EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000006049 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 8649 bases
Position: chr9:518815-527463
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008792	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000008962	-	3270	-	ENSTNIP00000008792	1090 (aa)	-	H3CKL3

Gene Model

Click here to download ENSTNIG00000006049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000006049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000006049	-	98	67.274	ENSTNIG00000014694	rad54l2	94	67.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000006049	-	100	66.817	ENSG00000164080	RAD54L2	75	69.427	Homo_sapiens
ENSTNIG00000006049	-	99	79.800	ENSAPOG00000024141	-	76	78.571	Acanthochromis_polyacanthus
ENSTNIG00000006049	-	99	67.521	ENSAMEG00000009326	RAD54L2	75	66.817	Ailuropoda_melanoleuca
ENSTNIG00000006049	-	98	68.000	ENSACIG00000018079	rad54l2	77	67.668	Amphilophus_citrinellus
ENSTNIG00000006049	-	98	78.903	ENSACIG00000015932	-	78	78.439	Amphilophus_citrinellus
ENSTNIG00000006049	-	99	79.800	ENSAOCG00000022380	-	77	77.475	Amphiprion_ocellaris
ENSTNIG00000006049	-	99	80.397	ENSATEG00000006641	-	74	80.036	Anabas_testudineus
ENSTNIG00000006049	-	99	68.383	ENSATEG00000009346	rad54l2	80	66.184	Anabas_testudineus
ENSTNIG00000006049	-	98	69.691	ENSAPLG00000002121	RAD54L2	80	69.437	Anas_platyrhynchos
ENSTNIG00000006049	-	98	69.273	ENSACAG00000015883	RAD54L2	84	68.308	Anolis_carolinensis
ENSTNIG00000006049	-	100	66.546	ENSANAG00000025396	RAD54L2	75	66.366	Aotus_nancymaae
ENSTNIG00000006049	-	99	79.345	ENSACLG00000018296	-	74	79.295	Astatotilapia_calliptera
ENSTNIG00000006049	-	98	68.268	ENSACLG00000019111	rad54l2	81	67.302	Astatotilapia_calliptera
ENSTNIG00000006049	-	99	67.909	ENSAMXG00000013807	rad54l2	73	70.215	Astyanax_mexicanus
ENSTNIG00000006049	-	98	67.491	ENSBTAG00000032253	RAD54L2	76	66.637	Bos_taurus
ENSTNIG00000006049	-	66	46.047	WBGene00007761	rad-26	60	46.047	Caenorhabditis_elegans
ENSTNIG00000006049	-	100	66.907	ENSCJAG00000005575	RAD54L2	79	66.727	Callithrix_jacchus
ENSTNIG00000006049	-	100	66.907	ENSCAFG00000010120	RAD54L2	75	66.727	Canis_familiaris
ENSTNIG00000006049	-	100	66.907	ENSCAFG00020022320	RAD54L2	75	66.727	Canis_lupus_dingo
ENSTNIG00000006049	-	99	67.246	ENSCHIG00000008830	RAD54L2	75	66.456	Capra_hircus
ENSTNIG00000006049	-	100	66.456	ENSTSYG00000013200	RAD54L2	75	66.276	Carlito_syrichta
ENSTNIG00000006049	-	87	61.647	ENSCAPG00000016465	RAD54L2	69	61.776	Cavia_aperea
ENSTNIG00000006049	-	100	66.997	ENSCPOG00000005941	RAD54L2	75	66.817	Cavia_porcellus
