EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000005074 (Gene tree)
Gene ID: -
Gene Symbol: cwc22
Alias: fb13g08|fi16b02|wu:fb13g08|wu:fi16b02|zgc:153452
Full Name: CWC22 spliceosome-associated protein homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 7219 bases
Position: chr2:9546410-9553628
Accession: ZDB-GENE-060929-452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007739	MA3	PF02847.17	3.5e-18	1	1
ENSTNIP00000001713	MA3	PF02847.17	3.7e-18	1	1
ENSTNIP00000001713	MIF4G	PF02854.19	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007900	-	2289	-	ENSTNIP00000007739	763 (aa)	-	H3CHL1
ENSTNIT00000003043	-	2379	-	ENSTNIP00000001713	793 (aa)	-	H3C0E7

Gene Model

Click here to download ENSTNIG00000005074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005074	cwc22	87	73.353	ENSG00000163510	CWC22	75	79.860	Homo_sapiens
ENSTNIG00000005074	cwc22	86	76.788	ENSAPOG00000004200	cwc22	76	76.788	Acanthochromis_polyacanthus
ENSTNIG00000005074	cwc22	87	74.737	ENSAMEG00000011004	CWC22	62	80.035	Ailuropoda_melanoleuca
ENSTNIG00000005074	cwc22	77	87.543	ENSACIG00000020055	cwc22	75	79.854	Amphilophus_citrinellus
ENSTNIG00000005074	cwc22	86	80.263	ENSATEG00000005176	cwc22	73	73.733	Anabas_testudineus
ENSTNIG00000005074	cwc22	73	80.354	ENSACAG00000009438	CWC22	62	79.115	Anolis_carolinensis
ENSTNIG00000005074	cwc22	77	78.475	ENSANAG00000028324	CWC22	62	79.510	Aotus_nancymaae
ENSTNIG00000005074	cwc22	81	78.176	ENSACLG00000025447	cwc22	80	88.455	Astatotilapia_calliptera
ENSTNIG00000005074	cwc22	57	90.090	ENSAMXG00000014957	cwc22	54	90.000	Astyanax_mexicanus
ENSTNIG00000005074	cwc22	86	73.605	ENSBTAG00000021726	CWC22	62	79.685	Bos_taurus
ENSTNIG00000005074	cwc22	71	54.364	WBGene00002957	let-858	60	52.878	Caenorhabditis_elegans
ENSTNIG00000005074	cwc22	88	73.630	ENSCAFG00000014160	CWC22	62	79.860	Canis_familiaris
ENSTNIG00000005074	cwc22	85	75.576	ENSCAFG00020007223	CWC22	67	82.595	Canis_lupus_dingo
ENSTNIG00000005074	cwc22	86	74.057	ENSCHIG00000017150	CWC22	62	80.035	Capra_hircus
ENSTNIG00000005074	cwc22	86	74.584	ENSTSYG00000000218	-	62	79.860	Carlito_syrichta
ENSTNIG00000005074	cwc22	89	64.255	ENSTSYG00000026635	-	63	70.650	Carlito_syrichta
ENSTNIG00000005074	cwc22	80	68.189	ENSTSYG00000028686	-	64	68.476	Carlito_syrichta
ENSTNIG00000005074	cwc22	77	70.756	ENSTSYG00000035591	-	69	71.728	Carlito_syrichta
ENSTNIG00000005074	cwc22	77	74.281	ENSCAPG00000002064	CWC22	65	74.606	Cavia_aperea
ENSTNIG00000005074	cwc22	87	74.286	ENSCPOG00000007492	CWC22	63	79.685	Cavia_porcellus
ENSTNIG00000005074	cwc22	77	73.729	ENSCCAG00000021239	CWC22	61	74.256	Cebus_capucinus
ENSTNIG00000005074	cwc22	87	73.503	ENSCATG00000035788	CWC22	62	79.860	Cercocebus_atys
