EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000005673 (Gene tree)
Gene ID: -
Gene Symbol: helq
Alias: hel308|si:ch211-85e10.2
Full Name: helicase%2C POLQ like
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4498 bases
Position: chr4:3023383-3027880
Accession: ZDB-GENE-060503-421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002378	ResIII	PF04851.15	8.8e-10	1	1
ENSTNIP00000008380	ResIII	PF04851.15	1.1e-09	1	1
ENSTNIP00000002378	DEAD	PF00270.29	8.4e-17	1	1
ENSTNIP00000008380	DEAD	PF00270.29	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003453	-	2226	-	ENSTNIP00000002378	742 (aa)	-	H3C2B0
ENSTNIT00000008547	-	2511	-	ENSTNIP00000008380	837 (aa)	-	H3CJF1

Gene Model

Click here to download ENSTNIG00000005673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000005673	helq	83	34.862	ENSTNIG00000017816	-	98	34.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005673	helq	99	61.950	ENSG00000163312	HELQ	76	61.950	Homo_sapiens
ENSTNIG00000005673	helq	99	62.156	ENSAMEG00000004921	HELQ	83	61.950	Ailuropoda_melanoleuca
ENSTNIG00000005673	helq	96	77.391	ENSACIG00000020216	helq	85	77.143	Amphilophus_citrinellus
ENSTNIG00000005673	helq	97	74.969	ENSAOCG00000014323	helq	84	74.969	Amphiprion_ocellaris
ENSTNIG00000005673	helq	97	70.247	ENSAPEG00000023153	-	87	70.247	Amphiprion_percula
ENSTNIG00000005673	helq	99	75.689	ENSAPEG00000022964	helq	88	75.689	Amphiprion_percula
ENSTNIG00000005673	helq	99	82.661	ENSATEG00000023420	helq	82	82.635	Anabas_testudineus
ENSTNIG00000005673	helq	99	64.384	ENSAPLG00000012292	HELQ	84	64.149	Anas_platyrhynchos
ENSTNIG00000005673	helq	99	65.753	ENSACAG00000010842	HELQ	80	62.036	Anolis_carolinensis
ENSTNIG00000005673	helq	99	62.188	ENSANAG00000033513	HELQ	76	62.188	Aotus_nancymaae
ENSTNIG00000005673	helq	98	78.166	ENSACLG00000010558	helq	99	78.166	Astatotilapia_calliptera
ENSTNIG00000005673	helq	99	72.422	ENSAMXG00000012252	helq	86	71.823	Astyanax_mexicanus
ENSTNIG00000005673	helq	99	62.188	ENSBTAG00000018151	HELQ	79	62.188	Bos_taurus
ENSTNIG00000005673	helq	92	37.121	WBGene00021905	helq-1	84	37.136	Caenorhabditis_elegans
ENSTNIG00000005673	helq	99	62.069	ENSCJAG00000005247	HELQ	76	62.069	Callithrix_jacchus
ENSTNIG00000005673	helq	99	61.621	ENSCAFG00000009108	HELQ	78	61.621	Canis_familiaris
ENSTNIG00000005673	helq	99	61.621	ENSCAFG00020010495	HELQ	84	61.621	Canis_lupus_dingo
ENSTNIG00000005673	helq	99	62.861	ENSCHIG00000020128	HELQ	76	62.861	Capra_hircus
ENSTNIG00000005673	helq	97	56.143	ENSTSYG00000012900	HELQ	75	55.897	Carlito_syrichta
ENSTNIG00000005673	helq	99	62.919	ENSCPOG00000009180	HELQ	79	62.919	Cavia_porcellus
ENSTNIG00000005673	helq	99	62.426	ENSCCAG00000036773	HELQ	76	62.426	Cebus_capucinus
ENSTNIG00000005673	helq	99	62.069	ENSCATG00000034442	HELQ	76	62.069	Cercocebus_atys
ENSTNIG00000005673	helq	99	62.663	ENSCLAG00000004733	HELQ	80	62.663	Chinchilla_lanigera
