EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000005901 (Gene tree)
Gene ID
-
Gene Symbol
prdm5
Alias
un-named hi61|unm hi61
Full Name
PR domain containing 5
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Minus strand
Length
20708 bases
Position
chr1:11370095-11390802
Accession
ZDB-GENE-040708-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000008627zf-C2H2PF00096.261.2e-4017
ENSTNIP00000008627zf-C2H2PF00096.261.2e-4027
ENSTNIP00000008627zf-C2H2PF00096.261.2e-4037
ENSTNIP00000008627zf-C2H2PF00096.261.2e-4047
ENSTNIP00000008627zf-C2H2PF00096.261.2e-4057
ENSTNIP00000008627zf-C2H2PF00096.261.2e-4067
ENSTNIP00000008627zf-C2H2PF00096.261.2e-4077
ENSTNIP00000008629zf-C2H2PF00096.262.8e-3917
ENSTNIP00000008629zf-C2H2PF00096.262.8e-3927
ENSTNIP00000008629zf-C2H2PF00096.262.8e-3937
ENSTNIP00000008629zf-C2H2PF00096.262.8e-3947
ENSTNIP00000008629zf-C2H2PF00096.262.8e-3957
ENSTNIP00000008629zf-C2H2PF00096.262.8e-3967
ENSTNIP00000008629zf-C2H2PF00096.262.8e-3977
ENSTNIP00000008629zf-metPF12874.73.2e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000008795-1878-ENSTNIP00000008627625 (aa)-H3CK48
ENSTNIT00000008797-1785-ENSTNIP00000008629594 (aa)-H3CK50
Gene Model
Click here to download ENSTNIG00000005901's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005901's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000005901prdm57436.364ENSTNIG00000018984-9936.364
ENSTNIG00000005901prdm57331.364ENSTNIG00000010902zbtb175931.364
ENSTNIG00000005901prdm57435.268ENSTNIG00000012449zbtb485535.268
ENSTNIG00000005901prdm57434.000ENSTNIG00000003880znf319b9331.100
ENSTNIG00000005901prdm58037.387ENSTNIG00000011188-10036.607
ENSTNIG00000005901prdm57330.000ENSTNIG00000005047si:ch211-216l23.18130.000
ENSTNIG00000005901prdm56838.788ENSTNIG00000003834gfi1b5338.788
ENSTNIG00000005901prdm57435.714ENSTNIG00000008200-10035.714
ENSTNIG00000005901prdm57338.426ENSTNIG00000000330-9938.426
ENSTNIG00000005901prdm56130.275ENSTNIG00000003865-5930.275
ENSTNIG00000005901prdm57731.527ENSTNIG00000001159si:dkey-89b17.49831.841
ENSTNIG00000005901prdm57433.831ENSTNIG00000009831-9633.831
ENSTNIG00000005901prdm57436.087ENSTNIG00000001164ZNF6289936.087
ENSTNIG00000005901prdm57633.498ENSTNIG00000003979-9934.300
ENSTNIG00000005901prdm57336.269ENSTNIG00000010722GZF15236.269
ENSTNIG00000005901prdm57334.831ENSTNIG00000008100-10034.831
ENSTNIG00000005901prdm57345.312ENSTNIG00000005051znf3415845.312
ENSTNIG00000005901prdm58133.624ENSTNIG00000005798zbtb16a7633.624
ENSTNIG00000005901prdm58132.759ENSTNIG00000001921-9832.759
ENSTNIG00000005901prdm57432.911ENSTNIG00000009020prdm12b6432.911
ENSTNIG00000005901prdm56833.482ENSTNIG00000008018-5133.482
ENSTNIG00000005901prdm55241.463ENSTNIG00000003479-10041.463
ENSTNIG00000005901prdm57831.646ENSTNIG00000005859-7431.646
ENSTNIG00000005901prdm57338.261ENSTNIG00000005856-9838.261
ENSTNIG00000005901prdm57432.500ENSTNIG00000019069-10032.500
ENSTNIG00000005901prdm57433.019ENSTNIG00000007805zbtb415333.019
ENSTNIG00000005901prdm57336.022ENSTNIG00000002344-10035.714
