EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSTNIG00000005053 (Gene tree)
Gene ID
-
Gene Symbol
rrp1
Alias
Nop52|cb43|nnp1|sb:cb43|wu:fb37f12|wu:fi05d01
Full Name
ribosomal RNA processing 1
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Plus strand
Length
3739 bases
Position
chrUn_random:74278999-74282737
Accession
ZDB-GENE-030131-9837
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000007718Nop52PF05997.121.5e-6411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000007879-1827-ENSTNIP00000007718608 (aa)-H3CHJ0
Gene Model
Click here to download ENSTNIG00000005053's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005053's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000005053rrp17051.685ENSG00000160208RRP1B5951.685Homo_sapiens
ENSTNIG00000005053rrp15450.000ENSG00000160214RRP18262.162Homo_sapiens
ENSTNIG00000005053rrp17068.481ENSAPOG00000007490-5360.287Acanthochromis_polyacanthus
ENSTNIG00000005053rrp17144.340ENSAMEG00000011401RRP1B6050.000Ailuropoda_melanoleuca
ENSTNIG00000005053rrp15448.991ENSAMEG00000011448RRP19243.607Ailuropoda_melanoleuca
ENSTNIG00000005053rrp15582.692ENSAOCG00000017894-8873.684Amphiprion_ocellaris
ENSTNIG00000005053rrp17965.526ENSATEG00000005045-5461.628Anabas_testudineus
ENSTNIG00000005053rrp16350.637ENSAPLG00000004310RRP1B5950.000Anas_platyrhynchos
ENSTNIG00000005053rrp16850.287ENSACAG00000017851RRP1B6348.193Anolis_carolinensis
ENSTNIG00000005053rrp17052.174ENSANAG00000034889RRP1B5952.174Aotus_nancymaae
ENSTNIG00000005053rrp15249.699ENSANAG00000037815RRP17549.398Aotus_nancymaae
ENSTNIG00000005053rrp15448.378ENSBTAG00000003981RRP18742.998Bos_taurus
ENSTNIG00000005053rrp17651.136ENSBTAG00000017418RRP1B6950.000Bos_taurus
ENSTNIG00000005053rrp18144.475ENSCJAG00000017077RRP1B6247.706Callithrix_jacchus
ENSTNIG00000005053rrp15449.856ENSCJAG00000043205RRP17049.415Callithrix_jacchus
ENSTNIG00000005053rrp17740.798ENSCAFG00000010621RRP1B7241.066Canis_familiaris
ENSTNIG00000005053rrp15450.291ENSCAFG00000010646RRP19343.052Canis_familiaris
ENSTNIG00000005053rrp15450.291ENSCAFG00020018979RRP19343.052Canis_lupus_dingo
ENSTNIG00000005053rrp18442.005ENSCAFG00020018901RRP1B7642.265Canis_lupus_dingo
ENSTNIG00000005053rrp15547.262ENSCHIG00000020948RRP17546.667Capra_hircus
ENSTNIG00000005053rrp16948.276ENSCHIG00000021519RRP1B6848.276Capra_hircus
ENSTNIG00000005053rrp15447.778ENSTSYG00000012831RRP17646.459Carlito_syrichta
ENSTNIG00000005053rrp18043.056ENSCPOG00000002396RRP1B8338.312Cavia_porcellus
ENSTNIG00000005053rrp15450.147ENSCPOG00000038986RRP17549.853Cavia_porcellus
ENSTNIG00000005053rrp17052.174ENSCCAG00000029384RRP1B5952.174Cebus_capucinus
ENSTNIG00000005053rrp15450.000ENSCCAG00000029828RRP17448.688Cebus_capucinus
ENSTNIG00000005053rrp16955.056ENSCATG00000017423RRP1B5855.056Cercocebus_atys
ENSTNIG00000005053rrp15448.555ENSCATG00000015632RRP19842.348Cercocebus_atys
ENSTNIG00000005053rrp15450.296ENSCLAG00000011639RRP19742.664Chinchilla_lanigera
