EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000005916 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 8134 bases
Position: chrUn_random:82089827-82097960
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008644	tRNA-synt_1g	PF09334.11	5.9e-13	1	1
ENSTNIP00000003635	tRNA-synt_1g	PF09334.11	6.1e-13	1	1
ENSTNIP00000008644	Anticodon_1	PF08264.13	2.2e-33	1	1
ENSTNIP00000003635	Anticodon_1	PF08264.13	2.2e-33	1	1
ENSTNIP00000008644	tRNA-synt_1	PF00133.22	5.9e-187	1	1
ENSTNIP00000003635	tRNA-synt_1	PF00133.22	6.1e-187	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000008812	-	3219	-	ENSTNIP00000008644	1073 (aa)	-	H3CK65
ENSTNIT00000000965	-	3237	-	ENSTNIP00000003635	1079 (aa)	-	H3C5W5

Gene Model

Click here to download ENSTNIG00000005916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000005916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000005916	vars2	92	47.353	ENSTNIG00000008011	vars	81	46.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000005916	vars2	95	70.741	ENSAPOG00000007396	vars2	96	70.509	Acanthochromis_polyacanthus
ENSTNIG00000005916	vars2	99	51.869	ENSAMEG00000012997	VARS2	96	51.399	Ailuropoda_melanoleuca
ENSTNIG00000005916	vars2	98	69.831	ENSACIG00000004344	vars2	97	70.560	Amphilophus_citrinellus
ENSTNIG00000005916	vars2	95	71.222	ENSAOCG00000000476	vars2	97	70.543	Amphiprion_ocellaris
ENSTNIG00000005916	vars2	95	70.741	ENSAPEG00000008646	vars2	94	70.067	Amphiprion_percula
ENSTNIG00000005916	vars2	95	73.450	ENSATEG00000012291	vars2	97	72.893	Anabas_testudineus
ENSTNIG00000005916	vars2	97	51.282	ENSACAG00000022093	VARS2	91	53.059	Anolis_carolinensis
ENSTNIG00000005916	vars2	99	50.792	ENSANAG00000038018	VARS2	99	50.421	Aotus_nancymaae
ENSTNIG00000005916	vars2	97	71.226	ENSACLG00000018673	vars2	97	71.950	Astatotilapia_calliptera
ENSTNIG00000005916	vars2	96	66.763	ENSAMXG00000017773	vars2	96	67.947	Astyanax_mexicanus
ENSTNIG00000005916	vars2	99	51.955	ENSBTAG00000010698	VARS2	99	51.586	Bos_taurus
ENSTNIG00000005916	vars2	99	50.698	ENSCJAG00000019826	VARS2	99	50.560	Callithrix_jacchus
ENSTNIG00000005916	vars2	96	52.647	ENSCAFG00000000454	VARS2	95	52.632	Canis_familiaris
ENSTNIG00000005916	vars2	83	57.127	ENSCAFG00020019387	VARS2	90	57.432	Canis_lupus_dingo
ENSTNIG00000005916	vars2	99	51.859	ENSCHIG00000007847	VARS2	99	51.493	Capra_hircus
ENSTNIG00000005916	vars2	99	51.535	ENSTSYG00000009904	VARS2	95	52.330	Carlito_syrichta
ENSTNIG00000005916	vars2	87	53.838	ENSCAPG00000017770	VARS2	98	53.412	Cavia_aperea
ENSTNIG00000005916	vars2	97	52.095	ENSCPOG00000021834	VARS2	96	51.541	Cavia_porcellus
ENSTNIG00000005916	vars2	99	50.931	ENSCCAG00000037907	VARS2	99	50.561	Cebus_capucinus
ENSTNIG00000005916	vars2	100	51.011	ENSCATG00000032554	VARS2	100	50.599	Cercocebus_atys
ENSTNIG00000005916	vars2	99	51.306	ENSCLAG00000002889	VARS2	96	51.448	Chinchilla_lanigera
ENSTNIG00000005916	vars2	100	51.287	ENSCSAG00000008327	VARS2	100	50.876	Chlorocebus_sabaeus
ENSTNIG00000005916	vars2	91	56.499	ENSCPBG00000021502	VARS2	96	56.295	Chrysemys_picta_bellii
ENSTNIG00000005916	vars2	100	50.735	ENSCANG00000014991	VARS2	99	50.323	Colobus_angolensis_palliatus
