EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000005856 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 948 bases
Position: chr12:12374562-12375509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	1	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	2	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	3	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	4	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	5	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	6	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	7	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	8	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	9	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	10	11
ENSTNIP00000008579	zf-C2H2	PF00096.26	5e-59	11	11
ENSTNIP00000008579	zf-met	PF12874.7	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000008747	-	948	-	ENSTNIP00000008579	316 (aa)	-	H3CK00

Gene Model

Click here to download ENSTNIG00000005856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000005856	-	98	50.000	ENSTNIG00000003479	-	100	50.000
ENSTNIG00000005856	-	99	37.209	ENSTNIG00000011367	znf710b	51	37.209
ENSTNIG00000005856	-	99	44.795	ENSTNIG00000001164	ZNF628	99	44.795
ENSTNIG00000005856	-	99	49.196	ENSTNIG00000003979	-	99	49.196
ENSTNIG00000005856	-	100	41.818	ENSTNIG00000011188	-	97	41.818
ENSTNIG00000005856	-	64	45.614	ENSTNIG00000017808	-	56	45.614
ENSTNIG00000005856	-	99	43.111	ENSTNIG00000009831	-	96	43.111
ENSTNIG00000005856	-	99	45.395	ENSTNIG00000008200	-	100	45.395
ENSTNIG00000005856	-	99	33.455	ENSTNIG00000014443	prdm9	65	33.455
ENSTNIG00000005856	-	99	53.543	ENSTNIG00000000330	-	100	53.543
ENSTNIG00000005856	-	100	38.793	ENSTNIG00000000073	znf646	99	38.793
ENSTNIG00000005856	-	99	46.739	ENSTNIG00000000277	-	93	46.739
ENSTNIG00000005856	-	99	32.044	ENSTNIG00000011746	hinfp	59	31.771
ENSTNIG00000005856	-	99	42.715	ENSTNIG00000010902	zbtb17	57	42.715
ENSTNIG00000005856	-	99	50.926	ENSTNIG00000003834	gfi1b	52	50.926
ENSTNIG00000005856	-	99	35.754	ENSTNIG00000007805	zbtb41	51	35.754
ENSTNIG00000005856	-	98	43.529	ENSTNIG00000017000	-	100	43.529
ENSTNIG00000005856	-	99	43.426	ENSTNIG00000002344	-	99	43.426
ENSTNIG00000005856	-	99	42.718	ENSTNIG00000002343	-	88	42.718
ENSTNIG00000005856	-	100	37.743	ENSTNIG00000008100	-	100	37.898
ENSTNIG00000005856	-	99	37.380	ENSTNIG00000000528	-	96	37.380
ENSTNIG00000005856	-	98	42.697	ENSTNIG00000018384	scrt1b	51	42.697
ENSTNIG00000005856	-	100	39.297	ENSTNIG00000012449	zbtb48	50	39.297
ENSTNIG00000005856	-	99	52.632	ENSTNIG00000005023	-	100	43.478
ENSTNIG00000005856	-	96	44.444	ENSTNIG00000013008	-	56	44.444
ENSTNIG00000005856	-	99	38.095	ENSTNIG00000005798	zbtb16a	53	38.095
ENSTNIG00000005856	-	100	38.372	ENSTNIG00000008154	-	100	35.417
ENSTNIG00000005856	-	98	48.430	ENSTNIG00000000320	-	100	48.430
ENSTNIG00000005856	-	99	36.232	ENSTNIG00000003880	znf319b	93	36.015
ENSTNIG00000005856	-	99	47.321	ENSTNIG00000008242	-	99	47.321
ENSTNIG00000005856	-	99	36.334	ENSTNIG00000001159	si:dkey-89b17.4	99	36.334
ENSTNIG00000005856	-	99	42.918	ENSTNIG00000010722	GZF1	54	42.918
