EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000005369 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Minus strand
Length
3759 bases
Position
chrUn_random:10793965-10797723
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000008052RRM_1PF00076.221.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000008215-648-ENSTNIP00000008052215 (aa)-H3CIH4
Gene Model
Click here to download ENSTNIG00000005369's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005369's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000005369pabpn15035.398ENSTNIG00000004241-7435.398
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000005369pabpn18781.152ENSG00000258643BCL2L2-PABPN15781.152Homo_sapiens
ENSTNIG00000005369pabpn19379.710ENSG00000100836PABPN19382.278Homo_sapiens
ENSTNIG00000005369pabpn19397.512ENSAPOG00000016425pabpn19293.023Acanthochromis_polyacanthus
ENSTNIG00000005369pabpn18781.152ENSAMEG00000007048BCL2L2-PABPN110081.152Ailuropoda_melanoleuca
ENSTNIG00000005369pabpn19395.074ENSACIG00000021744pabpn19490.964Amphilophus_citrinellus
ENSTNIG00000005369pabpn19097.423ENSAOCG00000015805pabpn19293.023Amphiprion_ocellaris
ENSTNIG00000005369pabpn19097.423ENSAPEG00000009623pabpn19293.023Amphiprion_percula
ENSTNIG00000005369pabpn19097.938ENSATEG00000020531pabpn19293.488Anabas_testudineus
ENSTNIG00000005369pabpn17887.791ENSACAG00000006185-6782.199Anolis_carolinensis
ENSTNIG00000005369pabpn19280.100ENSANAG00000024513-7579.524Aotus_nancymaae
ENSTNIG00000005369pabpn19394.608ENSACLG00000016374pabpn17194.608Astatotilapia_calliptera
ENSTNIG00000005369pabpn19396.040ENSAMXG00000000452pabpn19489.820Astyanax_mexicanus
ENSTNIG00000005369pabpn19280.100ENSBTAG00000006884PABPN16781.910Bos_taurus
ENSTNIG00000005369pabpn18879.793ENSBTAG00000053753-7179.793Bos_taurus
ENSTNIG00000005369pabpn18085.632ENSBTAG00000050594-7483.871Bos_taurus
ENSTNIG00000005369pabpn16758.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSTNIG00000005369pabpn19379.710ENSCJAG00000007960-7779.524Callithrix_jacchus
ENSTNIG00000005369pabpn17776.923ENSCJAG00000004407-8476.923Callithrix_jacchus
ENSTNIG00000005369pabpn19379.710ENSCAFG00000011482PABPN16879.524Canis_familiaris
ENSTNIG00000005369pabpn19379.710ENSCAFG00020007298-6879.524Canis_lupus_dingo
ENSTNIG00000005369pabpn19379.710ENSCAFG00020006651-6879.524Canis_lupus_dingo
ENSTNIG00000005369pabpn19379.710ENSCHIG00000012184PABPN16879.524Capra_hircus
ENSTNIG00000005369pabpn18781.152ENSTSYG00000033996BCL2L2-PABPN19478.698Carlito_syrichta
ENSTNIG00000005369pabpn16581.560ENSCAPG00000009461-10081.560Cavia_aperea
ENSTNIG00000005369pabpn19280.296ENSCPOG00000025574PABPN16780.097Cavia_porcellus
ENSTNIG00000005369pabpn19379.710ENSCCAG00000033954BCL2L2-PABPN17779.524Cebus_capucinus
ENSTNIG00000005369pabpn19379.710ENSCATG00000038536BCL2L2-PABPN17779.524Cercocebus_atys
ENSTNIG00000005369pabpn18859.910ENSCLAG00000012423PABPN15677.632Chinchilla_lanigera
ENSTNIG00000005369pabpn19378.261ENSCSAG00000016036PABPN16878.095Chlorocebus_sabaeus
ENSTNIG00000005369pabpn19370.388ENSCHOG00000004798BCL2L2-PABPN18174.346Choloepus_hoffmanni