ENSTNIG00000005053rrp16850.980ENSCLAG00000005622RRP1B5848.649Chinchilla_lanigera
ENSTNIG00000005053rrp16956.180ENSCSAG00000007961RRP1B7656.180Chlorocebus_sabaeus
ENSTNIG00000005053rrp15148.916ENSCSAG00000007936RRP19748.318Chlorocebus_sabaeus
ENSTNIG00000005053rrp15338.602ENSCHOG00000002426-5437.386Choloepus_hoffmanni
ENSTNIG00000005053rrp17153.352ENSCPBG00000010310RRP1B6447.632Chrysemys_picta_bellii
ENSTNIG00000005053rrp15634.393ENSCING00000003304-7634.682Ciona_intestinalis
ENSTNIG00000005053rrp17055.682ENSCANG00000040952RRP1B5955.682Colobus_angolensis_palliatus
ENSTNIG00000005053rrp17045.833ENSCGRG00001010889-6145.833Cricetulus_griseus_chok1gshd
ENSTNIG00000005053rrp17045.833ENSCGRG00001023882-6060.294Cricetulus_griseus_chok1gshd
ENSTNIG00000005053rrp15450.578ENSCGRG00001011920Rrp19842.920Cricetulus_griseus_chok1gshd
ENSTNIG00000005053rrp15450.578ENSCGRG00000008915Rrp19842.920Cricetulus_griseus_crigri
ENSTNIG00000005053rrp16345.833ENSCGRG00000001553Rrp1b5645.833Cricetulus_griseus_crigri
ENSTNIG00000005053rrp16763.764ENSCSEG00000020711-9346.729Cynoglossus_semilaevis
ENSTNIG00000005053rrp15660.340ENSCVAG00000017568-8959.207Cyprinodon_variegatus
ENSTNIG00000005053rrp16857.186ENSDARG00000103337rrp17252.941Danio_rerio
ENSTNIG00000005053rrp18753.933ENSDNOG00000032774RRP1B7653.933Dasypus_novemcinctus
ENSTNIG00000005053rrp15449.138ENSDNOG00000019880RRP17548.521Dasypus_novemcinctus
ENSTNIG00000005053rrp15749.462ENSDORG00000005496Rrp1b5349.462Dipodomys_ordii
ENSTNIG00000005053rrp16763.462ENSETEG00000019489RRP1B6763.462Echinops_telfairi
ENSTNIG00000005053rrp15142.453ENSETEG00000002963-7141.379Echinops_telfairi
ENSTNIG00000005053rrp18143.869ENSEASG00005001687RRP1B5947.191Equus_asinus_asinus
ENSTNIG00000005053rrp16941.096ENSEASG00005001673RRP19442.081Equus_asinus_asinus
ENSTNIG00000005053rrp16943.311ENSECAG00000015703RRP19442.760Equus_caballus
ENSTNIG00000005053rrp18143.597ENSECAG00000018018RRP1B5947.191Equus_caballus
ENSTNIG00000005053rrp17357.252ENSELUG00000015885-9749.785Esox_lucius
ENSTNIG00000005053rrp15549.560ENSFCAG00000008434RRP19242.989Felis_catus
ENSTNIG00000005053rrp17147.368ENSFCAG00000010272RRP1B7847.368Felis_catus
ENSTNIG00000005053rrp16347.387ENSFALG00000002024RRP1B5847.931Ficedula_albicollis
ENSTNIG00000005053rrp16744.231ENSFDAG00000010899RRP1B5944.231Fukomys_damarensis
ENSTNIG00000005053rrp17443.430ENSFDAG00000013728RRP19742.982Fukomys_damarensis
ENSTNIG00000005053rrp16870.149ENSGMOG00000001953-6370.149Gadus_morhua
ENSTNIG00000005053rrp17550.000ENSGALG00000035696RRP1B6550.000Gallus_gallus
ENSTNIG00000005053rrp19753.659ENSGACG00000001438rrp19753.105Gasterosteus_aculeatus
ENSTNIG00000005053rrp17652.778ENSGAGG00000000375RRP1B7146.000Gopherus_agassizii
ENSTNIG00000005053rrp17051.685ENSGGOG00000012069RRP1B5951.685Gorilla_gorilla
ENSTNIG00000005053rrp15450.291ENSGGOG00000000173RRP18744.471Gorilla_gorilla
