EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000005674 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1293 bases
Position: chr4:3020819-3022111
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008381	Ribosomal_S18	PF01084.20	6.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000008548	-	635	-	ENSTNIP00000008381	130 (aa)	-	H3CJF2

Gene Model

Click here to download ENSTNIG00000005674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005674's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005674	mrps18c	100	69.231	ENSAPOG00000019045	mrps18c	100	69.231	Acanthochromis_polyacanthus
ENSTNIG00000005674	mrps18c	69	82.222	ENSACIG00000020253	mrps18c	89	82.222	Amphilophus_citrinellus
ENSTNIG00000005674	mrps18c	100	66.923	ENSAOCG00000014338	mrps18c	100	66.923	Amphiprion_ocellaris
ENSTNIG00000005674	mrps18c	67	83.908	ENSAPEG00000023068	-	88	79.570	Amphiprion_percula
ENSTNIG00000005674	mrps18c	100	66.923	ENSAPEG00000022956	mrps18c	100	66.923	Amphiprion_percula
ENSTNIG00000005674	mrps18c	98	75.591	ENSATEG00000023417	mrps18c	98	75.591	Anabas_testudineus
ENSTNIG00000005674	mrps18c	68	64.773	ENSAPLG00000012544	-	85	64.773	Anas_platyrhynchos
ENSTNIG00000005674	mrps18c	71	84.783	ENSACLG00000010521	mrps18c	90	84.783	Astatotilapia_calliptera
ENSTNIG00000005674	mrps18c	69	75.556	ENSAMXG00000012238	mrps18c	91	75.556	Astyanax_mexicanus
ENSTNIG00000005674	mrps18c	82	56.604	ENSCPBG00000007783	-	65	56.604	Chrysemys_picta_bellii
ENSTNIG00000005674	mrps18c	78	71.569	ENSCSEG00000000711	mrps18c	93	55.446	Cynoglossus_semilaevis
ENSTNIG00000005674	mrps18c	100	60.769	ENSCVAG00000020169	mrps18c	100	60.769	Cyprinodon_variegatus
ENSTNIG00000005674	mrps18c	82	68.868	ENSDARG00000069624	mrps18c	78	68.868	Danio_rerio
ENSTNIG00000005674	mrps18c	100	57.895	ENSELUG00000024603	mrps18c	100	57.895	Esox_lucius
ENSTNIG00000005674	mrps18c	100	66.923	ENSFHEG00000015550	mrps18c	95	66.923	Fundulus_heteroclitus
ENSTNIG00000005674	mrps18c	100	66.923	ENSFHEG00000018752	-	100	66.923	Fundulus_heteroclitus
ENSTNIG00000005674	mrps18c	74	59.375	ENSGALG00000023191	MRPS18C	67	59.375	Gallus_gallus
ENSTNIG00000005674	mrps18c	100	62.308	ENSGAFG00000008048	mrps18c	83	62.308	Gambusia_affinis
ENSTNIG00000005674	mrps18c	95	52.381	ENSGAGG00000015144	-	89	52.381	Gopherus_agassizii
ENSTNIG00000005674	mrps18c	100	72.308	ENSHBUG00000002008	mrps18c	100	72.308	Haplochromis_burtoni
ENSTNIG00000005674	mrps18c	96	64.000	ENSHCOG00000013161	mrps18c	91	64.000	Hippocampus_comes
ENSTNIG00000005674	mrps18c	70	72.527	ENSIPUG00000003783	mrps18c	88	72.527	Ictalurus_punctatus
ENSTNIG00000005674	mrps18c	100	70.000	ENSKMAG00000016467	mrps18c	100	70.000	Kryptolebias_marmoratus