ENSTNIG00000005074	cwc22	86	74.924	ENSCLAG00000011118	CWC22	62	79.825	Chinchilla_lanigera
ENSTNIG00000005074	cwc22	87	73.472	ENSCSAG00000012925	CWC22	62	79.860	Chlorocebus_sabaeus
ENSTNIG00000005074	cwc22	86	65.257	ENSCHOG00000006362	CWC22	62	70.753	Choloepus_hoffmanni
ENSTNIG00000005074	cwc22	79	78.325	ENSCPBG00000001765	CWC22	61	81.705	Chrysemys_picta_bellii
ENSTNIG00000005074	cwc22	73	65.841	ENSCING00000008865	-	71	65.845	Ciona_intestinalis
ENSTNIG00000005074	cwc22	72	65.880	ENSCSAVG00000003537	-	78	73.039	Ciona_savignyi
ENSTNIG00000005074	cwc22	88	73.254	ENSCANG00000013762	CWC22	62	79.860	Colobus_angolensis_palliatus
ENSTNIG00000005074	cwc22	87	73.739	ENSCGRG00001017005	-	76	80.639	Cricetulus_griseus_chok1gshd
ENSTNIG00000005074	cwc22	87	73.739	ENSCGRG00000001934	-	61	80.639	Cricetulus_griseus_crigri
ENSTNIG00000005074	cwc22	82	70.588	ENSCSEG00000005257	cwc22	61	79.078	Cynoglossus_semilaevis
ENSTNIG00000005074	cwc22	75	87.716	ENSCVAG00000009836	cwc22	60	80.161	Cyprinodon_variegatus
ENSTNIG00000005074	cwc22	76	83.618	ENSDARG00000014008	cwc22	63	79.173	Danio_rerio
ENSTNIG00000005074	cwc22	86	74.433	ENSDNOG00000003020	-	61	80.247	Dasypus_novemcinctus
ENSTNIG00000005074	cwc22	79	59.672	ENSDNOG00000032640	-	77	62.234	Dasypus_novemcinctus
ENSTNIG00000005074	cwc22	86	74.625	ENSDORG00000011483	-	61	80.354	Dipodomys_ordii
ENSTNIG00000005074	cwc22	77	67.174	ENSETEG00000013355	CWC22	78	68.007	Echinops_telfairi
ENSTNIG00000005074	cwc22	86	74.242	ENSEASG00005022287	CWC22	62	79.685	Equus_asinus_asinus
ENSTNIG00000005074	cwc22	86	74.394	ENSECAG00000010769	CWC22	62	79.685	Equus_caballus
ENSTNIG00000005074	cwc22	77	78.214	ENSEEUG00000005336	CWC22	54	75.627	Erinaceus_europaeus
ENSTNIG00000005074	cwc22	75	83.737	ENSELUG00000010536	cwc22	90	78.087	Esox_lucius
ENSTNIG00000005074	cwc22	86	75.113	ENSFCAG00000018982	CWC22	62	80.035	Felis_catus
ENSTNIG00000005074	cwc22	81	76.337	ENSFALG00000003495	CWC22	60	79.857	Ficedula_albicollis
ENSTNIG00000005074	cwc22	86	74.962	ENSFDAG00000010857	CWC22	62	79.474	Fukomys_damarensis
ENSTNIG00000005074	cwc22	73	88.869	ENSFHEG00000009620	cwc22	67	79.532	Fundulus_heteroclitus
ENSTNIG00000005074	cwc22	74	83.598	ENSGMOG00000009084	cwc22	89	83.156	Gadus_morhua
ENSTNIG00000005074	cwc22	73	81.115	ENSGALG00000009001	CWC22	59	80.576	Gallus_gallus
ENSTNIG00000005074	cwc22	73	88.750	ENSGAFG00000021155	cwc22	67	87.852	Gambusia_affinis
ENSTNIG00000005074	cwc22	77	86.201	ENSGACG00000002071	cwc22	67	87.922	Gasterosteus_aculeatus
ENSTNIG00000005074	cwc22	78	79.195	ENSGAGG00000013471	CWC22	62	81.371	Gopherus_agassizii
ENSTNIG00000005074	cwc22	87	73.284	ENSGGOG00000012484	CWC22	62	79.860	Gorilla_gorilla
ENSTNIG00000005074	cwc22	91	67.970	ENSHBUG00000010504	cwc22	61	88.029	Haplochromis_burtoni
