EuRBPDB

Description

Ensembl ID: ENSTNIG00000005582 (Gene tree)
Gene ID: -
Gene Symbol: utp23
Alias: fc04b12|wu:fc04b12|zgc:110214
Full Name: UTP23%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 450 bases
Position: chrUn_random:79338307-79338756
Accession: ZDB-GENE-050417-353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008282	Fcf1	PF04900.12	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000008448	-	363	-	ENSTNIP00000008282	121 (aa)	-	H3CJ53

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005582	utp23	100	67.769	ENSG00000147679	UTP23	96	65.152	Homo_sapiens
ENSTNIG00000005582	utp23	100	46.341	WBGene00016411	C34E10.10	53	46.341	Caenorhabditis_elegans
ENSTNIG00000005582	utp23	88	30.841	WBGene00009266	F30A10.9	53	30.841	Caenorhabditis_elegans
ENSTNIG00000005582	utp23	100	56.198	ENSCLAG00000000531	-	51	56.198	Chinchilla_lanigera
ENSTNIG00000005582	utp23	100	57.025	ENSCING00000012577	-	55	57.025	Ciona_intestinalis
ENSTNIG00000005582	utp23	100	58.678	ENSCSAVG00000003273	-	55	58.678	Ciona_savignyi
ENSTNIG00000005582	utp23	100	62.810	ENSEBUG00000009876	utp23	53	62.810	Eptatretus_burgeri
ENSTNIG00000005582	utp23	100	89.256	ENSGMOG00000015495	utp23	51	89.256	Gadus_morhua
ENSTNIG00000005582	utp23	100	56.198	ENSHGLG00100012817	-	53	56.198	Heterocephalus_glaber_male
ENSTNIG00000005582	utp23	100	67.769	ENSMEUG00000001566	UTP23	52	67.769	Notamacropus_eugenii
ENSTNIG00000005582	utp23	100	86.777	ENSPKIG00000018790	utp23	51	86.777	Paramormyrops_kingsleyae
ENSTNIG00000005582	utp23	91	80.000	ENSPNAG00000024538	utp23	50	80.992	Pygocentrus_nattereri
ENSTNIG00000005582	utp23	100	85.950	ENSSFOG00015009226	utp23	53	85.950	Scleropages_formosus
ENSTNIG00000005582	utp23	100	88.430	ENSSDUG00000020272	utp23	50	88.430	Seriola_dumerili
ENSTNIG00000005582	utp23	100	88.430	ENSSLDG00000000393	utp23	50	88.430	Seriola_lalandi_dorsalis
ENSTNIG00000005582	utp23	100	65.289	ENSTGUG00000015403	-	52	65.289	Taeniopygia_guttata