ENSTNIG00000005901prdm57635.329ENSTNIG00000008242-9935.329
ENSTNIG00000005901prdm58431.792ENSTNIG00000008194prdm148131.792
ENSTNIG00000005901prdm57434.975ENSTNIG00000005479-9935.714
ENSTNIG00000005901prdm57232.328ENSTNIG00000011367znf710b5433.152
ENSTNIG00000005901prdm57437.209ENSTNIG00000000320-10036.073
ENSTNIG00000005901prdm57235.294ENSTNIG00000000277-9635.294
ENSTNIG00000005901prdm57646.512ENSTNIG00000005023-9946.512
ENSTNIG00000005901prdm56838.710ENSTNIG00000000934-9738.710
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000005901prdm510066.057ENSG00000138738PRDM59186.139Homo_sapiens
ENSTNIG00000005901prdm510074.917ENSAPOG00000023220prdm510074.675Acanthochromis_polyacanthus
ENSTNIG00000005901prdm59158.824ENSAMEG00000003050PRDM510058.925Ailuropoda_melanoleuca
ENSTNIG00000005901prdm510073.920ENSACIG00000000406prdm510073.366Amphilophus_citrinellus
ENSTNIG00000005901prdm510076.080ENSAOCG00000014806prdm510075.817Amphiprion_ocellaris
ENSTNIG00000005901prdm510072.277ENSAPEG00000016846prdm510072.078Amphiprion_percula
ENSTNIG00000005901prdm510077.725ENSATEG00000013829prdm59977.329Anabas_testudineus
ENSTNIG00000005901prdm59568.709ENSAPLG00000013828PRDM510068.709Anas_platyrhynchos
ENSTNIG00000005901prdm510064.082ENSACAG00000012999PRDM510064.613Anolis_carolinensis
ENSTNIG00000005901prdm510070.943ENSANAG00000027411PRDM510075.497Aotus_nancymaae
ENSTNIG00000005901prdm510076.578ENSACLG00000017996prdm510076.144Astatotilapia_calliptera
ENSTNIG00000005901prdm58570.391ENSAMXG00000041864prdm59969.763Astyanax_mexicanus
ENSTNIG00000005901prdm510064.873ENSBTAG00000012111PRDM510064.873Bos_taurus
ENSTNIG00000005901prdm510070.566ENSCJAG00000003133PRDM510074.834Callithrix_jacchus
ENSTNIG00000005901prdm59157.011ENSCAFG00000004179PRDM59955.707Canis_familiaris
ENSTNIG00000005901prdm510065.724ENSCAFG00020017685PRDM510065.724Canis_lupus_dingo
ENSTNIG00000005901prdm510065.724ENSCHIG00000018772PRDM510065.724Capra_hircus
ENSTNIG00000005901prdm59563.415ENSTSYG00000009630PRDM59463.178Carlito_syrichta
ENSTNIG00000005901prdm59860.637ENSCAPG00000015217PRDM510074.834Cavia_aperea
ENSTNIG00000005901prdm59570.189ENSCPOG00000012883PRDM510074.834Cavia_porcellus
ENSTNIG00000005901prdm510070.943ENSCCAG00000023157PRDM510075.497Cebus_capucinus
ENSTNIG00000005901prdm510070.943ENSCATG00000042510PRDM510075.497Cercocebus_atys
ENSTNIG00000005901prdm59569.811ENSCLAG00000005392PRDM510074.834Chinchilla_lanigera
ENSTNIG00000005901prdm510066.223ENSCSAG00000003729PRDM510066.223Chlorocebus_sabaeus
ENSTNIG00000005901prdm59977.833ENSCHOG00000007801PRDM59177.833Choloepus_hoffmanni
ENSTNIG00000005901prdm510068.175ENSCPBG00000024735PRDM510068.643Chrysemys_picta_bellii
ENSTNIG00000005901prdm510070.943ENSCANG00000036807PRDM510075.497Colobus_angolensis_palliatus
ENSTNIG00000005901prdm510070.566ENSCGRG00001010581Prdm510074.834Cricetulus_griseus_chok1gshd
ENSTNIG00000005901prdm59563.604ENSCGRG00000010996-9963.604Cricetulus_griseus_crigri
ENSTNIG00000005901prdm510074.667ENSCSEG00000019979prdm510074.667Cynoglossus_semilaevis