ENSTNIG00000006049	-	89	65.041	ENSCCAG00000024465	RAD54L2	74	65.041	Cebus_capucinus
ENSTNIG00000006049	-	100	66.877	ENSCATG00000039891	RAD54L2	76	66.697	Cercocebus_atys
ENSTNIG00000006049	-	100	66.907	ENSCLAG00000008059	RAD54L2	75	66.727	Chinchilla_lanigera
ENSTNIG00000006049	-	100	66.967	ENSCSAG00000014027	RAD54L2	75	66.787	Chlorocebus_sabaeus
ENSTNIG00000006049	-	98	70.417	ENSCPBG00000016624	RAD54L2	77	69.258	Chrysemys_picta_bellii
ENSTNIG00000006049	-	91	50.777	ENSCING00000009208	-	82	54.485	Ciona_intestinalis
ENSTNIG00000006049	-	99	66.787	ENSCANG00000036093	RAD54L2	76	66.606	Colobus_angolensis_palliatus
ENSTNIG00000006049	-	100	66.727	ENSCGRG00000007921	Rad54l2	75	66.637	Cricetulus_griseus_crigri
ENSTNIG00000006049	-	99	65.284	ENSCSEG00000001740	rad54l2	73	64.982	Cynoglossus_semilaevis
ENSTNIG00000006049	-	99	76.434	ENSCSEG00000006115	-	85	76.523	Cynoglossus_semilaevis
ENSTNIG00000006049	-	98	68.182	ENSCVAG00000017887	rad54l2	73	67.909	Cyprinodon_variegatus
ENSTNIG00000006049	-	99	76.812	ENSCVAG00000005376	-	76	75.505	Cyprinodon_variegatus
ENSTNIG00000006049	-	99	68.875	ENSDARG00000063031	rad54l2	77	68.445	Danio_rerio
ENSTNIG00000006049	-	100	66.126	ENSDNOG00000017359	RAD54L2	77	65.825	Dasypus_novemcinctus
ENSTNIG00000006049	-	90	69.873	ENSDORG00000000651	Rad54l2	72	69.620	Dipodomys_ordii
ENSTNIG00000006049	-	89	51.835	FBgn0034976	CG4049	59	51.835	Drosophila_melanogaster
ENSTNIG00000006049	-	98	65.628	ENSETEG00000013290	RAD54L2	80	65.811	Echinops_telfairi
ENSTNIG00000006049	-	95	55.748	ENSEBUG00000001591	rad54l2	78	55.616	Eptatretus_burgeri
ENSTNIG00000006049	-	100	66.727	ENSEASG00005012868	RAD54L2	75	66.546	Equus_asinus_asinus
ENSTNIG00000006049	-	100	66.817	ENSECAG00000014759	RAD54L2	75	66.637	Equus_caballus
ENSTNIG00000006049	-	83	67.442	ENSEEUG00000001759	RAD54L2	67	67.248	Erinaceus_europaeus
ENSTNIG00000006049	-	100	73.699	ENSELUG00000011246	RAD54L2	77	73.218	Esox_lucius
ENSTNIG00000006049	-	100	66.907	ENSFCAG00000018563	RAD54L2	75	66.727	Felis_catus
ENSTNIG00000006049	-	100	69.355	ENSFALG00000008938	RAD54L2	84	69.624	Ficedula_albicollis
ENSTNIG00000006049	-	100	66.997	ENSFDAG00000017084	RAD54L2	75	66.817	Fukomys_damarensis
ENSTNIG00000006049	-	98	78.297	ENSFHEG00000017845	-	74	78.102	Fundulus_heteroclitus
ENSTNIG00000006049	-	98	67.493	ENSFHEG00000023241	rad54l2	73	68.481	Fundulus_heteroclitus
ENSTNIG00000006049	-	99	68.211	ENSGMOG00000010674	rad54l2	82	68.704	Gadus_morhua
ENSTNIG00000006049	-	98	69.609	ENSGALG00000003243	RAD54L2	75	69.355	Gallus_gallus
ENSTNIG00000006049	-	98	68.178	ENSGAFG00000021535	rad54l2	77	67.867	Gambusia_affinis