ENSTNIG00000005916	vars2	96	51.992	ENSCGRG00001021535	Vars2	96	51.594	Cricetulus_griseus_chok1gshd
ENSTNIG00000005916	vars2	96	51.992	ENSCGRG00000014112	Vars2	96	51.594	Cricetulus_griseus_crigri
ENSTNIG00000005916	vars2	86	71.111	ENSCSEG00000015432	vars2	91	78.231	Cynoglossus_semilaevis
ENSTNIG00000005916	vars2	65	71.248	ENSCVAG00000017765	vars2	98	70.968	Cyprinodon_variegatus
ENSTNIG00000005916	vars2	97	66.476	ENSDARG00000056717	vars2	97	67.119	Danio_rerio
ENSTNIG00000005916	vars2	79	50.883	ENSDORG00000008516	Vars2	92	50.766	Dipodomys_ordii
ENSTNIG00000005916	vars2	99	45.455	ENSETEG00000014844	VARS2	94	46.983	Echinops_telfairi
ENSTNIG00000005916	vars2	99	51.529	ENSEASG00005019997	VARS2	95	55.437	Equus_asinus_asinus
ENSTNIG00000005916	vars2	99	52.048	ENSECAG00000018202	VARS2	99	51.495	Equus_caballus
ENSTNIG00000005916	vars2	97	68.362	ENSELUG00000017824	vars2	97	67.894	Esox_lucius
ENSTNIG00000005916	vars2	99	50.514	ENSFCAG00000010531	VARS2	99	50.514	Felis_catus
ENSTNIG00000005916	vars2	99	51.676	ENSFDAG00000017216	VARS2	96	52.073	Fukomys_damarensis
ENSTNIG00000005916	vars2	91	66.062	ENSFHEG00000013932	vars2	95	66.701	Fundulus_heteroclitus
ENSTNIG00000005916	vars2	90	69.112	ENSGMOG00000018960	vars2	99	68.492	Gadus_morhua
ENSTNIG00000005916	vars2	91	67.636	ENSGAFG00000004737	vars2	97	67.273	Gambusia_affinis
ENSTNIG00000005916	vars2	93	71.916	ENSGACG00000001464	vars2	99	71.615	Gasterosteus_aculeatus
ENSTNIG00000005916	vars2	92	55.960	ENSGAGG00000011652	VARS2	99	55.758	Gopherus_agassizii
ENSTNIG00000005916	vars2	100	50.827	ENSGGOG00000014587	VARS2	100	50.230	Gorilla_gorilla
ENSTNIG00000005916	vars2	97	68.709	ENSHBUG00000002448	vars2	97	68.906	Haplochromis_burtoni
ENSTNIG00000005916	vars2	99	51.165	ENSHGLG00000012886	VARS2	92	51.787	Heterocephalus_glaber_female
ENSTNIG00000005916	vars2	99	51.072	ENSHGLG00100016535	VARS2	96	51.691	Heterocephalus_glaber_male
ENSTNIG00000005916	vars2	67	68.681	ENSHCOG00000017907	vars2	97	68.407	Hippocampus_comes
ENSTNIG00000005916	vars2	93	67.198	ENSIPUG00000015573	Vars2	95	65.698	Ictalurus_punctatus
ENSTNIG00000005916	vars2	99	50.884	ENSSTOG00000009924	VARS2	99	50.514	Ictidomys_tridecemlineatus
ENSTNIG00000005916	vars2	97	50.759	ENSJJAG00000011144	Vars2	92	52.261	Jaculus_jaculus
ENSTNIG00000005916	vars2	96	68.738	ENSKMAG00000001393	vars2	98	67.857	Kryptolebias_marmoratus
ENSTNIG00000005916	vars2	51	79.818	ENSLBEG00000005480	-	81	79.492	Labrus_bergylta
ENSTNIG00000005916	vars2	96	69.615	ENSLBEG00000011949	vars2	98	67.385	Labrus_bergylta
ENSTNIG00000005916	vars2	95	49.616	ENSLACG00000001576	-	99	49.616	Latimeria_chalumnae
ENSTNIG00000005916	vars2	99	50.980	ENSLAFG00000015183	VARS2	96	51.351	Loxodonta_africana
ENSTNIG00000005916	vars2	100	50.735	ENSMFAG00000042367	VARS2	100	50.599	Macaca_fascicularis
ENSTNIG00000005916	vars2	100	50.643	ENSMMUG00000018609	VARS2	100	50.507	Macaca_mulatta
ENSTNIG00000005916	vars2	100	50.827	ENSMNEG00000043163	VARS2	100	50.691	Macaca_nemestrina
ENSTNIG00000005916	vars2	100	50.919	ENSMLEG00000041728	VARS2	97	50.600	Mandrillus_leucophaeus
