculatus_bairdii
ENSTNIG00000004859	-	100	84.650	ENSPCIG00000017138	SMARCA4	73	85.409	Phascolarctos_cinereus
ENSTNIG00000004859	-	96	86.391	ENSPFOG00000012930	-	70	83.501	Poecilia_formosa
ENSTNIG00000004859	-	100	90.747	ENSPFOG00000007892	smarca4a	73	90.747	Poecilia_formosa
ENSTNIG00000004859	-	88	90.120	ENSPLAG00000018616	-	73	84.340	Poecilia_latipinna
ENSTNIG00000004859	-	100	90.747	ENSPLAG00000014294	smarca4a	73	90.747	Poecilia_latipinna
ENSTNIG00000004859	-	100	90.747	ENSPMEG00000003725	smarca4a	74	90.747	Poecilia_mexicana
ENSTNIG00000004859	-	100	84.043	ENSPMEG00000008929	-	72	83.034	Poecilia_mexicana
ENSTNIG00000004859	-	100	83.688	ENSPREG00000014823	-	71	83.929	Poecilia_reticulata
ENSTNIG00000004859	-	100	90.391	ENSPREG00000014608	smarca4a	78	90.391	Poecilia_reticulata
ENSTNIG00000004859	-	100	83.778	ENSPPYG00000009568	SMARCA4	73	83.407	Pongo_abelii
ENSTNIG00000004859	-	79	91.429	ENSPCAG00000014054	SMARCA4	56	91.429	Procavia_capensis
ENSTNIG00000004859	-	100	84.043	ENSPCOG00000023011	SMARCA4	74	84.859	Propithecus_coquereli
ENSTNIG00000004859	-	93	79.903	ENSPVAG00000007787	SMARCA4	69	79.661	Pteropus_vampyrus
ENSTNIG00000004859	-	100	93.238	ENSPNYG00000000717	smarca4a	74	93.238	Pundamilia_nyererei
ENSTNIG00000004859	-	86	90.318	ENSPNYG00000023995	-	74	83.688	Pundamilia_nyererei
ENSTNIG00000004859	-	100	86.879	ENSPNAG00000006636	-	74	85.765	Pygocentrus_nattereri
ENSTNIG00000004859	-	100	85.765	ENSRNOG00000009271	Smarca4	73	86.121	Rattus_norvegicus
ENSTNIG00000004859	-	100	84.043	ENSRBIG00000038696	SMARCA4	74	84.859	Rhinopithecus_bieti
ENSTNIG00000004859	-	100	84.043	ENSRROG00000045509	SMARCA4	74	84.859	Rhinopithecus_roxellana
ENSTNIG00000004859	-	100	87.117	ENSSBOG00000026896	SMARCA4	72	86.465	Saimiri_boliviensis_boliviensis
ENSTNIG00000004859	-	100	84.650	ENSSHAG00000001642	SMARCA4	73	85.765	Sarcophilus_harrisii
ENSTNIG00000004859	-	100	85.866	ENSSFOG00015009921	-	73	85.866	Scleropages_formosus
ENSTNIG00000004859	-	100	88.298	ENSSFOG00015013823	smarca4	73	88.298	Scleropages_formosus
ENSTNIG00000004859	-	100	91.844	ENSSMAG00000003200	smarca4a	71	91.844	Scophthalmus_maximus
ENSTNIG00000004859	-	100	84.698	ENSSMAG00000014082	-	68	85.596	Scophthalmus_maximus
ENSTNIG00000004859	-	100	83.746	ENSSDUG00000005388	-	73	83.911	Seriola_dumerili
ENSTNIG00000004859	-	100	93.238	ENSSDUG00000017298	smarca4a	73	93.238	Seriola_dumerili
ENSTNIG00000004859	-	97	93.089	ENSSLDG00000024486	smarca4a	78	93.089	Seriola_lalandi_dorsalis
ENSTNIG00000004859	-	100	84.452	ENSSLDG00000023663	-	74	84.546	Seriola_lalandi_dorsalis
ENSTNIG00000004859	-	60	96.894	ENSSARG00000013477	SMARCA4	59	96.894	Sorex_araneus
ENSTNIG00000004859	-	100	82.534	ENSSPUG00000004558	SMARCA4	75	82.192	Sphenodon_punctatus
ENSTNIG00000004859	-	100	84.397	ENSSPAG00000012533	-	72	84.397	Stegastes_partitus
ENSTNIG00000004859	-	100	89.680	ENSSPAG00000004248	smarca4a	73	87.922	Stegastes_partitus
ENSTNIG00000004859	-	100	84.211	ENSSSCG00000013629	SMARCA4	73	84.211	Sus_scrofa
ENSTNIG00000004859	-	57	91.525	ENSTGUG00000015488	-	77	90.164	Taeniopygia_guttata
ENSTNIG00000004859	-	97	90.650	ENSTRUG00000004885	smarca4a	78	88.618	Takifugu_rubripes
ENSTNIG00000004859	-	99	83.274	ENSTRUG00000001378	SMARCA4	69	83.707	Takifugu_rubripes
ENSTNIG00000004859	-	64	98.305	ENSTBEG00000000707	-	51	95.455	Tupaia_belangeri
ENSTNIG00000004859	-	100	84.076	ENSTTRG00000009519	SMARCA4	73	83.703	Tursiops_truncatus
ENSTNIG00000004859	-	100	84.043	ENSUAMG00000014661	SMARCA4	73	85.461	Ursus_americanus
ENSTNIG00000004859	-	100	84.043	ENSUMAG00000022005	SMARCA4	78	87.795	Ursus_maritimus
ENSTNIG00000004859	-	100	84.043	ENSVVUG00000017820	SMARCA4	71	85.461	Vulpes_vulpes
ENSTNIG00000004859	-	100	82.677	ENSXETG00000009355	smarca4	87	82.327	Xenopus_tropicalis
ENSTNIG00000004859	-	100	82.393	ENSXCOG00000013494	-	71	82.979	Xiphophorus_couchianus
ENSTNIG00000004859	-	100	90.747	ENSXMAG00000006321	smarca4a	79	90.244	Xiphophorus_maculatus
ENSTNIG00000004859	-	100	82.979	ENSXMAG00000007030	-	72	82.472	Xiphophorus_maculatus