ENSTNIG00000005074	cwc22	87	74.398	ENSHGLG00000005692	CWC22	62	80.364	Heterocephalus_glaber_female
ENSTNIG00000005074	cwc22	87	74.398	ENSHGLG00100016497	CWC22	78	80.364	Heterocephalus_glaber_male
ENSTNIG00000005074	cwc22	74	85.435	ENSHCOG00000004206	cwc22	66	85.080	Hippocampus_comes
ENSTNIG00000005074	cwc22	74	85.080	ENSIPUG00000005831	cwc22	59	85.587	Ictalurus_punctatus
ENSTNIG00000005074	cwc22	86	74.057	ENSSTOG00000009788	CWC22	61	79.225	Ictidomys_tridecemlineatus
ENSTNIG00000005074	cwc22	78	78.595	ENSJJAG00000017012	-	61	80.177	Jaculus_jaculus
ENSTNIG00000005074	cwc22	74	88.810	ENSKMAG00000005228	cwc22	55	88.632	Kryptolebias_marmoratus
ENSTNIG00000005074	cwc22	88	76.081	ENSLBEG00000020518	cwc22	69	79.009	Labrus_bergylta
ENSTNIG00000005074	cwc22	73	85.278	ENSLOCG00000006456	cwc22	58	84.725	Lepisosteus_oculatus
ENSTNIG00000005074	cwc22	77	79.019	ENSLAFG00000014802	CWC22	61	80.070	Loxodonta_africana
ENSTNIG00000005074	cwc22	87	73.724	ENSMFAG00000000590	CWC22	66	79.860	Macaca_fascicularis
ENSTNIG00000005074	cwc22	77	78.535	ENSMMUG00000020642	CWC22	64	79.860	Macaca_mulatta
ENSTNIG00000005074	cwc22	87	73.724	ENSMNEG00000034567	CWC22	62	79.860	Macaca_nemestrina
ENSTNIG00000005074	cwc22	88	73.214	ENSMLEG00000042344	CWC22	62	79.860	Mandrillus_leucophaeus
ENSTNIG00000005074	cwc22	89	74.168	ENSMAMG00000018888	cwc22	72	74.428	Mastacembelus_armatus
ENSTNIG00000005074	cwc22	82	74.610	ENSMZEG00005021449	cwc22	61	82.080	Maylandia_zebra
ENSTNIG00000005074	cwc22	76	79.102	ENSMGAG00000009220	CWC22	61	80.396	Meleagris_gallopavo
ENSTNIG00000005074	cwc22	62	81.002	ENSMAUG00000016154	-	62	80.544	Mesocricetus_auratus
ENSTNIG00000005074	cwc22	86	73.123	ENSMICG00000016919	CWC22	63	79.371	Microcebus_murinus
ENSTNIG00000005074	cwc22	88	77.390	ENSMMOG00000019720	cwc22	94	81.743	Mola_mola
ENSTNIG00000005074	cwc22	76	80.484	ENSMODG00000010233	-	61	81.383	Monodelphis_domestica
ENSTNIG00000005074	cwc22	72	75.228	ENSMODG00000003711	-	97	75.046	Monodelphis_domestica
ENSTNIG00000005074	cwc22	72	75.592	ENSMODG00000020117	-	97	75.410	Monodelphis_domestica
ENSTNIG00000005074	cwc22	88	71.935	MGP_CAROLIEiJ_G0023696	-	75	80.674	Mus_caroli
ENSTNIG00000005074	cwc22	88	72.889	ENSMUSG00000027014	Cwc22	76	80.674	Mus_musculus
ENSTNIG00000005074	cwc22	76	77.966	ENSMUSG00000096729	Gm13695	67	79.086	Mus_musculus
ENSTNIG00000005074	cwc22	76	77.966	ENSMUSG00000079247	Gm13691	67	79.086	Mus_musculus
ENSTNIG00000005074	cwc22	76	77.966	ENSMUSG00000094125	Gm13698	67	79.086	Mus_musculus
ENSTNIG00000005074	cwc22	76	77.966	ENSMUSG00000095824	Gm13697	67	79.086	Mus_musculus
ENSTNIG00000005074	cwc22	76	77.966	ENSMUSG00000096337	Gm13694	67	79.086	Mus_musculus
ENSTNIG00000005074	cwc22	76	77.966	ENSMUSG00000096484	Gm13696	67	79.086	Mus_musculus