ENSTNIG00000006049	-	99	75.719	ENSGAFG00000002396	-	76	75.899	Gambusia_affinis
ENSTNIG00000006049	-	98	79.852	ENSGACG00000005642	-	86	79.053	Gasterosteus_aculeatus
ENSTNIG00000006049	-	99	66.517	ENSGACG00000001558	rad54l2	80	66.128	Gasterosteus_aculeatus
ENSTNIG00000006049	-	98	70.502	ENSGAGG00000020971	RAD54L2	82	69.293	Gopherus_agassizii
ENSTNIG00000006049	-	100	66.817	ENSGGOG00000010032	RAD54L2	76	66.637	Gorilla_gorilla
ENSTNIG00000006049	-	98	68.359	ENSHBUG00000012480	rad54l2	81	67.634	Haplochromis_burtoni
ENSTNIG00000006049	-	99	79.709	ENSHBUG00000018930	-	74	79.656	Haplochromis_burtoni
ENSTNIG00000006049	-	100	66.817	ENSHGLG00000012116	RAD54L2	75	66.637	Heterocephalus_glaber_female
ENSTNIG00000006049	-	100	66.817	ENSHGLG00100007205	RAD54L2	75	66.637	Heterocephalus_glaber_male
ENSTNIG00000006049	-	99	65.405	ENSHCOG00000007601	rad54l2	72	65.433	Hippocampus_comes
ENSTNIG00000006049	-	99	75.314	ENSHCOG00000006741	-	76	75.314	Hippocampus_comes
ENSTNIG00000006049	-	98	66.759	ENSIPUG00000019664	rad54l2	75	66.455	Ictalurus_punctatus
ENSTNIG00000006049	-	99	66.062	ENSIPUG00000024973	-	79	65.811	Ictalurus_punctatus
ENSTNIG00000006049	-	100	66.907	ENSSTOG00000010014	RAD54L2	75	66.727	Ictidomys_tridecemlineatus
ENSTNIG00000006049	-	100	66.817	ENSJJAG00000014332	Rad54l2	75	66.637	Jaculus_jaculus
ENSTNIG00000006049	-	99	67.240	ENSKMAG00000001976	rad54l2	79	66.576	Kryptolebias_marmoratus
ENSTNIG00000006049	-	100	77.440	ENSKMAG00000002931	-	75	77.350	Kryptolebias_marmoratus
ENSTNIG00000006049	-	90	80.163	ENSLBEG00000008534	-	75	80.622	Labrus_bergylta
ENSTNIG00000006049	-	98	67.366	ENSLBEG00000018779	rad54l2	78	65.905	Labrus_bergylta
ENSTNIG00000006049	-	99	63.088	ENSLACG00000016004	RAD54L2	76	62.877	Latimeria_chalumnae
ENSTNIG00000006049	-	89	72.004	ENSLOCG00000014222	rad54l2	94	71.803	Lepisosteus_oculatus
ENSTNIG00000006049	-	99	67.429	ENSLAFG00000005966	RAD54L2	74	67.308	Loxodonta_africana
ENSTNIG00000006049	-	100	66.877	ENSMFAG00000041836	RAD54L2	76	66.697	Macaca_fascicularis
ENSTNIG00000006049	-	100	66.817	ENSMMUG00000012002	RAD54L2	75	66.456	Macaca_mulatta
ENSTNIG00000006049	-	100	66.877	ENSMNEG00000035063	RAD54L2	77	66.697	Macaca_nemestrina
ENSTNIG00000006049	-	100	66.877	ENSMLEG00000034668	RAD54L2	76	66.697	Mandrillus_leucophaeus
ENSTNIG00000006049	-	99	67.806	ENSMAMG00000023761	rad54l2	76	68.261	Mastacembelus_armatus
ENSTNIG00000006049	-	99	79.471	ENSMAMG00000015321	-	79	79.257	Mastacembelus_armatus
ENSTNIG00000006049	-	99	79.254	ENSMZEG00005021308	-	74	79.204	Maylandia_zebra
ENSTNIG00000006049	-	98	68.767	ENSMZEG00005012584	rad54l2	77	67.536	Maylandia_zebra