ENSTNIG00000005901prdm510074.092ENSCVAG00000013692prdm510073.406Cyprinodon_variegatus
ENSTNIG00000005901prdm510071.273ENSDARG00000006288prdm510071.273Danio_rerio
ENSTNIG00000005901prdm59162.565ENSDNOG00000002009PRDM510062.565Dasypus_novemcinctus
ENSTNIG00000005901prdm510069.434ENSDORG00000007739Prdm510069.434Dipodomys_ordii
ENSTNIG00000005901prdm58375.000ENSETEG00000020268PRDM58775.000Echinops_telfairi
ENSTNIG00000005901prdm59960.362ENSEBUG00000004301prdm510060.691Eptatretus_burgeri
ENSTNIG00000005901prdm510071.321ENSEASG00005018365PRDM510076.159Equus_asinus_asinus
ENSTNIG00000005901prdm59960.405ENSECAG00000011516PRDM58960.589Equus_caballus
ENSTNIG00000005901prdm510059.774ENSECAG00000024747-10058.364Equus_caballus
ENSTNIG00000005901prdm59958.997ENSEEUG00000010306PRDM510058.997Erinaceus_europaeus
ENSTNIG00000005901prdm510064.038ENSELUG00000005894prdm510064.806Esox_lucius
ENSTNIG00000005901prdm510065.724ENSFCAG00000025656PRDM510065.724Felis_catus
ENSTNIG00000005901prdm57369.184ENSFALG00000008381PRDM59970.312Ficedula_albicollis
ENSTNIG00000005901prdm510070.189ENSFDAG00000021361PRDM510074.834Fukomys_damarensis
ENSTNIG00000005901prdm510076.578ENSFHEG00000013040prdm510075.980Fundulus_heteroclitus
ENSTNIG00000005901prdm510061.006ENSGMOG00000012038prdm510061.842Gadus_morhua
ENSTNIG00000005901prdm510069.764ENSGALG00000011963PRDM510069.764Gallus_gallus
ENSTNIG00000005901prdm59972.154ENSGAFG00000019233prdm510070.270Gambusia_affinis
ENSTNIG00000005901prdm59963.455ENSGAGG00000020362PRDM59967.304Gopherus_agassizii
ENSTNIG00000005901prdm510070.943ENSGGOG00000013562PRDM510075.497Gorilla_gorilla
ENSTNIG00000005901prdm510076.412ENSHBUG00000023375prdm510075.980Haplochromis_burtoni
ENSTNIG00000005901prdm510067.547ENSHGLG00000003010PRDM510069.536Heterocephalus_glaber_female
ENSTNIG00000005901prdm510070.566ENSHGLG00100003696PRDM510074.834Heterocephalus_glaber_male
ENSTNIG00000005901prdm510075.394ENSHCOG00000012131prdm59975.671Hippocampus_comes
ENSTNIG00000005901prdm510073.500ENSIPUG00000001248prdm510073.500Ictalurus_punctatus
ENSTNIG00000005901prdm59562.982ENSSTOG00000004741PRDM510072.848Ictidomys_tridecemlineatus
ENSTNIG00000005901prdm59570.189ENSJJAG00000011464Prdm510074.172Jaculus_jaculus
ENSTNIG00000005901prdm510075.654ENSKMAG00000013663prdm510075.654Kryptolebias_marmoratus
ENSTNIG00000005901prdm510076.777ENSLBEG00000022736prdm510075.932Labrus_bergylta
ENSTNIG00000005901prdm59166.271ENSLACG00000009187PRDM59967.188Latimeria_chalumnae
ENSTNIG00000005901prdm510072.205ENSLOCG00000009778prdm59972.205Lepisosteus_oculatus
ENSTNIG00000005901prdm510065.890ENSLAFG00000006532PRDM59874.297Loxodonta_africana
ENSTNIG00000005901prdm510070.943ENSMFAG00000045845PRDM510075.497Macaca_fascicularis
ENSTNIG00000005901prdm510070.943ENSMMUG00000003249PRDM510075.497Macaca_mulatta
ENSTNIG00000005901prdm510070.943ENSMNEG00000019018PRDM510075.497Macaca_nemestrina
ENSTNIG00000005901prdm59762.987ENSMLEG00000023145PRDM510064.912Mandrillus_leucophaeus
ENSTNIG00000005901prdm510074.408ENSMAMG00000013419prdm510073.758Mastacembelus_armatus