ENSTNIG00000005673	helq	99	62.069	ENSCSAG00000004405	HELQ	76	62.069	Chlorocebus_sabaeus
ENSTNIG00000005673	helq	99	64.946	ENSCPBG00000007787	HELQ	78	64.946	Chrysemys_picta_bellii
ENSTNIG00000005673	helq	91	52.308	ENSCING00000006332	-	96	50.581	Ciona_intestinalis
ENSTNIG00000005673	helq	99	64.179	ENSCANG00000002407	HELQ	76	62.874	Colobus_angolensis_palliatus
ENSTNIG00000005673	helq	99	61.859	ENSCGRG00001024451	Helq	81	61.859	Cricetulus_griseus_chok1gshd
ENSTNIG00000005673	helq	99	61.859	ENSCGRG00000000309	Helq	83	61.859	Cricetulus_griseus_crigri
ENSTNIG00000005673	helq	98	76.712	ENSCVAG00000020159	helq	87	73.950	Cyprinodon_variegatus
ENSTNIG00000005673	helq	98	71.602	ENSDARG00000079818	helq	99	70.494	Danio_rerio
ENSTNIG00000005673	helq	91	41.895	FBgn0002899	mus301	76	41.895	Drosophila_melanogaster
ENSTNIG00000005673	helq	92	63.636	ENSETEG00000012220	HELQ	63	63.636	Echinops_telfairi
ENSTNIG00000005673	helq	99	63.020	ENSEASG00005013248	HELQ	78	62.485	Equus_asinus_asinus
ENSTNIG00000005673	helq	99	62.016	ENSECAG00000020717	HELQ	79	62.016	Equus_caballus
ENSTNIG00000005673	helq	99	70.144	ENSELUG00000002083	helq	84	70.144	Esox_lucius
ENSTNIG00000005673	helq	99	62.782	ENSFCAG00000009921	HELQ	79	62.782	Felis_catus
ENSTNIG00000005673	helq	99	63.059	ENSFALG00000005255	HELQ	88	63.059	Ficedula_albicollis
ENSTNIG00000005673	helq	99	61.593	ENSFDAG00000018169	HELQ	85	61.593	Fukomys_damarensis
ENSTNIG00000005673	helq	99	79.112	ENSFHEG00000015542	helq	82	79.112	Fundulus_heteroclitus
ENSTNIG00000005673	helq	98	74.394	ENSGMOG00000000020	helq	98	73.812	Gadus_morhua
ENSTNIG00000005673	helq	99	63.942	ENSGALG00000011208	HELQ	79	63.942	Gallus_gallus
ENSTNIG00000005673	helq	99	78.571	ENSGAFG00000008037	helq	80	78.571	Gambusia_affinis
ENSTNIG00000005673	helq	99	77.845	ENSGACG00000001186	helq	100	78.968	Gasterosteus_aculeatus
ENSTNIG00000005673	helq	98	64.458	ENSGAGG00000015134	HELQ	77	64.458	Gopherus_agassizii
ENSTNIG00000005673	helq	99	62.230	ENSGGOG00000008598	HELQ	76	62.069	Gorilla_gorilla
ENSTNIG00000005673	helq	99	79.104	ENSHBUG00000001997	helq	87	77.672	Haplochromis_burtoni
ENSTNIG00000005673	helq	99	62.024	ENSHGLG00000019137	HELQ	79	62.024	Heterocephalus_glaber_female
ENSTNIG00000005673	helq	99	62.024	ENSHGLG00100015489	HELQ	79	62.024	Heterocephalus_glaber_male
ENSTNIG00000005673	helq	99	73.501	ENSIPUG00000003800	helq	83	73.501	Ictalurus_punctatus
ENSTNIG00000005673	helq	98	80.822	ENSKMAG00000016486	helq	82	79.323	Kryptolebias_marmoratus
ENSTNIG00000005673	helq	99	79.452	ENSLBEG00000021886	helq	84	76.588	Labrus_bergylta
ENSTNIG00000005673	helq	99	66.308	ENSLACG00000010835	HELQ	80	66.308	Latimeria_chalumnae
ENSTNIG00000005673	helq	99	70.933	ENSLOCG00000012099	helq	83	70.933	Lepisosteus_oculatus
ENSTNIG00000005673	helq	99	61.950	ENSLAFG00000001056	HELQ	80	61.950	Loxodonta_africana
