EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000005451 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 5671 bases
Position: chr18:9080362-9086032
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008141	zf-CCHC_2	PF13696.6	2.6e-07	1	1
ENSTNIP00000008141	zf-CCHC	PF00098.23	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000008306	-	717	-	ENSTNIP00000008141	239 (aa)	-	H3CIR3
ENSTNIT00000008307	-	432	-	ENSTNIP00000008142	144 (aa)	-	H3CIR4

Gene Model

Click here to download ENSTNIG00000005451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000005451	-	84	59.204	ENSTNIG00000011614	-	93	59.204

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005451	-	85	66.829	ENSAPOG00000015723	-	98	66.829	Acanthochromis_polyacanthus
ENSTNIG00000005451	-	76	85.635	ENSACIG00000015080	-	79	85.635	Amphilophus_citrinellus
ENSTNIG00000005451	-	86	65.217	ENSAOCG00000023269	-	94	65.217	Amphiprion_ocellaris
ENSTNIG00000005451	-	88	63.134	ENSATEG00000003539	-	97	63.134	Anabas_testudineus
ENSTNIG00000005451	-	90	59.459	ENSACLG00000010235	-	99	59.459	Astatotilapia_calliptera
ENSTNIG00000005451	-	85	52.857	ENSCSAVG00000002639	-	90	55.238	Ciona_savignyi
ENSTNIG00000005451	-	82	67.157	ENSCSEG00000015861	-	87	67.157	Cynoglossus_semilaevis
ENSTNIG00000005451	-	54	45.736	ENSDARG00000112365	zgc:174353	53	44.898	Danio_rerio
ENSTNIG00000005451	-	51	46.341	ENSDARG00000094196	si:dkey-27d5.10	51	45.390	Danio_rerio
ENSTNIG00000005451	-	54	44.961	ENSDARG00000088552	si:dkey-23f9.13	54	44.295	Danio_rerio
ENSTNIG00000005451	-	54	45.736	ENSDARG00000094335	si:dkey-23f9.12	54	44.966	Danio_rerio
ENSTNIG00000005451	-	54	45.736	ENSDARG00000111826	zgc:174354	54	44.966	Danio_rerio
ENSTNIG00000005451	-	54	45.736	ENSDARG00000113994	zgc:174354	53	44.898	Danio_rerio
ENSTNIG00000005451	-	51	46.341	ENSDARG00000113889	zgc:174355	51	45.390	Danio_rerio
ENSTNIG00000005451	-	54	45.736	ENSDARG00000070812	si:ch211-156l18.6	53	44.898	Danio_rerio
ENSTNIG00000005451	-	54	45.736	ENSDARG00000115079	zgc:174353	54	44.966	Danio_rerio
ENSTNIG00000005451	-	54	44.961	ENSDARG00000110591	si:dkey-27d5.6	54	44.295	Danio_rerio
ENSTNIG00000005451	-	54	45.736	ENSDARG00000100754	CR450764.1	54	44.966	Danio_rerio
ENSTNIG00000005451	-	60	44.966	ENSDARG00000116389	CR450764.8	61	42.604	Danio_rerio
ENSTNIG00000005451	-	79	78.836	ENSELUG00000017972	-	91	78.836	Esox_lucius
ENSTNIG00000005451	-	84	65.517	ENSFHEG00000004408	-	88	65.517	Fundulus_heteroclitus
ENSTNIG00000005451	-	90	87.037	ENSGMOG00000006417	-	99	87.037	Gadus_morhua
ENSTNIG00000005451	-	91	58.222	ENSGMOG00000004819	-	92	58.222	Gadus_morhua
ENSTNIG00000005451	-	96	86.463	ENSGACG00000016781	-	96	86.463	Gasterosteus_aculeatus
ENSTNIG00000005451	-	83	62.000	ENSHCOG00000015620	-	95	62.000	Hippocampus_comes
ENSTNIG00000005451	-	97	72.532	ENSLBEG00000004625	-	82	72.532	Labrus_bergylta
ENSTNIG00000005451	-	84	86.500	ENSMAMG00000009045	-	87	86.500	Mastacembelus_armatus
ENSTNIG00000005451	-	84	63.366	ENSMAMG00000004136	-	98	63.366	Mastacembelus_armatus
ENSTNIG00000005451	-	90	59.459	ENSMZEG00005007792	-	99	59.459	Maylandia_zebra
ENSTNIG00000005451	-	97	75.966	ENSMMOG00000003895	-	94	75.966	Mola_mola
ENSTNIG00000005451	-	90	58.824	ENSMMOG00000012378	-	92	58.824	Mola_mola
ENSTNIG00000005451	-	87	64.593	ENSMALG00000018253	-	83	64.593	Monopterus_albus
ENSTNIG00000005451	-	95	60.435	ENSONIG00000015704	-	97	60.435	Oreochromis_niloticus
ENSTNIG00000005451	-	83	63.500	ENSORLG00015021920	-	94	63.500	Oryzias_latipes_hsok
ENSTNIG00000005451	-	85	63.235	ENSOMEG00000020721	-	80	63.235	Oryzias_melastigma
ENSTNIG00000005451	-	91	84.932	ENSPMGG00000002101	-	94	84.932	Periophthalmus_magnuspinnatus
ENSTNIG00000005451	-	92	65.158	ENSPMAG00000009464	-	93	65.158	Petromyzon_marinus
ENSTNIG00000005451	-	92	84.305	ENSPFOG00000022154	-	54	84.259	Poecilia_formosa
ENSTNIG00000005451	-	90	59.459	ENSPNYG00000018879	-	99	59.459	Pundamilia_nyererei
ENSTNIG00000005451	-	91	87.671	ENSPNYG00000014384	-	90	87.671	Pundamilia_nyererei
ENSTNIG00000005451	-	85	66.341	ENSSMAG00000008324	-	88	66.341	Scophthalmus_maximus
ENSTNIG00000005451	-	84	66.832	ENSSDUG00000015232	-	98	66.832	Seriola_dumerili
ENSTNIG00000005451	-	84	66.832	ENSSLDG00000016974	-	98	66.832	Seriola_lalandi_dorsalis
ENSTNIG00000005451	-	91	88.073	ENSSLDG00000023195	-	91	88.073	Seriola_lalandi_dorsalis
ENSTNIG00000005451	-	86	59.903	ENSTRUG00000010008	-	87	59.903	Takifugu_rubripes