ENSTNIG00000005053rrp15661.878ENSHBUG00000003766-5553.333Haplochromis_burtoni
ENSTNIG00000005053rrp15450.147ENSHGLG00000017085RRP17149.563Heterocephalus_glaber_female
ENSTNIG00000005053rrp18141.873ENSHGLG00000004968RRP1B7845.283Heterocephalus_glaber_female
ENSTNIG00000005053rrp17137.667ENSHGLG00100002232RRP1B6245.283Heterocephalus_glaber_male
ENSTNIG00000005053rrp17259.375ENSHCOG00000018388-5659.375Hippocampus_comes
ENSTNIG00000005053rrp17553.083ENSIPUG00000000673-7152.406Ictalurus_punctatus
ENSTNIG00000005053rrp15449.112ENSSTOG00000011116RRP17748.943Ictidomys_tridecemlineatus
ENSTNIG00000005053rrp16944.681ENSSTOG00000011790RRP1B6044.681Ictidomys_tridecemlineatus
ENSTNIG00000005053rrp15450.453ENSJJAG00000018886Rrp18844.417Jaculus_jaculus
ENSTNIG00000005053rrp17842.216ENSJJAG00000021279Rrp1b6250.495Jaculus_jaculus
ENSTNIG00000005053rrp17160.417ENSKMAG00000005539rrp19646.402Kryptolebias_marmoratus
ENSTNIG00000005053rrp15663.733ENSLBEG00000021417RRP19163.612Labrus_bergylta
ENSTNIG00000005053rrp17849.046ENSLACG00000017332-6347.814Latimeria_chalumnae
ENSTNIG00000005053rrp16960.172ENSLOCG00000004064-7956.627Lepisosteus_oculatus
ENSTNIG00000005053rrp15446.218ENSLAFG00000022901RRP19839.440Loxodonta_africana
ENSTNIG00000005053rrp16640.909ENSLAFG00000000766RRP1B9539.810Loxodonta_africana
ENSTNIG00000005053rrp17150.000ENSMFAG00000039152RRP1B6050.000Macaca_fascicularis
ENSTNIG00000005053rrp15450.291ENSMFAG00000003202RRP17450.292Macaca_fascicularis
ENSTNIG00000005053rrp15450.000ENSMMUG00000012304RRP17450.000Macaca_mulatta
ENSTNIG00000005053rrp16659.016ENSMMUG00000000104RRP1B5559.016Macaca_mulatta
ENSTNIG00000005053rrp17150.000ENSMNEG00000034269RRP1B6050.000Macaca_nemestrina
ENSTNIG00000005053rrp15449.709ENSMNEG00000031210RRP18445.255Macaca_nemestrina
ENSTNIG00000005053rrp16355.056ENSMLEG00000040044RRP1B5655.056Mandrillus_leucophaeus
ENSTNIG00000005053rrp17563.359ENSMAMG00000007131-5656.009Mastacembelus_armatus
ENSTNIG00000005053rrp17547.848ENSMGAG00000014591RRP1B6447.674Meleagris_gallopavo
ENSTNIG00000005053rrp15440.698ENSMAUG00000017653Rrp19838.581Mesocricetus_auratus
ENSTNIG00000005053rrp16650.526ENSMAUG00000021508Rrp1b5850.526Mesocricetus_auratus
ENSTNIG00000005053rrp17548.113ENSMICG00000004686RRP1B6648.113Microcebus_murinus
ENSTNIG00000005053rrp15449.275ENSMICG00000004700RRP19743.213Microcebus_murinus
ENSTNIG00000005053rrp16946.392ENSMOCG00000001117Rrp1b6046.392Microtus_ochrogaster
ENSTNIG00000005053rrp15763.260ENSMMOG00000019175rrp19062.222Mola_mola
ENSTNIG00000005053rrp16947.191ENSMODG00000021033RRP1B6747.191Monodelphis_domestica
ENSTNIG00000005053rrp15450.442ENSMODG00000021036-5049.271Monodelphis_domestica
ENSTNIG00000005053rrp15768.539ENSMALG00000010310rrp19266.854Monopterus_albus
ENSTNIG00000005053rrp16749.485MGP_CAROLIEiJ_G0021376Rrp1b5857.353Mus_caroli
ENSTNIG00000005053rrp15443.609MGP_CAROLIEiJ_G0015508Rrp15856.667Mus_caroli
ENSTNIG00000005053rrp15456.667ENSMUSG00000061032Rrp15856.667Mus_musculus
