EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004902 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 6386 bases
Position: chr1:11079014-11085399
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007566	ResIII	PF04851.15	4.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007726	-	2487	-	ENSTNIP00000007566	829 (aa)	-	H3CH38

Gene Model

Click here to download ENSTNIG00000004902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004902	chd1l	55	30.600	ENSTNIG00000004716	rad54l	68	30.924
ENSTNIG00000004902	chd1l	50	30.060	ENSTNIG00000001002	ercc6l	87	30.219
ENSTNIG00000004902	chd1l	65	41.316	ENSTNIG00000017717	smarca5	52	41.316
ENSTNIG00000004902	chd1l	53	37.698	ENSTNIG00000017585	smarcad1a	57	37.698
ENSTNIG00000004902	chd1l	55	32.613	ENSTNIG00000018370	rad54b	55	32.417
ENSTNIG00000004902	chd1l	55	31.953	ENSTNIG00000000029	rad54b	87	32.150

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004902	chd1l	99	59.368	ENSG00000131778	CHD1L	96	60.133	Homo_sapiens
ENSTNIG00000004902	chd1l	99	70.918	ENSAPOG00000001539	chd1l	96	71.108	Acanthochromis_polyacanthus
ENSTNIG00000004902	chd1l	99	58.596	ENSAMEG00000017063	CHD1L	94	59.181	Ailuropoda_melanoleuca
ENSTNIG00000004902	chd1l	99	69.591	ENSACIG00000001164	chd1l	97	69.942	Amphilophus_citrinellus
ENSTNIG00000004902	chd1l	99	69.965	ENSAOCG00000014510	chd1l	83	70.318	Amphiprion_ocellaris
ENSTNIG00000004902	chd1l	99	67.371	ENSAPEG00000017573	chd1l	93	68.075	Amphiprion_percula
ENSTNIG00000004902	chd1l	99	67.256	ENSAPEG00000017450	chd1l	93	67.609	Amphiprion_percula
ENSTNIG00000004902	chd1l	99	70.296	ENSATEG00000013058	chd1l	91	70.296	Anabas_testudineus
ENSTNIG00000004902	chd1l	99	57.820	ENSAPLG00000009976	CHD1L	93	57.583	Anas_platyrhynchos
ENSTNIG00000004902	chd1l	99	56.467	ENSACAG00000017686	CHD1L	95	56.467	Anolis_carolinensis
ENSTNIG00000004902	chd1l	99	59.882	ENSANAG00000024347	CHD1L	94	59.532	Aotus_nancymaae
ENSTNIG00000004902	chd1l	99	69.754	ENSACLG00000019304	chd1l	94	69.448	Astatotilapia_calliptera
ENSTNIG00000004902	chd1l	99	60.023	ENSAMXG00000012367	chd1l	84	60.731	Astyanax_mexicanus
ENSTNIG00000004902	chd1l	99	58.775	ENSBTAG00000020831	CHD1L	94	59.717	Bos_taurus
ENSTNIG00000004902	chd1l	99	58.879	ENSCJAG00000002406	CHD1L	94	59.064	Callithrix_jacchus
ENSTNIG00000004902	chd1l	99	56.140	ENSCAFG00000010944	CHD1L	94	56.608	Canis_familiaris
ENSTNIG00000004902	chd1l	99	58.698	ENSCAFG00020020121	CHD1L	95	59.053	Canis_lupus_dingo
ENSTNIG00000004902	chd1l	99	58.775	ENSCHIG00000013871	CHD1L	94	60.167	Capra_hircus
ENSTNIG00000004902	chd1l	98	59.476	ENSTSYG00000003005	CHD1L	97	59.714	Carlito_syrichta
ENSTNIG00000004902	chd1l	99	57.895	ENSCPOG00000009000	CHD1L	95	58.363	Cavia_porcellus
ENSTNIG00000004902	chd1l	99	57.193	ENSCCAG00000036079	CHD1L	94	57.193	Cebus_capucinus
ENSTNIG00000004902	chd1l	99	59.463	ENSCATG00000031044	CHD1L	94	59.463	Cercocebus_atys
ENSTNIG00000004902	chd1l	99	59.415	ENSCLAG00000000880	CHD1L	95	60.117	Chinchilla_lanigera
