EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000005573 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3558 bases
Position: chr21_random:78717-82274
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008272	RRM_1	PF00076.22	3.4e-32	1	2
ENSTNIP00000008272	RRM_1	PF00076.22	3.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000008438	-	1435	-	ENSTNIP00000008272	380 (aa)	-	H3CJ43

Gene Model

Click here to download ENSTNIG00000005573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000005573	srsf4	100	80.052	ENSTNIG00000000115	-	82	89.441

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005573	srsf4	60	71.901	ENSG00000116350	SRSF4	71	81.250	Homo_sapiens
ENSTNIG00000005573	srsf4	53	84.951	ENSAMXG00000034811	srsf4	94	81.250	Astyanax_mexicanus
ENSTNIG00000005573	srsf4	59	43.874	WBGene00004698	rsp-1	97	52.414	Caenorhabditis_elegans
ENSTNIG00000005573	srsf4	66	92.754	ENSCSEG00000010058	srsf4	75	92.562	Cynoglossus_semilaevis
ENSTNIG00000005573	srsf4	83	65.528	ENSDARG00000105293	srsf4	74	91.026	Danio_rerio
ENSTNIG00000005573	srsf4	70	76.289	ENSELUG00000017551	srsf4	95	75.000	Esox_lucius
ENSTNIG00000005573	srsf4	89	73.529	ENSFHEG00000007472	srsf4	87	98.765	Fundulus_heteroclitus
ENSTNIG00000005573	srsf4	61	65.873	ENSGAFG00000018496	srsf4	66	83.696	Gambusia_affinis
ENSTNIG00000005573	srsf4	72	96.970	ENSHCOG00000012540	srsf4	69	91.935	Hippocampus_comes
ENSTNIG00000005573	srsf4	76	92.754	ENSMAMG00000004888	srsf4	70	96.667	Mastacembelus_armatus
ENSTNIG00000005573	srsf4	88	79.940	ENSMMOG00000013653	srsf4	66	89.888	Mola_mola
ENSTNIG00000005573	srsf4	84	95.480	ENSMALG00000013392	srsf4	66	95.455	Monopterus_albus
ENSTNIG00000005573	srsf4	73	92.754	ENSORLG00015007566	srsf4	71	95.000	Oryzias_latipes_hsok
ENSTNIG00000005573	srsf4	92	70.904	ENSOMEG00000005541	srsf4	51	95.000	Oryzias_melastigma
ENSTNIG00000005573	srsf4	79	97.015	ENSPLAG00000008812	srsf4	65	83.152	Poecilia_latipinna
ENSTNIG00000005573	srsf4	78	97.015	ENSPMEG00000023638	srsf4	53	92.935	Poecilia_mexicana
ENSTNIG00000005573	srsf4	71	77.391	ENSSDUG00000007387	srsf4	54	96.067	Seriola_dumerili
ENSTNIG00000005573	srsf4	90	74.269	ENSSPAG00000014538	srsf4	83	96.639	Stegastes_partitus
ENSTNIG00000005573	srsf4	89	79.883	ENSTRUG00000011891	srsf4	77	91.237	Takifugu_rubripes