ENSTNIG00000006049	-	98	70.128	ENSMGAG00000002911	RAD54L2	75	69.148	Meleagris_gallopavo
ENSTNIG00000006049	-	91	68.484	ENSMAUG00000011651	Rad54l2	91	68.385	Mesocricetus_auratus
ENSTNIG00000006049	-	100	67.058	ENSMICG00000002777	RAD54L2	76	66.877	Microcebus_murinus
ENSTNIG00000006049	-	100	66.907	ENSMOCG00000022448	Rad54l2	76	66.817	Microtus_ochrogaster
ENSTNIG00000006049	-	98	82.233	ENSMMOG00000016901	-	78	82.233	Mola_mola
ENSTNIG00000006049	-	97	68.144	ENSMMOG00000021709	rad54l2	76	67.775	Mola_mola
ENSTNIG00000006049	-	99	68.891	ENSMODG00000011850	RAD54L2	79	68.530	Monodelphis_domestica
ENSTNIG00000006049	-	93	78.420	ENSMALG00000015084	-	90	78.420	Monopterus_albus
ENSTNIG00000006049	-	100	66.817	MGP_CAROLIEiJ_G0032634	Rad54l2	75	66.727	Mus_caroli
ENSTNIG00000006049	-	100	66.817	ENSMUSG00000040661	Rad54l2	75	66.727	Mus_musculus
ENSTNIG00000006049	-	100	66.366	MGP_PahariEiJ_G0015502	Rad54l2	75	66.276	Mus_pahari
ENSTNIG00000006049	-	100	66.727	MGP_SPRETEiJ_G0033779	Rad54l2	75	66.637	Mus_spretus
ENSTNIG00000006049	-	100	66.907	ENSMPUG00000011865	RAD54L2	75	66.727	Mustela_putorius_furo
ENSTNIG00000006049	-	100	66.547	ENSMLUG00000004605	RAD54L2	75	66.366	Myotis_lucifugus
ENSTNIG00000006049	-	100	66.907	ENSNGAG00000015629	Rad54l2	75	66.727	Nannospalax_galili
ENSTNIG00000006049	-	99	79.618	ENSNBRG00000022847	-	75	78.905	Neolamprologus_brichardi
ENSTNIG00000006049	-	98	68.527	ENSNBRG00000001937	rad54l2	80	67.237	Neolamprologus_brichardi
ENSTNIG00000006049	-	100	66.817	ENSNLEG00000007038	RAD54L2	76	66.637	Nomascus_leucogenys
ENSTNIG00000006049	-	93	71.963	ENSMEUG00000009835	RAD54L2	75	71.028	Notamacropus_eugenii
ENSTNIG00000006049	-	100	66.907	ENSODEG00000018266	RAD54L2	75	66.727	Octodon_degus
ENSTNIG00000006049	-	98	68.359	ENSONIG00000014468	rad54l2	75	67.783	Oreochromis_niloticus
ENSTNIG00000006049	-	99	81.031	ENSONIG00000001663	-	76	80.787	Oreochromis_niloticus
ENSTNIG00000006049	-	100	69.938	ENSOANG00000012793	RAD54L2	77	69.589	Ornithorhynchus_anatinus
ENSTNIG00000006049	-	100	67.358	ENSOCUG00000017577	RAD54L2	75	67.178	Oryctolagus_cuniculus
ENSTNIG00000006049	-	99	76.385	ENSORLG00000002714	-	74	76.065	Oryzias_latipes
ENSTNIG00000006049	-	99	67.953	ENSORLG00000002276	rad54l2	74	68.022	Oryzias_latipes
ENSTNIG00000006049	-	99	68.198	ENSORLG00020003470	rad54l2	74	68.079	Oryzias_latipes_hni
ENSTNIG00000006049	-	99	76.299	ENSORLG00020019256	-	74	75.978	Oryzias_latipes_hni
ENSTNIG00000006049	-	100	75.918	ENSORLG00015013408	-	75	75.603	Oryzias_latipes_hsok
ENSTNIG00000006049	-	99	68.426	ENSORLG00015021530	rad54l2	76	68.244	Oryzias_latipes_hsok