ENSTNIG00000005673	helq	99	62.069	ENSMFAG00000040731	HELQ	76	62.069	Macaca_fascicularis
ENSTNIG00000005673	helq	99	62.069	ENSMMUG00000015350	HELQ	76	62.069	Macaca_mulatta
ENSTNIG00000005673	helq	99	62.069	ENSMNEG00000038829	HELQ	76	62.069	Macaca_nemestrina
ENSTNIG00000005673	helq	99	58.740	ENSMLEG00000035125	HELQ	75	58.740	Mandrillus_leucophaeus
ENSTNIG00000005673	helq	99	80.941	ENSMAMG00000012364	helq	81	80.941	Mastacembelus_armatus
ENSTNIG00000005673	helq	99	79.104	ENSMZEG00005023270	helq	84	78.828	Maylandia_zebra
ENSTNIG00000005673	helq	99	63.420	ENSMGAG00000008112	HELQ	84	63.420	Meleagris_gallopavo
ENSTNIG00000005673	helq	90	65.747	ENSMAUG00000000249	Helq	82	65.747	Mesocricetus_auratus
ENSTNIG00000005673	helq	100	61.329	ENSMOCG00000014354	Helq	78	61.329	Microtus_ochrogaster
ENSTNIG00000005673	helq	99	83.562	ENSMMOG00000011313	helq	87	83.154	Mola_mola
ENSTNIG00000005673	helq	99	66.197	ENSMODG00000020774	HELQ	77	63.070	Monodelphis_domestica
ENSTNIG00000005673	helq	100	61.091	MGP_CAROLIEiJ_G0027457	Helq	79	61.091	Mus_caroli
ENSTNIG00000005673	helq	100	61.210	ENSMUSG00000035266	Helq	79	61.210	Mus_musculus
ENSTNIG00000005673	helq	99	61.118	MGP_PahariEiJ_G0017235	Helq	78	61.118	Mus_pahari
ENSTNIG00000005673	helq	99	61.429	MGP_SPRETEiJ_G0028454	Helq	78	61.429	Mus_spretus
ENSTNIG00000005673	helq	99	62.455	ENSMPUG00000014683	HELQ	86	62.455	Mustela_putorius_furo
ENSTNIG00000005673	helq	99	61.644	ENSMLUG00000017053	HELQ	79	61.511	Myotis_lucifugus
ENSTNIG00000005673	helq	99	62.110	ENSNLEG00000009088	HELQ	76	61.950	Nomascus_leucogenys
ENSTNIG00000005673	helq	99	78.935	ENSONIG00000012532	helq	99	78.935	Oreochromis_niloticus
ENSTNIG00000005673	helq	85	61.196	ENSOANG00000002113	-	99	61.196	Ornithorhynchus_anatinus
ENSTNIG00000005673	helq	99	63.014	ENSOCUG00000013294	HELQ	80	61.950	Oryctolagus_cuniculus
ENSTNIG00000005673	helq	97	72.273	ENSORLG00000022717	helq	84	71.792	Oryzias_latipes
ENSTNIG00000005673	helq	97	72.273	ENSORLG00015006855	helq	85	71.792	Oryzias_latipes_hsok
ENSTNIG00000005673	helq	99	71.669	ENSOMEG00000004983	helq	85	71.669	Oryzias_melastigma
ENSTNIG00000005673	helq	99	61.644	ENSOGAG00000014188	HELQ	68	61.644	Otolemur_garnettii
ENSTNIG00000005673	helq	99	62.861	ENSOARG00000002630	HELQ	78	62.861	Ovis_aries
ENSTNIG00000005673	helq	99	62.069	ENSPPAG00000004520	HELQ	76	62.069	Pan_paniscus
ENSTNIG00000005673	helq	99	62.782	ENSPPRG00000010520	HELQ	77	62.782	Panthera_pardus
ENSTNIG00000005673	helq	99	62.545	ENSPTIG00000021394	HELQ	77	62.545	Panthera_tigris_altaica
ENSTNIG00000005673	helq	99	62.069	ENSPTRG00000016232	HELQ	76	62.069	Pan_troglodytes
ENSTNIG00000005673	helq	99	61.950	ENSPANG00000005130	HELQ	76	61.950	Papio_anubis
ENSTNIG00000005673	helq	99	66.514	ENSPKIG00000021702	helq	83	66.514	Paramormyrops_kingsleyae
ENSTNIG00000005673	helq	98	63.899	ENSPSIG00000015865	HELQ	82	63.899	Pelodiscus_sinensis