ENSTNIG00000004902	chd1l	99	59.532	ENSCSAG00000018386	CHD1L	94	59.532	Chlorocebus_sabaeus
ENSTNIG00000004902	chd1l	99	59.155	ENSCPBG00000002600	CHD1L	95	59.155	Chrysemys_picta_bellii
ENSTNIG00000004902	chd1l	99	58.879	ENSCANG00000020239	CHD1L	94	58.879	Colobus_angolensis_palliatus
ENSTNIG00000004902	chd1l	99	58.920	ENSCGRG00001021624	Chd1l	95	59.390	Cricetulus_griseus_chok1gshd
ENSTNIG00000004902	chd1l	98	59.424	ENSCGRG00000007554	Chd1l	98	59.904	Cricetulus_griseus_crigri
ENSTNIG00000004902	chd1l	99	67.836	ENSCVAG00000002595	chd1l	89	67.251	Cyprinodon_variegatus
ENSTNIG00000004902	chd1l	99	63.700	ENSDARG00000015471	chd1l	83	64.052	Danio_rerio
ENSTNIG00000004902	chd1l	99	59.038	ENSDNOG00000019504	CHD1L	94	59.507	Dasypus_novemcinctus
ENSTNIG00000004902	chd1l	99	58.926	ENSDORG00000013555	Chd1l	94	59.277	Dipodomys_ordii
ENSTNIG00000004902	chd1l	89	57.428	ENSETEG00000008445	CHD1L	84	57.428	Echinops_telfairi
ENSTNIG00000004902	chd1l	69	71.739	ENSEBUG00000005791	chd1l	75	71.739	Eptatretus_burgeri
ENSTNIG00000004902	chd1l	99	59.312	ENSEASG00005007364	CHD1L	98	59.209	Equus_asinus_asinus
ENSTNIG00000004902	chd1l	99	59.075	ENSECAG00000008915	CHD1L	98	58.962	Equus_caballus
ENSTNIG00000004902	chd1l	99	55.896	ENSELUG00000016844	chd1l	82	55.425	Esox_lucius
ENSTNIG00000004902	chd1l	99	58.726	ENSFCAG00000007777	CHD1L	94	59.086	Felis_catus
ENSTNIG00000004902	chd1l	99	57.042	ENSFALG00000006087	CHD1L	94	57.512	Ficedula_albicollis
ENSTNIG00000004902	chd1l	98	60.000	ENSFDAG00000012431	CHD1L	97	60.357	Fukomys_damarensis
ENSTNIG00000004902	chd1l	99	68.433	ENSFHEG00000012420	chd1l	84	68.433	Fundulus_heteroclitus
ENSTNIG00000004902	chd1l	99	57.429	ENSGALG00000015038	CHD1L	94	57.547	Gallus_gallus
ENSTNIG00000004902	chd1l	99	68.611	ENSGAFG00000018198	chd1l	97	65.680	Gambusia_affinis
ENSTNIG00000004902	chd1l	62	77.087	ENSGACG00000014042	chd1l	98	77.087	Gasterosteus_aculeatus
ENSTNIG00000004902	chd1l	99	58.568	ENSGAGG00000014432	CHD1L	96	59.155	Gopherus_agassizii
ENSTNIG00000004902	chd1l	99	58.947	ENSGGOG00000001067	CHD1L	95	58.197	Gorilla_gorilla
ENSTNIG00000004902	chd1l	99	69.754	ENSHBUG00000007464	chd1l	96	69.601	Haplochromis_burtoni
ENSTNIG00000004902	chd1l	99	58.899	ENSHGLG00000008933	CHD1L	94	59.577	Heterocephalus_glaber_female
ENSTNIG00000004902	chd1l	98	57.551	ENSHGLG00100007155	CHD1L	97	58.383	Heterocephalus_glaber_male
ENSTNIG00000004902	chd1l	99	66.114	ENSHCOG00000012787	chd1l	92	66.232	Hippocampus_comes
ENSTNIG00000004902	chd1l	99	60.397	ENSIPUG00000022617	chd1l	83	60.517	Ictalurus_punctatus
ENSTNIG00000004902	chd1l	99	54.779	ENSSTOG00000007032	CHD1L	94	54.895	Ictidomys_tridecemlineatus
ENSTNIG00000004902	chd1l	99	67.920	ENSKMAG00000014358	chd1l	83	68.445	Kryptolebias_marmoratus
ENSTNIG00000004902	chd1l	99	69.276	ENSLBEG00000023845	chd1l	96	69.175	Labrus_bergylta
ENSTNIG00000004902	chd1l	99	53.418	ENSLACG00000006262	CHD1L	84	54.060	Latimeria_chalumnae
ENSTNIG00000004902	chd1l	99	63.389	ENSLOCG00000010574	chd1l	84	63.507	Lepisosteus_oculatus
ENSTNIG00000004902	chd1l	98	59.080	ENSLAFG00000018136	CHD1L	98	59.338	Loxodonta_africana