ENSTNIG00000005901prdm510076.412ENSMZEG00005020645prdm510075.980Maylandia_zebra
ENSTNIG00000005901prdm59568.293ENSMGAG00000010710PRDM510069.040Meleagris_gallopavo
ENSTNIG00000005901prdm510070.566ENSMAUG00000006768Prdm510074.834Mesocricetus_auratus
ENSTNIG00000005901prdm510070.566ENSMICG00000001459PRDM510074.834Microcebus_murinus
ENSTNIG00000005901prdm510070.566ENSMOCG00000016267Prdm510074.834Microtus_ochrogaster
ENSTNIG00000005901prdm510076.471ENSMMOG00000006035prdm510076.471Mola_mola
ENSTNIG00000005901prdm510066.088ENSMODG00000018942PRDM510066.088Monodelphis_domestica
ENSTNIG00000005901prdm510076.294ENSMALG00000013934prdm510076.628Monopterus_albus
ENSTNIG00000005901prdm510070.189MGP_CAROLIEiJ_G0028463Prdm510074.172Mus_caroli
ENSTNIG00000005901prdm510070.189ENSMUSG00000029913Prdm510074.172Mus_musculus
ENSTNIG00000005901prdm510070.189MGP_PahariEiJ_G0022203Prdm510074.172Mus_pahari
ENSTNIG00000005901prdm510070.189MGP_SPRETEiJ_G0029467Prdm510074.172Mus_spretus
ENSTNIG00000005901prdm510064.715ENSMPUG00000017415PRDM510064.715Mustela_putorius_furo
ENSTNIG00000005901prdm59156.282ENSMLUG00000006097PRDM510056.282Myotis_lucifugus
ENSTNIG00000005901prdm510070.189ENSNGAG00000018317Prdm510074.172Nannospalax_galili
ENSTNIG00000005901prdm510075.415ENSNBRG00000004976prdm510075.000Neolamprologus_brichardi
ENSTNIG00000005901prdm510070.943ENSNLEG00000009107PRDM510075.497Nomascus_leucogenys
ENSTNIG00000005901prdm58384.746ENSMEUG00000006576-7184.746Notamacropus_eugenii
ENSTNIG00000005901prdm58563.415ENSOPRG00000011066-7563.415Ochotona_princeps
ENSTNIG00000005901prdm59970.189ENSODEG00000009133PRDM510074.834Octodon_degus
ENSTNIG00000005901prdm510077.251ENSONIG00000003111prdm59976.983Oreochromis_niloticus
ENSTNIG00000005901prdm59967.418ENSOANG00000015109PRDM59867.418Ornithorhynchus_anatinus
ENSTNIG00000005901prdm59358.574ENSOCUG00000013454PRDM510058.744Oryctolagus_cuniculus
ENSTNIG00000005901prdm510076.578ENSORLG00000016247prdm510076.578Oryzias_latipes
ENSTNIG00000005901prdm510076.578ENSORLG00020018051prdm510076.144Oryzias_latipes_hni
ENSTNIG00000005901prdm510076.578ENSORLG00015013760prdm510076.578Oryzias_latipes_hsok
ENSTNIG00000005901prdm510076.119ENSOMEG00000005143prdm510076.119Oryzias_melastigma
ENSTNIG00000005901prdm58454.784ENSOGAG00000009996PRDM59854.562Otolemur_garnettii
ENSTNIG00000005901prdm59461.455ENSOARG00000015473PRDM510060.917Ovis_aries
ENSTNIG00000005901prdm59762.825ENSPPAG00000043045PRDM510063.158Pan_paniscus
ENSTNIG00000005901prdm510065.724ENSPPRG00000001020PRDM510065.724Panthera_pardus
ENSTNIG00000005901prdm59564.561ENSPTIG00000010807PRDM59564.561Panthera_tigris_altaica
ENSTNIG00000005901prdm510070.943ENSPTRG00000016403PRDM510075.497Pan_troglodytes
ENSTNIG00000005901prdm510070.943ENSPANG00000023612PRDM510075.497Papio_anubis
ENSTNIG00000005901prdm510051.618ENSPKIG00000015492prdm510051.310Paramormyrops_kingsleyae
ENSTNIG00000005901prdm510068.069ENSPSIG00000013505PRDM510068.331Pelodiscus_sinensis
ENSTNIG00000005901prdm510075.960ENSPMGG00000012622prdm510075.246Periophthalmus_magnuspinnatus