ENSTNIG00000006049	-	99	66.993	ENSOMEG00000005597	rad54l2	74	66.696	Oryzias_melastigma
ENSTNIG00000006049	-	99	76.344	ENSOMEG00000008216	-	77	76.054	Oryzias_melastigma
ENSTNIG00000006049	-	81	69.042	ENSOGAG00000012442	RAD54L2	77	69.042	Otolemur_garnettii
ENSTNIG00000006049	-	99	67.338	ENSOARG00000007264	RAD54L2	75	66.546	Ovis_aries
ENSTNIG00000006049	-	100	66.817	ENSPPAG00000038472	RAD54L2	76	66.637	Pan_paniscus
ENSTNIG00000006049	-	100	66.907	ENSPPRG00000010212	RAD54L2	75	66.727	Panthera_pardus
ENSTNIG00000006049	-	100	66.907	ENSPTIG00000002240	RAD54L2	75	66.727	Panthera_tigris_altaica
ENSTNIG00000006049	-	100	66.817	ENSPTRG00000014974	RAD54L2	76	66.637	Pan_troglodytes
ENSTNIG00000006049	-	100	66.877	ENSPANG00000000857	RAD54L2	76	66.697	Papio_anubis
ENSTNIG00000006049	-	99	70.514	ENSPKIG00000001065	rad54l2	76	71.026	Paramormyrops_kingsleyae
ENSTNIG00000006049	-	90	69.733	ENSPSIG00000014346	RAD54L2	91	69.634	Pelodiscus_sinensis
ENSTNIG00000006049	-	99	74.361	ENSPMGG00000000641	-	79	74.040	Periophthalmus_magnuspinnatus
ENSTNIG00000006049	-	88	70.485	ENSPMGG00000002208	rad54l2	77	70.485	Periophthalmus_magnuspinnatus
ENSTNIG00000006049	-	100	67.116	ENSPEMG00000012051	Rad54l2	75	67.027	Peromyscus_maniculatus_bairdii
ENSTNIG00000006049	-	56	68.594	ENSPMAG00000001636	rad54l2	99	68.594	Petromyzon_marinus
ENSTNIG00000006049	-	93	70.328	ENSPCIG00000018143	RAD54L2	73	72.569	Phascolarctos_cinereus
ENSTNIG00000006049	-	98	66.787	ENSPFOG00000018644	rad54l2	73	66.517	Poecilia_formosa
ENSTNIG00000006049	-	100	76.071	ENSPFOG00000000197	-	76	76.250	Poecilia_formosa
ENSTNIG00000006049	-	98	67.313	ENSPLAG00000006015	rad54l2	73	66.728	Poecilia_latipinna
ENSTNIG00000006049	-	100	75.982	ENSPLAG00000013908	-	77	76.161	Poecilia_latipinna
ENSTNIG00000006049	-	98	67.893	ENSPMEG00000021535	rad54l2	76	67.399	Poecilia_mexicana
ENSTNIG00000006049	-	100	75.804	ENSPMEG00000009878	-	76	75.982	Poecilia_mexicana
ENSTNIG00000006049	-	99	75.853	ENSPREG00000013377	RAD54L2	75	76.212	Poecilia_reticulata
ENSTNIG00000006049	-	97	66.515	ENSPREG00000008628	rad54l2	80	66.332	Poecilia_reticulata
ENSTNIG00000006049	-	100	66.817	ENSPPYG00000013831	RAD54L2	78	66.637	Pongo_abelii
ENSTNIG00000006049	-	85	60.938	ENSPCAG00000011952	RAD54L2	69	60.938	Procavia_capensis
ENSTNIG00000006049	-	100	66.907	ENSPCOG00000015983	RAD54L2	75	66.727	Propithecus_coquereli
ENSTNIG00000006049	-	97	68.762	ENSPNYG00000020693	rad54l2	81	67.701	Pundamilia_nyererei
ENSTNIG00000006049	-	99	79.527	ENSPNYG00000011435	-	74	79.476	Pundamilia_nyererei