ENSTNIG00000004902	chd1l	99	59.290	ENSMFAG00000043562	CHD1L	97	59.705	Macaca_fascicularis
ENSTNIG00000004902	chd1l	99	59.579	ENSMMUG00000009024	CHD1L	94	59.579	Macaca_mulatta
ENSTNIG00000004902	chd1l	99	59.579	ENSMNEG00000039905	CHD1L	94	59.579	Macaca_nemestrina
ENSTNIG00000004902	chd1l	99	59.579	ENSMLEG00000030900	CHD1L	94	59.579	Mandrillus_leucophaeus
ENSTNIG00000004902	chd1l	99	69.050	ENSMAMG00000012822	chd1l	97	67.409	Mastacembelus_armatus
ENSTNIG00000004902	chd1l	99	69.871	ENSMZEG00005020830	chd1l	85	70.106	Maylandia_zebra
ENSTNIG00000004902	chd1l	98	57.211	ENSMGAG00000014304	CHD1L	97	57.449	Meleagris_gallopavo
ENSTNIG00000004902	chd1l	99	58.830	ENSMICG00000002497	CHD1L	94	59.766	Microcebus_murinus
ENSTNIG00000004902	chd1l	99	59.139	ENSMOCG00000006305	Chd1l	95	59.604	Microtus_ochrogaster
ENSTNIG00000004902	chd1l	99	67.450	ENSMMOG00000005964	chd1l	89	67.803	Mola_mola
ENSTNIG00000004902	chd1l	99	58.314	ENSMODG00000018717	CHD1L	95	58.431	Monodelphis_domestica
ENSTNIG00000004902	chd1l	99	69.565	ENSMALG00000014675	chd1l	83	70.153	Monopterus_albus
ENSTNIG00000004902	chd1l	99	59.203	MGP_CAROLIEiJ_G0025401	Chd1l	95	59.437	Mus_caroli
ENSTNIG00000004902	chd1l	99	59.070	ENSMUSG00000028089	Chd1l	95	59.419	Mus_musculus
ENSTNIG00000004902	chd1l	99	59.488	MGP_PahariEiJ_G0026845	Chd1l	95	59.953	Mus_pahari
ENSTNIG00000004902	chd1l	99	59.155	MGP_SPRETEiJ_G0026347	Chd1l	95	59.390	Mus_spretus
ENSTNIG00000004902	chd1l	99	58.844	ENSMPUG00000000615	CHD1L	94	59.434	Mustela_putorius_furo
ENSTNIG00000004902	chd1l	99	57.679	ENSMLUG00000007573	CHD1L	94	57.343	Myotis_lucifugus
ENSTNIG00000004902	chd1l	98	54.751	ENSNGAG00000000908	Chd1l	95	55.660	Nannospalax_galili
ENSTNIG00000004902	chd1l	99	66.433	ENSNBRG00000006021	chd1l	92	66.901	Neolamprologus_brichardi
ENSTNIG00000004902	chd1l	99	58.947	ENSNLEG00000000179	CHD1L	94	58.947	Nomascus_leucogenys
ENSTNIG00000004902	chd1l	98	51.429	ENSOPRG00000006973	CHD1L	98	51.667	Ochotona_princeps
ENSTNIG00000004902	chd1l	99	54.704	ENSODEG00000002494	CHD1L	95	56.098	Octodon_degus
ENSTNIG00000004902	chd1l	99	69.860	ENSONIG00000003183	chd1l	86	70.223	Oreochromis_niloticus
ENSTNIG00000004902	chd1l	90	55.239	ENSOANG00000003068	CHD1L	92	56.016	Ornithorhynchus_anatinus
ENSTNIG00000004902	chd1l	99	56.829	ENSOCUG00000009336	CHD1L	94	56.829	Oryctolagus_cuniculus
ENSTNIG00000004902	chd1l	99	67.654	ENSORLG00000003673	chd1l	93	67.654	Oryzias_latipes
ENSTNIG00000004902	chd1l	99	68.235	ENSORLG00020005123	chd1l	89	68.868	Oryzias_latipes_hni
ENSTNIG00000004902	chd1l	99	68.273	ENSORLG00015001680	chd1l	96	67.929	Oryzias_latipes_hsok
ENSTNIG00000004902	chd1l	76	72.388	ENSOMEG00000006109	chd1l	77	72.388	Oryzias_melastigma
ENSTNIG00000004902	chd1l	99	58.995	ENSOGAG00000008775	CHD1L	94	59.579	Otolemur_garnettii
ENSTNIG00000004902	chd1l	99	59.005	ENSOARG00000020547	CHD1L	97	59.786	Ovis_aries
ENSTNIG00000004902	chd1l	99	58.734	ENSPPAG00000039193	CHD1L	97	59.679	Pan_paniscus
