EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004928 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3091 bases
Position: chr2_random:559118-562208
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007593	RIO1	PF01163.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007753	-	1266	-	ENSTNIP00000007593	422 (aa)	-	H3CH65

Gene Model

Click here to download ENSTNIG00000004928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004928	-	64	32.841	ENSTNIG00000001925	camk1gb	98	32.841
ENSTNIG00000004928	-	90	36.264	ENSTNIG00000008876	-	92	36.264
ENSTNIG00000004928	-	65	42.657	ENSTNIG00000008407	dapk2b	77	42.657
ENSTNIG00000004928	-	61	30.566	ENSTNIG00000002064	phkg1a	64	30.566
ENSTNIG00000004928	-	86	61.141	ENSTNIG00000011699	mylk5	59	61.141
ENSTNIG00000004928	-	60	41.379	ENSTNIG00000014909	dapk3	57	41.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004928	-	99	81.043	ENSAPOG00000019520	-	58	81.043	Acanthochromis_polyacanthus
ENSTNIG00000004928	-	100	75.887	ENSACIG00000024477	-	52	75.887	Amphilophus_citrinellus
ENSTNIG00000004928	-	99	81.517	ENSAOCG00000024465	-	59	81.517	Amphiprion_ocellaris
ENSTNIG00000004928	-	99	62.559	ENSAOCG00000014130	mylk5	52	62.322	Amphiprion_ocellaris
ENSTNIG00000004928	-	99	62.796	ENSAPEG00000017851	mylk5	52	62.559	Amphiprion_percula
ENSTNIG00000004928	-	99	81.517	ENSAPEG00000014652	-	50	81.517	Amphiprion_percula
ENSTNIG00000004928	-	100	76.303	ENSACLG00000007583	-	63	76.303	Astatotilapia_calliptera
ENSTNIG00000004928	-	100	63.593	ENSACLG00000003301	mylk5	50	63.593	Astatotilapia_calliptera
ENSTNIG00000004928	-	99	61.848	ENSAMXG00000019493	-	57	61.848	Astyanax_mexicanus
ENSTNIG00000004928	-	100	61.702	ENSCSEG00000017281	mylk5	57	61.229	Cynoglossus_semilaevis
ENSTNIG00000004928	-	99	61.848	ENSCVAG00000022813	mylk5	50	61.848	Cyprinodon_variegatus
ENSTNIG00000004928	-	99	63.981	ENSFHEG00000011638	-	52	63.507	Fundulus_heteroclitus
ENSTNIG00000004928	-	68	83.904	ENSGACG00000002123	-	90	83.333	Gasterosteus_aculeatus
ENSTNIG00000004928	-	100	62.972	ENSGACG00000008527	mylk5	64	62.972	Gasterosteus_aculeatus
ENSTNIG00000004928	-	100	74.645	ENSHBUG00000016459	-	66	74.645	Haplochromis_burtoni
ENSTNIG00000004928	-	100	73.286	ENSHCOG00000015710	-	54	73.286	Hippocampus_comes
ENSTNIG00000004928	-	99	60.993	ENSIPUG00000012659	mylk5	50	60.993	Ictalurus_punctatus
ENSTNIG00000004928	-	99	64.455	ENSKMAG00000019605	mylk5	50	63.507	Kryptolebias_marmoratus
ENSTNIG00000004928	-	99	62.559	ENSLBEG00000003526	mylk5	50	62.559	Labrus_bergylta
ENSTNIG00000004928	-	100	63.830	ENSMZEG00005022663	mylk5	50	63.830	Maylandia_zebra
ENSTNIG00000004928	-	100	61.702	ENSMMOG00000020584	mylk5	51	61.702	Mola_mola
ENSTNIG00000004928	-	100	77.778	ENSMALG00000022416	-	55	78.251	Monopterus_albus
ENSTNIG00000004928	-	100	63.084	ENSONIG00000001203	mylk5	90	63.084	Oreochromis_niloticus
ENSTNIG00000004928	-	99	76.651	ENSONIG00000016230	-	61	76.651	Oreochromis_niloticus
ENSTNIG00000004928	-	100	63.084	ENSONIG00000019875	-	90	63.084	Oreochromis_niloticus
ENSTNIG00000004928	-	99	59.005	ENSPLAG00000023779	mylk5	50	59.005	Poecilia_latipinna
ENSTNIG00000004928	-	99	60.664	ENSPMEG00000023897	mylk5	50	58.255	Poecilia_mexicana
ENSTNIG00000004928	-	99	59.953	ENSPREG00000009707	mylk5	57	59.953	Poecilia_reticulata
ENSTNIG00000004928	-	99	74.882	ENSPNYG00000019509	-	78	82.963	Pundamilia_nyererei
ENSTNIG00000004928	-	99	62.529	ENSSFOG00015004885	-	58	62.529	Scleropages_formosus
ENSTNIG00000004928	-	100	79.669	ENSSDUG00000020847	-	59	79.669	Seriola_dumerili
ENSTNIG00000004928	-	100	79.433	ENSSLDG00000019897	-	59	79.433	Seriola_lalandi_dorsalis
ENSTNIG00000004928	-	100	63.593	ENSSPAG00000020815	mylk5	51	63.593	Stegastes_partitus
ENSTNIG00000004928	-	99	82.303	ENSSPAG00000019068	-	56	82.303	Stegastes_partitus
ENSTNIG00000004928	-	100	67.612	ENSXCOG00000005927	-	86	76.952	Xiphophorus_couchianus