ENSTNIG00000005901prdm57353.865ENSPMAG00000005248prdm510054.831Petromyzon_marinus
ENSTNIG00000005901prdm58084.615ENSPFOG00000018630prdm59783.582Poecilia_formosa
ENSTNIG00000005901prdm510076.303ENSPLAG00000014148prdm510075.894Poecilia_latipinna
ENSTNIG00000005901prdm510076.578ENSPMEG00000018002prdm510076.144Poecilia_mexicana
ENSTNIG00000005901prdm510076.578ENSPREG00000018366prdm510076.144Poecilia_reticulata
ENSTNIG00000005901prdm510065.032ENSPPYG00000015031PRDM510065.032Pongo_abelii
ENSTNIG00000005901prdm59562.292ENSPCAG00000011671PRDM510062.292Procavia_capensis
ENSTNIG00000005901prdm510070.566ENSPCOG00000022828PRDM510074.834Propithecus_coquereli
ENSTNIG00000005901prdm59560.131ENSPVAG00000012309PRDM510060.131Pteropus_vampyrus
ENSTNIG00000005901prdm510076.412ENSPNYG00000012194prdm510075.980Pundamilia_nyererei
ENSTNIG00000005901prdm510074.333ENSPNAG00000026181prdm510073.856Pygocentrus_nattereri
ENSTNIG00000005901prdm59367.966ENSPNAG00000023191-9968.000Pygocentrus_nattereri
ENSTNIG00000005901prdm59962.791ENSRNOG00000023679Prdm59962.791Rattus_norvegicus
ENSTNIG00000005901prdm510070.943ENSRBIG00000041307PRDM510075.497Rhinopithecus_bieti
ENSTNIG00000005901prdm59452.214ENSRROG00000035343PRDM510056.842Rhinopithecus_roxellana
ENSTNIG00000005901prdm510070.943ENSSBOG00000022100PRDM510075.497Saimiri_boliviensis_boliviensis
ENSTNIG00000005901prdm59158.801ENSSHAG00000003250PRDM59958.994Sarcophilus_harrisii
ENSTNIG00000005901prdm510069.854ENSSFOG00015020478prdm510069.854Scleropages_formosus
ENSTNIG00000005901prdm510077.019ENSSMAG00000018844prdm59977.019Scophthalmus_maximus
ENSTNIG00000005901prdm510076.578ENSSDUG00000020397prdm510076.578Seriola_dumerili
ENSTNIG00000005901prdm510076.578ENSSLDG00000013353prdm510076.578Seriola_lalandi_dorsalis
ENSTNIG00000005901prdm57373.636ENSSARG00000014129-6873.636Sorex_araneus
ENSTNIG00000005901prdm510069.414ENSSPUG00000009941PRDM510079.470Sphenodon_punctatus
ENSTNIG00000005901prdm510077.093ENSSPAG00000013866prdm510076.827Stegastes_partitus
ENSTNIG00000005901prdm510066.057ENSSSCG00000009101PRDM510066.057Sus_scrofa
ENSTNIG00000005901prdm59568.552ENSTGUG00000001920PRDM510068.552Taeniopygia_guttata
ENSTNIG00000005901prdm510078.667ENSTRUG00000013850prdm510078.105Takifugu_rubripes
ENSTNIG00000005901prdm59550.242ENSTBEG00000015386PRDM58650.242Tupaia_belangeri
ENSTNIG00000005901prdm510064.241ENSTTRG00000010996PRDM510064.241Tursiops_truncatus
ENSTNIG00000005901prdm59553.646ENSUAMG00000009994PRDM59453.819Ursus_americanus
ENSTNIG00000005901prdm59571.321ENSUMAG00000003733PRDM59971.321Ursus_maritimus
ENSTNIG00000005901prdm59757.003ENSVPAG00000007435PRDM510057.003Vicugna_pacos
ENSTNIG00000005901prdm59362.988ENSVVUG00000013192PRDM510062.988Vulpes_vulpes
ENSTNIG00000005901prdm510064.760ENSXETG00000002101prdm510065.773Xenopus_tropicalis
ENSTNIG00000005901prdm510076.744ENSXCOG00000008567prdm510076.183Xiphophorus_couchianus
ENSTNIG00000005901prdm510076.744ENSXMAG00000013825prdm510076.183Xiphophorus_maculatus

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