ENSTNIG00000004902	chd1l	99	59.198	ENSPPRG00000010258	CHD1L	94	59.437	Panthera_pardus
ENSTNIG00000004902	chd1l	99	59.368	ENSPTRG00000001220	CHD1L	94	59.368	Pan_troglodytes
ENSTNIG00000004902	chd1l	99	59.812	ENSPANG00000009170	CHD1L	94	59.463	Papio_anubis
ENSTNIG00000004902	chd1l	99	62.426	ENSPKIG00000022166	chd1l	94	60.247	Paramormyrops_kingsleyae
ENSTNIG00000004902	chd1l	99	59.412	ENSPSIG00000012595	CHD1L	94	59.412	Pelodiscus_sinensis
ENSTNIG00000004902	chd1l	99	58.653	ENSPEMG00000013528	Chd1l	95	58.885	Peromyscus_maniculatus_bairdii
ENSTNIG00000004902	chd1l	95	57.973	ENSPCIG00000030409	CHD1L	97	58.344	Phascolarctos_cinereus
ENSTNIG00000004902	chd1l	99	67.874	ENSPFOG00000015948	chd1l	83	67.874	Poecilia_formosa
ENSTNIG00000004902	chd1l	99	68.298	ENSPLAG00000015145	chd1l	95	66.706	Poecilia_latipinna
ENSTNIG00000004902	chd1l	99	68.464	ENSPMEG00000008720	chd1l	89	68.113	Poecilia_mexicana
ENSTNIG00000004902	chd1l	99	67.333	ENSPREG00000017885	chd1l	96	66.863	Poecilia_reticulata
ENSTNIG00000004902	chd1l	99	59.765	ENSPPYG00000000946	CHD1L	93	59.765	Pongo_abelii
ENSTNIG00000004902	chd1l	95	52.163	ENSPCAG00000005959	CHD1L	90	53.488	Procavia_capensis
ENSTNIG00000004902	chd1l	98	56.303	ENSPVAG00000006084	CHD1L	98	56.423	Pteropus_vampyrus
ENSTNIG00000004902	chd1l	99	69.601	ENSPNYG00000013001	chd1l	95	69.601	Pundamilia_nyererei
ENSTNIG00000004902	chd1l	99	62.998	ENSPNAG00000011881	chd1l	82	63.349	Pygocentrus_nattereri
ENSTNIG00000004902	chd1l	99	58.879	ENSRNOG00000017669	Chd1l	95	59.698	Rattus_norvegicus
ENSTNIG00000004902	chd1l	99	58.879	ENSRBIG00000041272	CHD1L	94	58.879	Rhinopithecus_bieti
ENSTNIG00000004902	chd1l	99	58.995	ENSRROG00000041354	CHD1L	95	58.995	Rhinopithecus_roxellana
ENSTNIG00000004902	chd1l	99	57.462	ENSSHAG00000017395	CHD1L	94	57.579	Sarcophilus_harrisii
ENSTNIG00000004902	chd1l	99	62.867	ENSSFOG00015003649	chd1l	96	62.884	Scleropages_formosus
ENSTNIG00000004902	chd1l	99	66.937	ENSSMAG00000019377	chd1l	94	66.358	Scophthalmus_maximus
ENSTNIG00000004902	chd1l	99	68.833	ENSSDUG00000019831	chd1l	93	69.194	Seriola_dumerili
ENSTNIG00000004902	chd1l	99	68.209	ENSSLDG00000012714	chd1l	94	68.565	Seriola_lalandi_dorsalis
ENSTNIG00000004902	chd1l	99	56.593	ENSSPUG00000016865	CHD1L	95	57.293	Sphenodon_punctatus
ENSTNIG00000004902	chd1l	99	69.601	ENSSPAG00000017653	chd1l	89	69.953	Stegastes_partitus
ENSTNIG00000004902	chd1l	99	57.864	ENSSSCG00000006701	CHD1L	95	58.451	Sus_scrofa
ENSTNIG00000004902	chd1l	99	57.562	ENSTGUG00000013392	-	97	58.030	Taeniopygia_guttata
ENSTNIG00000004902	chd1l	98	56.548	ENSTTRG00000011711	CHD1L	97	57.262	Tursiops_truncatus
ENSTNIG00000004902	chd1l	99	58.363	ENSUAMG00000021991	CHD1L	95	60.072	Ursus_americanus
ENSTNIG00000004902	chd1l	99	58.159	ENSUMAG00000009733	CHD1L	96	59.592	Ursus_maritimus
ENSTNIG00000004902	chd1l	99	58.012	ENSVVUG00000007316	CHD1L	90	58.480	Vulpes_vulpes
ENSTNIG00000004902	chd1l	99	65.691	ENSXCOG00000008336	chd1l	83	65.691	Xiphophorus_couchianus
ENSTNIG00000004902	chd1l	99	68.581	ENSXMAG00000015898	chd1l	96	65.102	Xiphophorus_maculatus