ENSTNIG00000005673	helq	99	75.875	ENSPMGG00000002986	helq	85	75.875	Periophthalmus_magnuspinnatus
ENSTNIG00000005673	helq	99	61.644	ENSPEMG00000007325	Helq	79	61.429	Peromyscus_maniculatus_bairdii
ENSTNIG00000005673	helq	96	61.708	ENSPMAG00000004427	helq	99	60.520	Petromyzon_marinus
ENSTNIG00000005673	helq	99	65.753	ENSPCIG00000019746	HELQ	82	63.020	Phascolarctos_cinereus
ENSTNIG00000005673	helq	95	78.971	ENSPFOG00000002091	helq	80	77.861	Poecilia_formosa
ENSTNIG00000005673	helq	99	78.087	ENSPLAG00000015199	helq	81	78.087	Poecilia_latipinna
ENSTNIG00000005673	helq	99	77.845	ENSPMEG00000014496	helq	79	77.845	Poecilia_mexicana
ENSTNIG00000005673	helq	98	78.820	ENSPREG00000012605	helq	81	77.724	Poecilia_reticulata
ENSTNIG00000005673	helq	99	61.831	ENSPPYG00000014897	HELQ	76	61.831	Pongo_abelii
ENSTNIG00000005673	helq	99	62.319	ENSPCAG00000004842	HELQ	70	62.319	Procavia_capensis
ENSTNIG00000005673	helq	99	61.644	ENSPVAG00000006438	HELQ	75	55.383	Pteropus_vampyrus
ENSTNIG00000005673	helq	90	79.104	ENSPNYG00000010575	helq	80	78.308	Pundamilia_nyererei
ENSTNIG00000005673	helq	99	72.135	ENSPNAG00000009397	helq	87	72.135	Pygocentrus_nattereri
ENSTNIG00000005673	helq	99	61.474	ENSRNOG00000002181	Helq	78	61.474	Rattus_norvegicus
ENSTNIG00000005673	helq	99	64.179	ENSRBIG00000041497	HELQ	76	63.234	Rhinopithecus_bieti
ENSTNIG00000005673	helq	99	64.179	ENSRROG00000045128	HELQ	76	63.114	Rhinopithecus_roxellana
ENSTNIG00000005673	helq	99	62.307	ENSSBOG00000034314	HELQ	79	62.307	Saimiri_boliviensis_boliviensis
ENSTNIG00000005673	helq	99	67.123	ENSSHAG00000006446	HELQ	80	62.456	Sarcophilus_harrisii
ENSTNIG00000005673	helq	99	72.464	ENSSFOG00015019460	helq	95	68.483	Scleropages_formosus
ENSTNIG00000005673	helq	99	81.198	ENSSDUG00000015665	helq	81	81.198	Seriola_dumerili
ENSTNIG00000005673	helq	99	61.483	ENSSARG00000013932	HELQ	91	61.687	Sorex_araneus
ENSTNIG00000005673	helq	97	72.508	ENSSPAG00000008705	helq	83	72.073	Stegastes_partitus
ENSTNIG00000005673	helq	99	62.134	ENSSSCG00000009236	HELQ	77	65.583	Sus_scrofa
ENSTNIG00000005673	helq	99	64.106	ENSTGUG00000002154	HELQ	83	64.106	Taeniopygia_guttata
ENSTNIG00000005673	helq	100	89.041	ENSTRUG00000018644	helq	82	87.828	Takifugu_rubripes
ENSTNIG00000005673	helq	99	62.545	ENSTTRG00000004895	HELQ	76	62.545	Tursiops_truncatus
ENSTNIG00000005673	helq	99	62.036	ENSUAMG00000012816	HELQ	76	61.712	Ursus_americanus
ENSTNIG00000005673	helq	99	62.156	ENSUMAG00000008823	HELQ	79	61.831	Ursus_maritimus
ENSTNIG00000005673	helq	99	61.644	ENSVPAG00000011357	HELQ	75	61.118	Vicugna_pacos
ENSTNIG00000005673	helq	99	61.263	ENSVVUG00000015676	HELQ	78	61.263	Vulpes_vulpes
ENSTNIG00000005673	helq	98	62.130	ENSXETG00000001831	helq	99	60.529	Xenopus_tropicalis
ENSTNIG00000005673	helq	98	76.276	ENSXCOG00000016210	helq	99	76.663	Xiphophorus_couchianus
ENSTNIG00000005673	helq	98	76.577	ENSXMAG00000012563	helq	99	76.904	Xiphophorus_maculatus