ENSTNIG00000005074	cwc22	76	77.966	ENSMUSG00000094336	Gm13693	67	79.086	Mus_musculus
ENSTNIG00000005074	cwc22	88	71.471	MGP_PahariEiJ_G0025147	-	75	80.496	Mus_pahari
ENSTNIG00000005074	cwc22	86	74.622	ENSMPUG00000002432	CWC22	62	80.035	Mustela_putorius_furo
ENSTNIG00000005074	cwc22	75	80.174	ENSMLUG00000013437	-	67	80.035	Myotis_lucifugus
ENSTNIG00000005074	cwc22	86	72.673	ENSMLUG00000024966	-	70	77.933	Myotis_lucifugus
ENSTNIG00000005074	cwc22	98	59.826	ENSNGAG00000013881	-	77	78.707	Nannospalax_galili
ENSTNIG00000005074	cwc22	87	72.985	ENSNLEG00000006248	CWC22	62	79.860	Nomascus_leucogenys
ENSTNIG00000005074	cwc22	75	73.298	ENSMEUG00000011026	CWC22	94	76.340	Notamacropus_eugenii
ENSTNIG00000005074	cwc22	62	80.585	ENSOPRG00000007844	CWC22	58	79.707	Ochotona_princeps
ENSTNIG00000005074	cwc22	68	80.230	ENSODEG00000007673	CWC22	82	79.808	Octodon_degus
ENSTNIG00000005074	cwc22	62	75.000	ENSODEG00000005934	-	72	74.947	Octodon_degus
ENSTNIG00000005074	cwc22	86	74.024	ENSOANG00000008649	CWC22	68	81.579	Ornithorhynchus_anatinus
ENSTNIG00000005074	cwc22	72	88.909	ENSORLG00000010538	cwc22	70	79.678	Oryzias_latipes
ENSTNIG00000005074	cwc22	72	88.909	ENSORLG00020015117	cwc22	70	79.386	Oryzias_latipes_hni
ENSTNIG00000005074	cwc22	72	88.929	ENSORLG00015018073	cwc22	70	77.443	Oryzias_latipes_hsok
ENSTNIG00000005074	cwc22	75	86.851	ENSOMEG00000015199	cwc22	59	87.411	Oryzias_melastigma
ENSTNIG00000005074	cwc22	86	73.946	ENSOGAG00000015287	CWC22	61	79.335	Otolemur_garnettii
ENSTNIG00000005074	cwc22	86	74.057	ENSOARG00000016905	CWC22	62	79.510	Ovis_aries
ENSTNIG00000005074	cwc22	87	73.204	ENSPPAG00000027833	CWC22	62	79.685	Pan_paniscus
ENSTNIG00000005074	cwc22	86	75.113	ENSPPRG00000001389	CWC22	62	80.035	Panthera_pardus
ENSTNIG00000005074	cwc22	86	75.113	ENSPTIG00000019139	CWC22	62	80.035	Panthera_tigris_altaica
ENSTNIG00000005074	cwc22	87	73.284	ENSPTRG00000012698	CWC22	62	79.860	Pan_troglodytes
ENSTNIG00000005074	cwc22	87	73.503	ENSPANG00000018976	CWC22	62	79.860	Papio_anubis
ENSTNIG00000005074	cwc22	74	84.276	ENSPKIG00000021346	cwc22	64	80.071	Paramormyrops_kingsleyae
ENSTNIG00000005074	cwc22	74	82.238	ENSPSIG00000008632	CWC22	61	81.640	Pelodiscus_sinensis
ENSTNIG00000005074	cwc22	71	80.817	ENSPMGG00000020129	cwc22	57	78.510	Periophthalmus_magnuspinnatus
ENSTNIG00000005074	cwc22	78	73.892	ENSPEMG00000023936	-	79	76.502	Peromyscus_maniculatus_bairdii
ENSTNIG00000005074	cwc22	83	69.109	ENSPMAG00000005914	cwc22	65	78.131	Petromyzon_marinus
ENSTNIG00000005074	cwc22	76	80.274	ENSPCIG00000009903	-	77	80.526	Phascolarctos_cinereus
ENSTNIG00000005074	cwc22	74	88.475	ENSPFOG00000015025	cwc22	83	81.435	Poecilia_formosa
ENSTNIG00000005074	cwc22	74	88.475	ENSPLAG00000021405	cwc22	62	80.157	Poecilia_latipinna
