EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000005043 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 952 bases
Position: chrUn_random:74118341-74119292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004403	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000004542	-	374	-	ENSTNIP00000004403	113 (aa)	-	H3C831

Gene Model

Click here to download ENSTNIG00000005043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000005043	-	81	30.303	ENSTNIG00000004511	-	60	30.303
ENSTNIG00000005043	-	99	66.964	ENSTNIG00000019582	arf6b	62	66.964
ENSTNIG00000005043	-	98	69.369	ENSTNIG00000015063	-	61	69.369
ENSTNIG00000005043	-	96	35.000	ENSTNIG00000005278	arfrp1	88	36.283
ENSTNIG00000005043	-	98	30.328	ENSTNIG00000008635	sar1ab	60	30.328
ENSTNIG00000005043	-	98	71.171	ENSTNIG00000017954	-	62	71.171
ENSTNIG00000005043	-	98	72.072	ENSTNIG00000002029	arf2b	61	72.072
ENSTNIG00000005043	-	98	45.946	ENSTNIG00000005852	arl8	61	45.946
ENSTNIG00000005043	-	98	70.270	ENSTNIG00000014595	arf3b	61	70.270
ENSTNIG00000005043	-	93	44.444	ENSTNIG00000004344	arl3	59	44.444
ENSTNIG00000005043	-	99	30.508	ENSTNIG00000007336	arl8bb	62	30.508
ENSTNIG00000005043	-	90	43.519	ENSTNIG00000003426	-	54	43.519
ENSTNIG00000005043	-	98	45.045	ENSTNIG00000000814	arl5a	61	45.045
ENSTNIG00000005043	-	82	47.872	ENSTNIG00000010605	arl11	52	47.872
ENSTNIG00000005043	-	84	46.316	ENSTNIG00000014233	arl3l2	51	46.316
ENSTNIG00000005043	-	84	37.719	ENSTNIG00000004395	ARL6	55	37.719
ENSTNIG00000005043	-	99	72.321	ENSTNIG00000003348	arf5	63	72.321
ENSTNIG00000005043	-	83	47.872	ENSTNIG00000003015	arl5c	52	47.872
ENSTNIG00000005043	-	92	41.284	ENSTNIG00000009030	-	60	41.284
ENSTNIG00000005043	-	99	70.536	ENSTNIG00000011685	-	62	70.536
ENSTNIG00000005043	-	99	30.508	ENSTNIG00000014751	arl8ba	62	30.508
ENSTNIG00000005043	-	99	55.357	ENSTNIG00000006920	arl1	62	55.357
ENSTNIG00000005043	-	84	47.423	ENSTNIG00000009430	ARL6	52	47.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005043	-	99	80.357	ENSAPEG00000002838	-	63	80.357	Amphiprion_percula
ENSTNIG00000005043	-	83	85.106	ENSATEG00000003808	-	55	85.106	Anabas_testudineus
ENSTNIG00000005043	-	99	82.143	ENSATEG00000003847	-	63	82.143	Anabas_testudineus
ENSTNIG00000005043	-	99	82.143	ENSACLG00000009822	-	60	82.143	Astatotilapia_calliptera
ENSTNIG00000005043	-	88	75.758	ENSCVAG00000013902	-	61	75.758	Cyprinodon_variegatus
ENSTNIG00000005043	-	100	82.301	ENSGAFG00000002801	-	100	82.301	Gambusia_affinis
ENSTNIG00000005043	-	99	81.416	ENSGACG00000003831	-	63	81.416	Gasterosteus_aculeatus
ENSTNIG00000005043	-	99	80.357	ENSHBUG00000001250	-	63	80.357	Haplochromis_burtoni
ENSTNIG00000005043	-	99	82.143	ENSLBEG00000027205	-	63	82.143	Labrus_bergylta
ENSTNIG00000005043	-	99	82.143	ENSMAMG00000013955	-	63	82.143	Mastacembelus_armatus
ENSTNIG00000005043	-	99	82.143	ENSMZEG00005016274	-	63	82.143	Maylandia_zebra
ENSTNIG00000005043	-	99	82.143	ENSMZEG00005016277	-	63	82.143	Maylandia_zebra
ENSTNIG00000005043	-	99	77.679	ENSMMOG00000013651	-	62	77.679	Mola_mola
ENSTNIG00000005043	-	99	80.357	ENSONIG00000004340	-	63	80.357	Oreochromis_niloticus
ENSTNIG00000005043	-	99	82.143	ENSPLAG00000015887	-	63	82.143	Poecilia_latipinna
ENSTNIG00000005043	-	99	82.143	ENSPMEG00000007064	-	63	82.143	Poecilia_mexicana
ENSTNIG00000005043	-	99	82.143	ENSPREG00000000912	-	65	82.143	Poecilia_reticulata
ENSTNIG00000005043	-	99	62.238	ENSSMAG00000002487	-	53	83.146	Scophthalmus_maximus
ENSTNIG00000005043	-	98	82.883	ENSSDUG00000020599	-	62	82.883	Seriola_dumerili
ENSTNIG00000005043	-	98	83.784	ENSSLDG00000020097	-	62	83.784	Seriola_lalandi_dorsalis
ENSTNIG00000005043	-	98	82.883	ENSSPAG00000017484	-	62	82.883	Stegastes_partitus
ENSTNIG00000005043	-	97	90.000	ENSTRUG00000025171	-	68	90.000	Takifugu_rubripes
ENSTNIG00000005043	-	99	81.250	ENSXMAG00000029601	-	63	81.250	Xiphophorus_maculatus