ENSTNIG00000005053rrp16848.039ENSMUSG00000058392Rrp1b5858.824Mus_musculus
ENSTNIG00000005053rrp17049.485MGP_PahariEiJ_G0023695Rrp1b5857.353Mus_pahari
ENSTNIG00000005053rrp15056.667MGP_SPRETEiJ_G0016321Rrp15856.667Mus_spretus
ENSTNIG00000005053rrp17147.170MGP_SPRETEiJ_G0022290Rrp1b5858.824Mus_spretus
ENSTNIG00000005053rrp15550.179ENSMPUG00000009826RRP17754.936Mustela_putorius_furo
ENSTNIG00000005053rrp18943.989ENSMLUG00000007738RRP1B5947.727Myotis_lucifugus
ENSTNIG00000005053rrp17045.192ENSNGAG00000021073Rrp1b6045.192Nannospalax_galili
ENSTNIG00000005053rrp15450.581ENSNLEG00000034734RRP17350.440Nomascus_leucogenys
ENSTNIG00000005053rrp17056.180ENSNLEG00000001490RRP1B6156.180Nomascus_leucogenys
ENSTNIG00000005053rrp16563.462ENSMEUG00000003226-6463.462Notamacropus_eugenii
ENSTNIG00000005053rrp15444.109ENSOPRG00000001319RRP19244.214Ochotona_princeps
ENSTNIG00000005053rrp19734.632ENSODEG00000013177RRP1B6846.316Octodon_degus
ENSTNIG00000005053rrp16666.113ENSONIG00000004264rrp17956.091Oreochromis_niloticus
ENSTNIG00000005053rrp15449.560ENSOANG00000006472-8948.997Ornithorhynchus_anatinus
ENSTNIG00000005053rrp17047.191ENSOANG00000006470RRP1B6747.191Ornithorhynchus_anatinus
ENSTNIG00000005053rrp15946.739ENSOCUG00000025931RRP1B5646.739Oryctolagus_cuniculus
ENSTNIG00000005053rrp16680.392ENSORLG00020007199-5080.392Oryzias_latipes_hni
ENSTNIG00000005053rrp17163.043ENSORLG00015004425-5164.444Oryzias_latipes_hsok
ENSTNIG00000005053rrp16583.333ENSOMEG00000016910-5277.358Oryzias_melastigma
ENSTNIG00000005053rrp15450.000ENSOGAG00000006105RRP17749.275Otolemur_garnettii
ENSTNIG00000005053rrp19636.570ENSOGAG00000009872RRP1B9736.876Otolemur_garnettii
ENSTNIG00000005053rrp17040.446ENSOARG00000011314RRP1B6748.276Ovis_aries
ENSTNIG00000005053rrp15148.457ENSOARG00000011434RRP17247.256Ovis_aries
ENSTNIG00000005053rrp16351.685ENSPPAG00000035319RRP1B5651.685Pan_paniscus
ENSTNIG00000005053rrp15450.000ENSPPAG00000029050RRP18744.811Pan_paniscus
ENSTNIG00000005053rrp18747.368ENSPPRG00000010356RRP1B7847.368Panthera_pardus
ENSTNIG00000005053rrp15548.997ENSPPRG00000010656RRP17749.267Panthera_pardus
ENSTNIG00000005053rrp16847.368ENSPTIG00000016894RRP1B9234.083Panthera_tigris_altaica
ENSTNIG00000005053rrp15143.887ENSPTIG00000019473RRP17343.260Panthera_tigris_altaica
ENSTNIG00000005053rrp15450.291ENSPTRG00000013962RRP18745.047Pan_troglodytes
ENSTNIG00000005053rrp17051.685ENSPTRG00000013958RRP1B5951.685Pan_troglodytes
ENSTNIG00000005053rrp16955.056ENSPANG00000011090RRP1B5855.056Papio_anubis
ENSTNIG00000005053rrp15448.844ENSPANG00000015097RRP17450.000Papio_anubis
ENSTNIG00000005053rrp19562.651ENSPKIG00000003422-7462.651Paramormyrops_kingsleyae
ENSTNIG00000005053rrp17552.473ENSPSIG00000008152RRP1B7046.771Pelodiscus_sinensis
ENSTNIG00000005053rrp15752.222ENSPMGG00000007512-8852.222Periophthalmus_magnuspinnatus
ENSTNIG00000005053rrp15449.133ENSPEMG00000018421Rrp19143.427Peromyscus_maniculatus_bairdii