ENSTNIG00000005369pabpn17781.065ENSCPBG00000026060-9481.065Chrysemys_picta_bellii
ENSTNIG00000005369pabpn18658.738ENSCING00000012468-8064.362Ciona_intestinalis
ENSTNIG00000005369pabpn17160.694ENSCSAVG00000002001-8068.148Ciona_savignyi
ENSTNIG00000005369pabpn18781.152ENSCANG00000009750BCL2L2-PABPN19478.698Colobus_angolensis_palliatus
ENSTNIG00000005369pabpn19268.342ENSCANG00000030980-7566.827Colobus_angolensis_palliatus
ENSTNIG00000005369pabpn19379.227ENSCGRG00001019696Pabpn19478.107Cricetulus_griseus_chok1gshd
ENSTNIG00000005369pabpn16792.517ENSCGRG00000011102Pabpn19192.517Cricetulus_griseus_crigri
ENSTNIG00000005369pabpn19495.545ENSCSEG00000008774pabpn18895.545Cynoglossus_semilaevis
ENSTNIG00000005369pabpn19193.401ENSCVAG00000003152pabpn19290.323Cyprinodon_variegatus
ENSTNIG00000005369pabpn19395.025ENSDARG00000045373pabpn19195.025Danio_rerio
ENSTNIG00000005369pabpn17956.213ENSDARG00000087996pabpn1l8659.184Danio_rerio
ENSTNIG00000005369pabpn19379.710ENSDNOG00000023682PABPN16879.524Dasypus_novemcinctus
ENSTNIG00000005369pabpn16184.211ENSDORG00000023928-8583.607Dipodomys_ordii
ENSTNIG00000005369pabpn19379.227ENSDORG00000028966-6879.048Dipodomys_ordii
ENSTNIG00000005369pabpn18564.894FBgn0005648Pabp28364.894Drosophila_melanogaster
ENSTNIG00000005369pabpn19173.585ENSEBUG00000002322pabpn19273.585Eptatretus_burgeri
ENSTNIG00000005369pabpn19280.788ENSEASG00005011716PABPN16780.583Equus_asinus_asinus
ENSTNIG00000005369pabpn19380.000ENSECAG00000011652PABPN16584.456Equus_caballus
ENSTNIG00000005369pabpn18979.703ENSEEUG00000012973-7079.512Erinaceus_europaeus
ENSTNIG00000005369pabpn19095.385ENSELUG00000022654pabpn19191.204Esox_lucius
ENSTNIG00000005369pabpn19379.710ENSFCAG00000031922PABPN16879.524Felis_catus
ENSTNIG00000005369pabpn17778.107ENSFDAG00000018381BCL2L2-PABPN19478.107Fukomys_damarensis
ENSTNIG00000005369pabpn19094.330ENSFHEG00000007215pabpn19289.767Fundulus_heteroclitus
ENSTNIG00000005369pabpn19391.542ENSGMOG00000003922pabpn17195.522Gadus_morhua
ENSTNIG00000005369pabpn18084.831ENSGALG00000052930-6180.189Gallus_gallus
ENSTNIG00000005369pabpn19094.388ENSGAFG00000017099pabpn19291.705Gambusia_affinis
ENSTNIG00000005369pabpn19396.517ENSGACG00000002167pabpn19386.522Gasterosteus_aculeatus
ENSTNIG00000005369pabpn19379.710ENSGGOG00000022683-7779.524Gorilla_gorilla
ENSTNIG00000005369pabpn19766.667ENSGGOG00000039675-7966.667Gorilla_gorilla
ENSTNIG00000005369pabpn18870.792ENSGGOG00000025919-9765.359Gorilla_gorilla
ENSTNIG00000005369pabpn19096.907ENSHBUG00000019523pabpn19292.558Haplochromis_burtoni
ENSTNIG00000005369pabpn17065.359ENSHGLG00000009842-8765.359Heterocephalus_glaber_female
ENSTNIG00000005369pabpn18575.532ENSHGLG00000018588-7075.532Heterocephalus_glaber_female
ENSTNIG00000005369pabpn19379.227ENSHGLG00000002927-9292.517Heterocephalus_glaber_female
ENSTNIG00000005369pabpn18575.532ENSHGLG00100015565-7175.532Heterocephalus_glaber_male
ENSTNIG00000005369pabpn15982.946ENSHGLG00100018935-8875.316Heterocephalus_glaber_male
ENSTNIG00000005369pabpn18283.889ENSHGLG00100006673-9292.517Heterocephalus_glaber_male