ENSTNIG00000006049	-	98	68.566	ENSPNAG00000006451	rad54l2	76	68.216	Pygocentrus_nattereri
ENSTNIG00000006049	-	99	70.864	ENSPNAG00000011583	-	77	70.756	Pygocentrus_nattereri
ENSTNIG00000006049	-	100	63.694	ENSRNOG00000013570	Rad54l2	75	63.604	Rattus_norvegicus
ENSTNIG00000006049	-	89	67.850	ENSRNOG00000049489	LOC102552166	91	67.748	Rattus_norvegicus
ENSTNIG00000006049	-	99	66.877	ENSRBIG00000032434	RAD54L2	83	66.697	Rhinopithecus_bieti
ENSTNIG00000006049	-	99	66.787	ENSRROG00000042309	RAD54L2	76	66.606	Rhinopithecus_roxellana
ENSTNIG00000006049	-	100	66.637	ENSSBOG00000002139	RAD54L2	75	66.456	Saimiri_boliviensis_boliviensis
ENSTNIG00000006049	-	100	68.956	ENSSHAG00000008604	RAD54L2	77	68.510	Sarcophilus_harrisii
ENSTNIG00000006049	-	100	72.646	ENSSFOG00015019014	rad54l2	77	72.287	Scleropages_formosus
ENSTNIG00000006049	-	99	66.247	ENSSMAG00000020933	rad54l2	74	65.617	Scophthalmus_maximus
ENSTNIG00000006049	-	100	76.726	ENSSMAG00000009978	-	75	76.814	Scophthalmus_maximus
ENSTNIG00000006049	-	98	80.346	ENSSDUG00000016711	-	75	79.533	Seriola_dumerili
ENSTNIG00000006049	-	99	67.722	ENSSDUG00000014268	rad54l2	79	67.387	Seriola_dumerili
ENSTNIG00000006049	-	98	80.259	ENSSLDG00000023388	-	77	79.525	Seriola_lalandi_dorsalis
ENSTNIG00000006049	-	99	67.387	ENSSLDG00000023959	rad54l2	80	66.847	Seriola_lalandi_dorsalis
ENSTNIG00000006049	-	99	67.751	ENSSPAG00000016532	rad54l2	77	67.296	Stegastes_partitus
ENSTNIG00000006049	-	98	79.431	ENSSPAG00000006371	-	79	78.539	Stegastes_partitus
ENSTNIG00000006049	-	100	66.727	ENSSSCG00000011425	RAD54L2	75	66.546	Sus_scrofa
ENSTNIG00000006049	-	98	69.791	ENSTGUG00000004888	RAD54L2	75	69.444	Taeniopygia_guttata
ENSTNIG00000006049	-	100	83.801	ENSTRUG00000011066	-	76	83.710	Takifugu_rubripes
ENSTNIG00000006049	-	99	66.817	ENSTRUG00000013962	rad54l2	77	64.481	Takifugu_rubripes
ENSTNIG00000006049	-	87	69.072	ENSTBEG00000003377	RAD54L2	74	70.563	Tupaia_belangeri
ENSTNIG00000006049	-	98	67.491	ENSUAMG00000020891	RAD54L2	79	67.308	Ursus_americanus
ENSTNIG00000006049	-	98	67.491	ENSUMAG00000021678	RAD54L2	79	67.493	Ursus_maritimus
ENSTNIG00000006049	-	100	66.907	ENSVVUG00000026874	RAD54L2	78	66.727	Vulpes_vulpes
ENSTNIG00000006049	-	99	67.684	ENSXETG00000000070	rad54l2	80	67.352	Xenopus_tropicalis
ENSTNIG00000006049	-	100	74.205	ENSXCOG00000002848	-	79	74.387	Xiphophorus_couchianus
ENSTNIG00000006049	-	98	64.825	ENSXCOG00000004961	rad54l2	75	64.312	Xiphophorus_couchianus
ENSTNIG00000006049	-	98	67.772	ENSXMAG00000017182	rad54l2	80	67.156	Xiphophorus_maculatus
ENSTNIG00000006049	-	100	75.536	ENSXMAG00000019370	-	76	75.893	Xiphophorus_maculatus