ENSTNIG00000005916	vars2	95	69.682	ENSMAMG00000020339	vars2	98	68.550	Mastacembelus_armatus
ENSTNIG00000005916	vars2	97	71.132	ENSMZEG00005017669	vars2	97	71.854	Maylandia_zebra
ENSTNIG00000005916	vars2	99	51.529	ENSMAUG00000018946	Vars2	99	51.299	Mesocricetus_auratus
ENSTNIG00000005916	vars2	83	55.765	ENSMICG00000005365	VARS2	99	55.345	Microcebus_murinus
ENSTNIG00000005916	vars2	93	56.563	ENSMOCG00000014607	Vars2	95	47.935	Microtus_ochrogaster
ENSTNIG00000005916	vars2	93	73.108	ENSMMOG00000012122	vars2	97	72.046	Mola_mola
ENSTNIG00000005916	vars2	96	50.768	ENSMODG00000015848	VARS2	91	51.603	Monodelphis_domestica
ENSTNIG00000005916	vars2	93	70.547	ENSMALG00000009217	vars2	99	70.249	Monopterus_albus
ENSTNIG00000005916	vars2	95	52.473	MGP_CAROLIEiJ_G0021529	Vars2	93	57.326	Mus_caroli
ENSTNIG00000005916	vars2	95	52.182	ENSMUSG00000038838	Vars2	93	57.326	Mus_musculus
ENSTNIG00000005916	vars2	95	52.427	MGP_PahariEiJ_G0020523	Vars2	93	56.960	Mus_pahari
ENSTNIG00000005916	vars2	95	52.182	MGP_SPRETEiJ_G0022436	Vars2	93	57.143	Mus_spretus
ENSTNIG00000005916	vars2	97	51.973	ENSMPUG00000011643	VARS2	97	51.668	Mustela_putorius_furo
ENSTNIG00000005916	vars2	94	53.366	ENSMLUG00000002356	VARS2	91	52.838	Myotis_lucifugus
ENSTNIG00000005916	vars2	96	49.323	ENSNGAG00000020607	Vars2	95	49.033	Nannospalax_galili
ENSTNIG00000005916	vars2	61	64.384	ENSNBRG00000001624	vars2	57	64.384	Neolamprologus_brichardi
ENSTNIG00000005916	vars2	97	51.224	ENSNLEG00000005625	VARS2	97	50.283	Nomascus_leucogenys
ENSTNIG00000005916	vars2	78	56.594	ENSMEUG00000014475	VARS2	89	56.594	Notamacropus_eugenii
ENSTNIG00000005916	vars2	86	54.639	ENSOPRG00000000682	VARS2	85	53.403	Ochotona_princeps
ENSTNIG00000005916	vars2	97	51.174	ENSODEG00000017965	VARS2	94	52.259	Octodon_degus
ENSTNIG00000005916	vars2	93	53.475	ENSONIG00000004734	vars2	99	53.282	Oreochromis_niloticus
ENSTNIG00000005916	vars2	72	45.501	ENSOANG00000000398	-	92	45.174	Ornithorhynchus_anatinus
ENSTNIG00000005916	vars2	99	48.485	ENSOCUG00000021496	VARS2	59	50.394	Oryctolagus_cuniculus
ENSTNIG00000005916	vars2	94	68.683	ENSORLG00000010632	vars2	96	68.260	Oryzias_latipes
ENSTNIG00000005916	vars2	94	68.560	ENSORLG00020018584	vars2	96	67.782	Oryzias_latipes_hni
ENSTNIG00000005916	vars2	93	68.928	ENSORLG00015010408	vars2	96	68.069	Oryzias_latipes_hsok
ENSTNIG00000005916	vars2	95	69.149	ENSOMEG00000008360	vars2	96	68.900	Oryzias_melastigma
ENSTNIG00000005916	vars2	99	50.738	ENSOGAG00000006087	VARS2	93	51.588	Otolemur_garnettii
ENSTNIG00000005916	vars2	99	51.072	ENSOARG00000010844	VARS2	97	50.607	Ovis_aries
ENSTNIG00000005916	vars2	100	50.643	ENSPPAG00000041141	VARS2	100	50.138	Pan_paniscus
ENSTNIG00000005916	vars2	99	50.982	ENSPPRG00000006751	VARS2	97	50.649	Panthera_pardus
ENSTNIG00000005916	vars2	99	50.889	ENSPTIG00000017799	VARS2	96	52.864	Panthera_tigris_altaica
ENSTNIG00000005916	vars2	100	50.643	ENSPTRG00000034497	VARS2	100	50.138	Pan_troglodytes
ENSTNIG00000005916	vars2	100	50.919	ENSPANG00000018481	VARS2	100	50.507	Papio_anubis
ENSTNIG00000005916	vars2	96	66.764	ENSPKIG00000011372	vars2	97	66.186	Paramormyrops_kingsleyae
ENSTNIG00000005916	vars2	59	64.107	ENSPSIG00000006206	VARS2	92	63.988	Pelodiscus_sinensis