ENSTNIG00000005369pabpn19893.365ENSHCOG00000004655pabpn19193.365Hippocampus_comes
ENSTNIG00000005369pabpn19095.876ENSIPUG00000008085PABPN19291.628Ictalurus_punctatus
ENSTNIG00000005369pabpn19087.629ENSIPUG00000000180-9284.186Ictalurus_punctatus
ENSTNIG00000005369pabpn17778.698ENSSTOG00000029847BCL2L2-PABPN19478.698Ictidomys_tridecemlineatus
ENSTNIG00000005369pabpn17778.698ENSJJAG00000023507Gm205219478.698Jaculus_jaculus
ENSTNIG00000005369pabpn110089.767ENSKMAG00000018748pabpn19291.667Kryptolebias_marmoratus
ENSTNIG00000005369pabpn19398.010ENSLBEG00000027266pabpn19293.488Labrus_bergylta
ENSTNIG00000005369pabpn18288.889ENSLACG00000000646pabpn18685.204Latimeria_chalumnae
ENSTNIG00000005369pabpn19393.532ENSLOCG00000000796pabpn17393.532Lepisosteus_oculatus
ENSTNIG00000005369pabpn18767.539ENSLOCG00000004694pabpn1l9963.721Lepisosteus_oculatus
ENSTNIG00000005369pabpn17078.289ENSLAFG00000031227-9978.289Loxodonta_africana
ENSTNIG00000005369pabpn16769.444ENSMFAG00000031355-9969.930Macaca_fascicularis
ENSTNIG00000005369pabpn18781.152ENSMFAG00000032183BCL2L2-PABPN19478.698Macaca_fascicularis
ENSTNIG00000005369pabpn19365.049ENSMMUG00000048382-6965.403Macaca_mulatta
ENSTNIG00000005369pabpn19874.766ENSMMUG00000014747BCL2L2-PABPN110077.703Macaca_mulatta
ENSTNIG00000005369pabpn19379.710ENSMNEG00000045065BCL2L2-PABPN17779.524Macaca_nemestrina
ENSTNIG00000005369pabpn18665.426ENSMNEG00000035750-9969.930Macaca_nemestrina
ENSTNIG00000005369pabpn18781.152ENSMLEG00000043862BCL2L2-PABPN19478.698Mandrillus_leucophaeus
ENSTNIG00000005369pabpn17862.500ENSMLEG00000034623-9967.832Mandrillus_leucophaeus
ENSTNIG00000005369pabpn19398.010ENSMAMG00000007979pabpn17198.010Mastacembelus_armatus
ENSTNIG00000005369pabpn19397.015ENSMZEG00005011904pabpn17197.015Maylandia_zebra
ENSTNIG00000005369pabpn19379.227ENSMAUG00000007383Gm205217079.048Mesocricetus_auratus
ENSTNIG00000005369pabpn19379.710ENSMICG00000010002BCL2L2-PABPN17779.524Microcebus_murinus
ENSTNIG00000005369pabpn19378.744ENSMOCG00000018557Gm205219092.517Microtus_ochrogaster
ENSTNIG00000005369pabpn19397.512ENSMMOG00000005405pabpn19293.023Mola_mola
ENSTNIG00000005369pabpn19278.218ENSMODG00000004535-6780.097Monodelphis_domestica
ENSTNIG00000005369pabpn19398.010ENSMALG00000019612pabpn17198.010Monopterus_albus
ENSTNIG00000005369pabpn19378.261MGP_CAROLIEiJ_G0019277Pabpn19091.837Mus_caroli
ENSTNIG00000005369pabpn18779.581MGP_CAROLIEiJ_G0019276Gm205215779.581Mus_caroli
ENSTNIG00000005369pabpn19378.744ENSMUSG00000022194Pabpn19091.837Mus_musculus
ENSTNIG00000005369pabpn18780.105ENSMUSG00000092232Gm205215780.105Mus_musculus
ENSTNIG00000005369pabpn19378.744MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSTNIG00000005369pabpn18780.105MGP_PahariEiJ_G0030294Gm205215780.105Mus_pahari
ENSTNIG00000005369pabpn19378.744MGP_SPRETEiJ_G0020166Pabpn19091.837Mus_spretus
ENSTNIG00000005369pabpn18780.105MGP_SPRETEiJ_G0020165Gm205215780.105Mus_spretus
ENSTNIG00000005369pabpn17282.278ENSMPUG00000006775-9382.278Mustela_putorius_furo
ENSTNIG00000005369pabpn19178.392ENSMLUG00000028677-7676.190Myotis_lucifugus