ENSTNIG00000005074	cwc22	74	88.298	ENSPMEG00000007850	cwc22	55	88.099	Poecilia_mexicana
ENSTNIG00000005074	cwc22	74	83.837	ENSPREG00000004312	cwc22	64	84.192	Poecilia_reticulata
ENSTNIG00000005074	cwc22	87	73.353	ENSPPYG00000012986	CWC22	62	79.860	Pongo_abelii
ENSTNIG00000005074	cwc22	77	76.988	ENSPCAG00000011882	CWC22	62	78.938	Procavia_capensis
ENSTNIG00000005074	cwc22	76	78.765	ENSPCOG00000010195	CWC22	58	77.660	Propithecus_coquereli
ENSTNIG00000005074	cwc22	77	79.387	ENSPVAG00000011497	CWC22	62	79.649	Pteropus_vampyrus
ENSTNIG00000005074	cwc22	81	75.635	ENSPNYG00000010435	cwc22	79	85.258	Pundamilia_nyererei
ENSTNIG00000005074	cwc22	74	76.512	ENSRNOG00000012651	Cwc22	60	77.020	Rattus_norvegicus
ENSTNIG00000005074	cwc22	77	73.639	ENSRNOG00000038322	LOC500684	59	76.812	Rattus_norvegicus
ENSTNIG00000005074	cwc22	88	69.792	ENSRBIG00000036751	CWC22	61	76.883	Rhinopithecus_bieti
ENSTNIG00000005074	cwc22	88	73.214	ENSRROG00000037520	CWC22	62	79.860	Rhinopithecus_roxellana
ENSTNIG00000005074	cwc22	77	76.610	ENSSBOG00000021683	CWC22	61	77.758	Saimiri_boliviensis_boliviensis
ENSTNIG00000005074	cwc22	77	78.487	ENSSHAG00000016596	-	64	80.174	Sarcophilus_harrisii
ENSTNIG00000005074	cwc22	86	63.182	ENSSHAG00000004040	-	76	69.627	Sarcophilus_harrisii
ENSTNIG00000005074	cwc22	68	81.081	ENSSFOG00015010559	cwc22	62	82.819	Scleropages_formosus
ENSTNIG00000005074	cwc22	75	84.429	ENSSMAG00000004724	cwc22	56	85.258	Scophthalmus_maximus
ENSTNIG00000005074	cwc22	76	87.329	ENSSDUG00000010656	cwc22	68	81.910	Seriola_dumerili
ENSTNIG00000005074	cwc22	74	88.830	ENSSLDG00000023157	cwc22	79	88.790	Seriola_lalandi_dorsalis
ENSTNIG00000005074	cwc22	77	76.451	ENSSPUG00000006395	CWC22	64	78.032	Sphenodon_punctatus
ENSTNIG00000005074	cwc22	77	86.971	ENSSPAG00000008746	cwc22	67	79.651	Stegastes_partitus
ENSTNIG00000005074	cwc22	86	73.112	ENSSSCG00000016008	CWC22	62	79.685	Sus_scrofa
ENSTNIG00000005074	cwc22	79	76.277	ENSTGUG00000009340	-	64	80.142	Taeniopygia_guttata
ENSTNIG00000005074	cwc22	88	84.615	ENSTRUG00000014411	cwc22	72	85.859	Takifugu_rubripes
ENSTNIG00000005074	cwc22	81	60.000	ENSTBEG00000014539	CWC22	51	76.364	Tupaia_belangeri
ENSTNIG00000005074	cwc22	77	78.680	ENSTTRG00000012142	CWC22	62	79.371	Tursiops_truncatus
ENSTNIG00000005074	cwc22	80	80.882	ENSUAMG00000010342	CWC22	59	82.595	Ursus_americanus
ENSTNIG00000005074	cwc22	87	74.586	ENSUMAG00000016730	CWC22	62	80.035	Ursus_maritimus
ENSTNIG00000005074	cwc22	86	74.169	ENSVPAG00000008565	CWC22	66	76.557	Vicugna_pacos
ENSTNIG00000005074	cwc22	86	73.263	ENSVVUG00000009738	CWC22	62	79.860	Vulpes_vulpes
ENSTNIG00000005074	cwc22	78	75.079	ENSXETG00000014099	cwc22	71	81.705	Xenopus_tropicalis
ENSTNIG00000005074	cwc22	74	88.475	ENSXMAG00000013201	cwc22	63	79.685	Xiphophorus_maculatus