ENSTNIG00000005916	vars2	96	68.416	ENSPMGG00000000465	vars2	97	67.946	Periophthalmus_magnuspinnatus
ENSTNIG00000005916	vars2	97	51.561	ENSPEMG00000014691	Vars2	97	51.423	Peromyscus_maniculatus_bairdii
ENSTNIG00000005916	vars2	95	51.852	ENSPCIG00000015040	VARS2	96	51.495	Phascolarctos_cinereus
ENSTNIG00000005916	vars2	96	68.030	ENSPFOG00000017616	vars2	97	67.996	Poecilia_formosa
ENSTNIG00000005916	vars2	98	67.195	ENSPLAG00000019778	vars2	97	68.061	Poecilia_latipinna
ENSTNIG00000005916	vars2	98	67.007	ENSPMEG00000011123	vars2	97	67.871	Poecilia_mexicana
ENSTNIG00000005916	vars2	94	60.697	ENSPREG00000014998	vars2	93	62.107	Poecilia_reticulata
ENSTNIG00000005916	vars2	100	50.735	ENSPPYG00000016424	VARS2	100	50.230	Pongo_abelii
ENSTNIG00000005916	vars2	64	54.063	ENSPCAG00000006946	VARS2	65	54.063	Procavia_capensis
ENSTNIG00000005916	vars2	99	50.696	ENSPCOG00000014839	VARS2	93	51.009	Propithecus_coquereli
ENSTNIG00000005916	vars2	99	50.980	ENSPVAG00000004197	VARS2	99	50.698	Pteropus_vampyrus
ENSTNIG00000005916	vars2	87	78.877	ENSPNYG00000010314	vars2	100	78.877	Pundamilia_nyererei
ENSTNIG00000005916	vars2	96	67.084	ENSPNAG00000026793	vars2	95	66.603	Pygocentrus_nattereri
ENSTNIG00000005916	vars2	99	50.649	ENSRNOG00000000833	Vars2	99	50.372	Rattus_norvegicus
ENSTNIG00000005916	vars2	100	50.827	ENSRBIG00000032725	VARS2	100	50.507	Rhinopithecus_bieti
ENSTNIG00000005916	vars2	100	50.735	ENSRROG00000043847	VARS2	100	50.415	Rhinopithecus_roxellana
ENSTNIG00000005916	vars2	99	49.726	ENSSBOG00000033240	VARS2	96	49.452	Saimiri_boliviensis_boliviensis
ENSTNIG00000005916	vars2	96	51.794	ENSSHAG00000009307	VARS2	97	51.644	Sarcophilus_harrisii
ENSTNIG00000005916	vars2	95	65.407	ENSSFOG00015016187	vars2	99	63.374	Scleropages_formosus
ENSTNIG00000005916	vars2	89	81.377	ENSSMAG00000020842	vars2	96	81.124	Scophthalmus_maximus
ENSTNIG00000005916	vars2	95	73.745	ENSSDUG00000011598	vars2	97	73.073	Seriola_dumerili
ENSTNIG00000005916	vars2	95	72.833	ENSSLDG00000015492	vars2	96	72.789	Seriola_lalandi_dorsalis
ENSTNIG00000005916	vars2	50	61.940	ENSSARG00000003786	-	61	61.940	Sorex_araneus
ENSTNIG00000005916	vars2	79	58.491	ENSSPUG00000014700	VARS2	88	58.491	Sphenodon_punctatus
ENSTNIG00000005916	vars2	98	68.674	ENSSPAG00000004654	vars2	99	68.109	Stegastes_partitus
ENSTNIG00000005916	vars2	99	52.328	ENSSSCG00000001384	VARS2	96	55.337	Sus_scrofa
ENSTNIG00000005916	vars2	98	81.446	ENSTRUG00000005264	vars2	98	82.021	Takifugu_rubripes
ENSTNIG00000005916	vars2	83	50.148	ENSTTRG00000012243	VARS2	86	50.297	Tursiops_truncatus
ENSTNIG00000005916	vars2	99	51.634	ENSUAMG00000026124	VARS2	99	54.780	Ursus_americanus
ENSTNIG00000005916	vars2	99	52.056	ENSUMAG00000019894	VARS2	99	52.056	Ursus_maritimus
ENSTNIG00000005916	vars2	96	52.404	ENSVVUG00000010754	VARS2	90	52.437	Vulpes_vulpes
ENSTNIG00000005916	vars2	88	51.623	ENSXETG00000003036	vars2	90	54.618	Xenopus_tropicalis
ENSTNIG00000005916	vars2	95	69.306	ENSXCOG00000003455	vars2	97	69.852	Xiphophorus_couchianus
ENSTNIG00000005916	vars2	98	68.421	ENSXMAG00000013523	vars2	97	68.756	Xiphophorus_maculatus