ENSTNIG00000005369pabpn18481.283ENSMLUG00000012452-6976.777Myotis_lucifugus
ENSTNIG00000005369pabpn18780.105ENSMLUG00000003800-10080.105Myotis_lucifugus
ENSTNIG00000005369pabpn18781.152ENSNGAG00000019529Gm205215781.152Nannospalax_galili
ENSTNIG00000005369pabpn19397.015ENSNBRG00000023955pabpn19490.964Neolamprologus_brichardi
ENSTNIG00000005369pabpn19366.505ENSNLEG00000030598-8463.839Nomascus_leucogenys
ENSTNIG00000005369pabpn16363.235ENSNLEG00000035292-9563.235Nomascus_leucogenys
ENSTNIG00000005369pabpn19379.710ENSNLEG00000015007-7479.524Nomascus_leucogenys
ENSTNIG00000005369pabpn19371.569ENSODEG00000003739-7071.498Octodon_degus
ENSTNIG00000005369pabpn19379.227ENSODEG00000002083BCL2L2-PABPN16879.048Octodon_degus
ENSTNIG00000005369pabpn17475.460ENSODEG00000011555-8174.342Octodon_degus
ENSTNIG00000005369pabpn19397.015ENSONIG00000008112pabpn17197.015Oreochromis_niloticus
ENSTNIG00000005369pabpn16879.730ENSOANG00000009218-10079.730Ornithorhynchus_anatinus
ENSTNIG00000005369pabpn19379.227ENSOCUG00000016174PABPN17679.048Oryctolagus_cuniculus
ENSTNIG00000005369pabpn19497.525ENSORLG00000027900pabpn18697.525Oryzias_latipes
ENSTNIG00000005369pabpn19097.423ENSORLG00020004681pabpn17294.313Oryzias_latipes_hni
ENSTNIG00000005369pabpn19097.423ENSORLG00015000018pabpn19293.023Oryzias_latipes_hsok
ENSTNIG00000005369pabpn19498.020ENSOMEG00000016618pabpn17598.020Oryzias_melastigma
ENSTNIG00000005369pabpn19379.710ENSOGAG00000008710PABPN16879.524Otolemur_garnettii
ENSTNIG00000005369pabpn18781.152ENSOARG00000019336BCL2L2-PABPN15281.152Ovis_aries
ENSTNIG00000005369pabpn18781.152ENSPPAG00000028984BCL2L2-PABPN19382.278Pan_paniscus
ENSTNIG00000005369pabpn17764.072ENSPPAG00000039421-9364.072Pan_paniscus
ENSTNIG00000005369pabpn19379.710ENSPPRG00000010567PABPN16879.524Panthera_pardus
ENSTNIG00000005369pabpn17778.698ENSPTIG00000001063BCL2L2-PABPN19478.698Panthera_tigris_altaica
ENSTNIG00000005369pabpn19964.019ENSPTRG00000047273-8064.019Pan_troglodytes
ENSTNIG00000005369pabpn19379.710ENSPTRG00000006167BCL2L27779.524Pan_troglodytes
ENSTNIG00000005369pabpn19379.710ENSPANG00000021100BCL2L2-PABPN17779.524Papio_anubis
ENSTNIG00000005369pabpn19166.332ENSPANG00000023326-9970.629Papio_anubis
ENSTNIG00000005369pabpn17669.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSTNIG00000005369pabpn110086.111ENSPKIG00000018052pabpn19289.815Paramormyrops_kingsleyae
ENSTNIG00000005369pabpn19394.527ENSPKIG00000008144-7194.527Paramormyrops_kingsleyae
ENSTNIG00000005369pabpn16277.612ENSPSIG00000011959-9577.612Pelodiscus_sinensis
ENSTNIG00000005369pabpn19397.015ENSPMGG00000022027pabpn17497.015Periophthalmus_magnuspinnatus
ENSTNIG00000005369pabpn19379.227ENSPEMG00000008332Gm205218992.517Peromyscus_maniculatus_bairdii
ENSTNIG00000005369pabpn17779.290ENSPMAG00000006212pabpn19468.696Petromyzon_marinus
ENSTNIG00000005369pabpn19377.184ENSPCIG00000027751-6879.048Phascolarctos_cinereus
ENSTNIG00000005369pabpn19093.878ENSPFOG00000010351pabpn19291.244Poecilia_formosa
ENSTNIG00000005369pabpn19395.567ENSPLAG00000022696pabpn17195.567Poecilia_latipinna