ENSTNIG00000005053rrp17148.039ENSPEMG00000022490Rrp1b7848.039Peromyscus_maniculatus_bairdii
ENSTNIG00000005053rrp15550.145ENSPCIG00000015523-7548.138Phascolarctos_cinereus
ENSTNIG00000005053rrp19446.944ENSPCIG00000015513RRP1B7061.538Phascolarctos_cinereus
ENSTNIG00000005053rrp18260.920ENSPFOG00000007424-6660.920Poecilia_formosa
ENSTNIG00000005053rrp15763.966ENSPLAG00000016684-5162.570Poecilia_latipinna
ENSTNIG00000005053rrp18164.246ENSPMEG00000007042-6062.570Poecilia_mexicana
ENSTNIG00000005053rrp19162.849ENSPREG00000015673-6461.453Poecilia_reticulata
ENSTNIG00000005053rrp17056.180ENSPPYG00000011470RRP1B5956.180Pongo_abelii
ENSTNIG00000005053rrp15450.291ENSPPYG00000011474RRP18745.283Pongo_abelii
ENSTNIG00000005053rrp15447.839ENSPCOG00000017706RRP17747.839Propithecus_coquereli
ENSTNIG00000005053rrp17052.809ENSPCOG00000017927RRP1B7352.809Propithecus_coquereli
ENSTNIG00000005053rrp17044.509ENSRNOG00000001194Rrp1b6144.330Rattus_norvegicus
ENSTNIG00000005053rrp15449.133ENSRNOG00000001203Rrp17849.280Rattus_norvegicus
ENSTNIG00000005053rrp15449.563ENSRBIG00000032082RRP17449.133Rhinopithecus_bieti
ENSTNIG00000005053rrp17251.429ENSRBIG00000041689RRP1B6051.429Rhinopithecus_bieti
ENSTNIG00000005053rrp15449.563ENSRROG00000039799RRP17449.133Rhinopithecus_roxellana
ENSTNIG00000005053rrp17251.429ENSRROG00000031499RRP1B6151.429Rhinopithecus_roxellana
ENSTNIG00000005053rrp15452.083ENSSBOG00000034689RRP19743.231Saimiri_boliviensis_boliviensis
ENSTNIG00000005053rrp16947.592ENSSHAG00000017789RRP1B7047.191Sarcophilus_harrisii
ENSTNIG00000005053rrp16658.416ENSSFOG00015003932-6058.416Scleropages_formosus
ENSTNIG00000005053rrp17367.647ENSSMAG00000016847-9261.440Scophthalmus_maximus
ENSTNIG00000005053rrp17071.038ENSSDUG00000000551-5959.773Seriola_dumerili
ENSTNIG00000005053rrp17070.845ENSSLDG00000002538-5562.500Seriola_lalandi_dorsalis
ENSTNIG00000005053rrp17640.876ENSSARG00000003108-5447.191Sorex_araneus
ENSTNIG00000005053rrp16950.000ENSSPUG00000002834RRP1B5850.716Sphenodon_punctatus
ENSTNIG00000005053rrp15448.824ENSSSCG00000037061RRP19741.957Sus_scrofa
ENSTNIG00000005053rrp16665.385ENSSSCG00000021698RRP1B6065.385Sus_scrofa
ENSTNIG00000005053rrp16649.201ENSTGUG00000005926RRP1B5949.026Taeniopygia_guttata
ENSTNIG00000005053rrp15675.623ENSTRUG00000017592rrp110075.630Takifugu_rubripes
ENSTNIG00000005053rrp19033.841ENSTBEG00000000422RRP1B9432.428Tupaia_belangeri
ENSTNIG00000005053rrp17044.828ENSTTRG00000000723RRP1B6144.828Tursiops_truncatus
ENSTNIG00000005053rrp17048.889ENSUAMG00000026765RRP1B9534.821Ursus_americanus
ENSTNIG00000005053rrp19035.951ENSUMAG00000025510RRP1B9250.575Ursus_maritimus
ENSTNIG00000005053rrp17740.663ENSVVUG00000024509RRP1B7540.625Vulpes_vulpes
ENSTNIG00000005053rrp16948.580ENSXETG00000013683rrp1b9738.599Xenopus_tropicalis
ENSTNIG00000005053rrp17680.392ENSXMAG00000023123-6180.392Xiphophorus_maculatus

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