ENSTNIG00000005674	mrps18c	99	77.519	ENSLBEG00000021861	mrps18c	99	77.519	Labrus_bergylta
ENSTNIG00000005674	mrps18c	99	77.519	ENSLBEG00000019174	mrps18c	99	77.519	Labrus_bergylta
ENSTNIG00000005674	mrps18c	98	51.969	ENSLACG00000011243	mrps18c	99	51.969	Latimeria_chalumnae
ENSTNIG00000005674	mrps18c	93	60.976	ENSLOCG00000012115	mrps18c	90	60.976	Lepisosteus_oculatus
ENSTNIG00000005674	mrps18c	100	64.925	ENSMAMG00000012386	mrps18c	100	64.925	Mastacembelus_armatus
ENSTNIG00000005674	mrps18c	100	72.308	ENSMZEG00005023278	mrps18c	100	72.308	Maylandia_zebra
ENSTNIG00000005674	mrps18c	71	85.870	ENSMMOG00000011316	mrps18c	70	85.870	Mola_mola
ENSTNIG00000005674	mrps18c	100	72.308	ENSNBRG00000006182	mrps18c	100	72.308	Neolamprologus_brichardi
ENSTNIG00000005674	mrps18c	68	69.318	ENSMEUG00000010972	-	69	69.318	Notamacropus_eugenii
ENSTNIG00000005674	mrps18c	100	70.000	ENSONIG00000012527	mrps18c	92	81.720	Oreochromis_niloticus
ENSTNIG00000005674	mrps18c	99	66.667	ENSORLG00015006869	mrps18c	99	66.667	Oryzias_latipes_hsok
ENSTNIG00000005674	mrps18c	68	77.273	ENSOMEG00000005009	mrps18c	85	77.273	Oryzias_melastigma
ENSTNIG00000005674	mrps18c	78	67.647	ENSPKIG00000021736	mrps18c	74	67.647	Paramormyrops_kingsleyae
ENSTNIG00000005674	mrps18c	70	85.714	ENSPMGG00000002991	mrps18c	92	85.714	Periophthalmus_magnuspinnatus
ENSTNIG00000005674	mrps18c	100	63.077	ENSPFOG00000002351	mrps18c	83	63.077	Poecilia_formosa
ENSTNIG00000005674	mrps18c	100	63.077	ENSPLAG00000015187	mrps18c	100	63.077	Poecilia_latipinna
ENSTNIG00000005674	mrps18c	100	63.846	ENSPMEG00000014488	mrps18c	83	63.846	Poecilia_mexicana
ENSTNIG00000005674	mrps18c	64	73.494	ENSPREG00000012593	mrps18c	85	73.494	Poecilia_reticulata
ENSTNIG00000005674	mrps18c	100	71.538	ENSPNYG00000010654	mrps18c	100	71.538	Pundamilia_nyererei
ENSTNIG00000005674	mrps18c	75	69.072	ENSPNAG00000009350	mrps18c	91	69.072	Pygocentrus_nattereri
ENSTNIG00000005674	mrps18c	94	63.934	ENSSFOG00015019444	mrps18c	88	63.934	Scleropages_formosus
ENSTNIG00000005674	mrps18c	100	76.154	ENSSDUG00000015676	mrps18c	100	76.154	Seriola_dumerili
ENSTNIG00000005674	mrps18c	86	71.311	ENSSLDG00000002034	mrps18c	93	71.311	Seriola_lalandi_dorsalis
ENSTNIG00000005674	mrps18c	82	57.009	ENSSPUG00000013990	-	78	57.009	Sphenodon_punctatus
ENSTNIG00000005674	mrps18c	99	63.566	ENSSPAG00000008687	mrps18c	99	63.566	Stegastes_partitus
ENSTNIG00000005674	mrps18c	100	89.231	ENSTRUG00000024403	mrps18c	100	89.231	Takifugu_rubripes
ENSTNIG00000005674	mrps18c	96	54.135	ENSXETG00000027597	mrps18c	99	54.135	Xenopus_tropicalis
ENSTNIG00000005674	mrps18c	100	58.462	ENSXCOG00000016208	mrps18c	89	73.034	Xiphophorus_couchianus
ENSTNIG00000005674	mrps18c	100	63.846	ENSXMAG00000012555	mrps18c	83	63.846	Xiphophorus_maculatus