ENSTNIG00000005369pabpn19093.878ENSPMEG00000020856pabpn19291.244Poecilia_mexicana
ENSTNIG00000005369pabpn19396.059ENSPREG00000011278pabpn19291.705Poecilia_reticulata
ENSTNIG00000005369pabpn18882.653ENSPPYG00000005663PABPN17082.412Pongo_abelii
ENSTNIG00000005369pabpn18569.792ENSPCAG00000005902PABPN16669.744Procavia_capensis
ENSTNIG00000005369pabpn19379.710ENSPCOG00000028047BCL2L2-PABPN17779.524Propithecus_coquereli
ENSTNIG00000005369pabpn19578.095ENSPVAG00000005270PABPN16878.095Pteropus_vampyrus
ENSTNIG00000005369pabpn19096.907ENSPNYG00000013182pabpn19292.558Pundamilia_nyererei
ENSTNIG00000005369pabpn17368.987ENSPNAG00000021666pabpn1l9565.128Pygocentrus_nattereri
ENSTNIG00000005369pabpn19396.517ENSPNAG00000023526pabpn19292.093Pygocentrus_nattereri
ENSTNIG00000005369pabpn19379.227ENSRNOG00000042195Pabpn16979.048Rattus_norvegicus
ENSTNIG00000005369pabpn18284.444ENSRBIG00000040762BCL2L2-PABPN15584.444Rhinopithecus_bieti
ENSTNIG00000005369pabpn19867.593ENSRBIG00000039547-7967.593Rhinopithecus_bieti
ENSTNIG00000005369pabpn18474.866ENSRBIG00000042811-7974.866Rhinopithecus_bieti
ENSTNIG00000005369pabpn18284.444ENSRROG00000045535BCL2L2-PABPN19478.698Rhinopithecus_roxellana
ENSTNIG00000005369pabpn19867.593ENSRROG00000040409-7967.593Rhinopithecus_roxellana
ENSTNIG00000005369pabpn18967.488ENSRROG00000036409-6267.488Rhinopithecus_roxellana
ENSTNIG00000005369pabpn18775.980ENSSBOG00000026930BCL2L2-PABPN19382.278Saimiri_boliviensis_boliviensis
ENSTNIG00000005369pabpn19262.927ENSSHAG00000007707-8662.927Sarcophilus_harrisii
ENSTNIG00000005369pabpn18778.421ENSSHAG00000014841-8780.628Sarcophilus_harrisii
ENSTNIG00000005369pabpn19294.444ENSSFOG00015012565pabpn19590.094Scleropages_formosus
ENSTNIG00000005369pabpn16673.944ENSSFOG00015015833pabpn1l7868.047Scleropages_formosus
ENSTNIG00000005369pabpn19094.845ENSSFOG00015014718pabpn19290.698Scleropages_formosus
ENSTNIG00000005369pabpn19398.010ENSSMAG00000020157pabpn19293.488Scophthalmus_maximus
ENSTNIG00000005369pabpn19398.010ENSSDUG00000020582pabpn17198.010Seriola_dumerili
ENSTNIG00000005369pabpn19097.938ENSSLDG00000007118pabpn19293.488Seriola_lalandi_dorsalis
ENSTNIG00000005369pabpn16787.671ENSSPUG00000018308-9481.065Sphenodon_punctatus
ENSTNIG00000005369pabpn19396.040ENSSPAG00000021658pabpn19291.667Stegastes_partitus
ENSTNIG00000005369pabpn18667.196ENSSSCG00000034805-7562.434Sus_scrofa
ENSTNIG00000005369pabpn19280.788ENSSSCG00000002023PABPN16780.583Sus_scrofa
ENSTNIG00000005369pabpn19399.005ENSTRUG00000023664pabpn19294.419Takifugu_rubripes
ENSTNIG00000005369pabpn19379.710ENSUAMG00000024460PABPN16879.524Ursus_americanus
ENSTNIG00000005369pabpn18682.353ENSUMAG00000014288BCL2L2-PABPN15682.353Ursus_maritimus
ENSTNIG00000005369pabpn18781.152ENSVVUG00000019912BCL2L2-PABPN17481.152Vulpes_vulpes
ENSTNIG00000005369pabpn19184.264ENSXETG00000014597pabpn17381.106Xenopus_tropicalis
ENSTNIG00000005369pabpn17082.353ENSXCOG00000005158pabpn19089.610Xiphophorus_couchianus
ENSTNIG00000005369pabpn19094.898ENSXMAG00000006196pabpn19292.166Xiphophorus_maculatus

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