ENSTNIG00000005856	-	98	38.261	ENSTNIG00000005901	prdm5	73	38.261
ENSTNIG00000005856	-	99	50.515	ENSTNIG00000000934	-	100	50.242
ENSTNIG00000005856	-	98	41.429	ENSTNIG00000018001	e4f1	59	39.752
ENSTNIG00000005856	-	99	35.938	ENSTNIG00000002892	znf652	52	35.938
ENSTNIG00000005856	-	99	46.939	ENSTNIG00000005479	-	99	46.939
ENSTNIG00000005856	-	99	38.732	ENSTNIG00000001921	-	65	38.732
ENSTNIG00000005856	-	98	32.804	ENSTNIG00000016665	znf131	51	31.019
ENSTNIG00000005856	-	98	42.105	ENSTNIG00000008504	snai2	66	42.105
ENSTNIG00000005856	-	98	39.130	ENSTNIG00000003865	-	87	39.130
ENSTNIG00000005856	-	99	46.903	ENSTNIG00000018984	-	99	46.903
ENSTNIG00000005856	-	100	38.889	ENSTNIG00000019069	-	100	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005856	-	99	52.041	ENSAPOG00000005767	-	100	52.041	Acanthochromis_polyacanthus
ENSTNIG00000005856	-	99	52.683	ENSAOCG00000000570	-	65	52.683	Amphiprion_ocellaris
ENSTNIG00000005856	-	99	48.696	ENSAPEG00000018796	-	75	49.345	Amphiprion_percula
ENSTNIG00000005856	-	100	42.254	ENSCVAG00000018507	-	71	42.254	Cyprinodon_variegatus
ENSTNIG00000005856	-	100	41.667	ENSFHEG00000022534	-	79	41.667	Fundulus_heteroclitus
ENSTNIG00000005856	-	99	48.627	ENSKMAG00000013745	-	66	48.627	Kryptolebias_marmoratus
ENSTNIG00000005856	-	99	58.333	ENSMAMG00000018114	-	88	52.991	Mastacembelus_armatus
ENSTNIG00000005856	-	99	40.513	ENSMAMG00000009817	-	70	43.750	Mastacembelus_armatus
ENSTNIG00000005856	-	100	57.080	ENSMZEG00005016808	-	89	57.080	Maylandia_zebra
ENSTNIG00000005856	-	99	55.016	ENSMALG00000001085	-	90	55.016	Monopterus_albus
ENSTNIG00000005856	-	99	55.491	ENSMALG00000012116	-	99	55.491	Monopterus_albus
ENSTNIG00000005856	-	99	53.226	ENSMALG00000008930	-	84	51.852	Monopterus_albus
ENSTNIG00000005856	-	98	54.248	ENSMALG00000004579	-	98	54.248	Monopterus_albus
ENSTNIG00000005856	-	99	60.656	ENSMALG00000012757	-	67	60.656	Monopterus_albus
ENSTNIG00000005856	-	99	48.058	ENSNBRG00000013501	-	81	48.058	Neolamprologus_brichardi
ENSTNIG00000005856	-	99	45.370	ENSOMEG00000021420	-	61	45.370	Oryzias_melastigma
ENSTNIG00000005856	-	99	35.484	ENSPREG00000014898	-	67	35.484	Poecilia_reticulata
ENSTNIG00000005856	-	98	50.273	ENSPNYG00000007756	-	76	46.847	Pundamilia_nyererei
ENSTNIG00000005856	-	99	53.927	ENSSDUG00000001263	-	95	53.927	Seriola_dumerili
ENSTNIG00000005856	-	100	41.176	ENSSLDG00000023661	-	87	41.176	Seriola_lalandi_dorsalis
ENSTNIG00000005856	-	99	50.644	ENSTRUG00000022206	-	56	50.644	Takifugu_rubripes
ENSTNIG00000005856	-	99	52.838	ENSTRUG00000022919	-	77	52.838	Takifugu_rubripes
ENSTNIG00000005856	-	98	56.552	ENSTRUG00000003111	-	82	56.552	Takifugu_rubripes
ENSTNIG00000005856	-	99	95.192	ENSTRUG00000012273	-	73	95.192	Takifugu_rubripes
ENSTNIG00000005856	-	99	54.369	ENSTRUG00000023925	-	59	54.369	Takifugu_rubripes
ENSTNIG00000005856	-	99	56.270	ENSTRUG00000001268	-	98	55.263	Takifugu_rubripes
ENSTNIG00000005856	-	99	52.679	ENSXCOG00000019492	-	97	51.485	Xiphophorus_couchianus
ENSTNIG00000005856	-	99	47.137	ENSXMAG00000022297	-	99	47.137	Xiphophorus_maculatus