EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000006129 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2757 bases
Position: chrUn_random:85274841-85277597
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008874	RRM_1	PF00076.22	2.2e-27	1	2
ENSTNIP00000008874	RRM_1	PF00076.22	2.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000009045	-	1180	-	ENSTNIP00000008874	306 (aa)	-	H3CKU5

Gene Model

Click here to download ENSTNIG00000006129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000006129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000006129	trnau1apa	92	44.599	ENSTNIG00000000916	trnau1apb	95	42.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000006129	trnau1apa	98	57.096	ENSG00000180098	TRNAU1AP	98	57.096	Homo_sapiens
ENSTNIG00000006129	trnau1apa	100	78.205	ENSAPOG00000007148	TRNAU1AP	100	78.205	Acanthochromis_polyacanthus
ENSTNIG00000006129	trnau1apa	98	57.426	ENSAMEG00000011367	TRNAU1AP	95	59.582	Ailuropoda_melanoleuca
ENSTNIG00000006129	trnau1apa	97	92.135	ENSACIG00000004161	trnau1apa	98	92.135	Amphilophus_citrinellus
ENSTNIG00000006129	trnau1apa	100	77.670	ENSAOCG00000008056	trnau1apa	100	77.670	Amphiprion_ocellaris
ENSTNIG00000006129	trnau1apa	100	77.670	ENSAPEG00000008868	trnau1apa	100	77.670	Amphiprion_percula
ENSTNIG00000006129	trnau1apa	100	79.048	ENSATEG00000012140	trnau1apa	100	79.048	Anabas_testudineus
ENSTNIG00000006129	trnau1apa	92	56.491	ENSAPLG00000002606	TRNAU1AP	98	57.042	Anas_platyrhynchos
ENSTNIG00000006129	trnau1apa	92	45.329	ENSACAG00000003995	-	94	45.017	Anolis_carolinensis
ENSTNIG00000006129	trnau1apa	75	33.333	ENSACAG00000004205	-	86	33.740	Anolis_carolinensis
ENSTNIG00000006129	trnau1apa	98	57.096	ENSANAG00000018976	TRNAU1AP	98	57.096	Aotus_nancymaae
ENSTNIG00000006129	trnau1apa	100	77.670	ENSACLG00000018515	trnau1apa	100	77.670	Astatotilapia_calliptera
ENSTNIG00000006129	trnau1apa	99	51.768	ENSAMXG00000013750	trnau1apa	97	51.447	Astyanax_mexicanus
ENSTNIG00000006129	trnau1apa	93	69.318	ENSAMXG00000029240	-	97	69.318	Astyanax_mexicanus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSBTAG00000010393	TRNAU1AP	98	57.096	Bos_taurus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSCJAG00000009717	TRNAU1AP	98	57.096	Callithrix_jacchus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSCAFG00000011735	TRNAU1AP	95	59.233	Canis_familiaris
ENSTNIG00000006129	trnau1apa	98	57.096	ENSCAFG00020023584	TRNAU1AP	95	59.233	Canis_lupus_dingo
ENSTNIG00000006129	trnau1apa	98	57.096	ENSCHIG00000023215	TRNAU1AP	98	57.096	Capra_hircus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSTSYG00000003506	TRNAU1AP	98	57.096	Carlito_syrichta
ENSTNIG00000006129	trnau1apa	98	56.766	ENSCPOG00000001925	TRNAU1AP	95	58.885	Cavia_porcellus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSCCAG00000037506	TRNAU1AP	98	57.096	Cebus_capucinus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSCATG00000044617	TRNAU1AP	98	57.096	Cercocebus_atys
ENSTNIG00000006129	trnau1apa	98	56.766	ENSCLAG00000008223	TRNAU1AP	95	58.885	Chinchilla_lanigera
ENSTNIG00000006129	trnau1apa	98	57.096	ENSCSAG00000001014	TRNAU1AP	98	57.096	Chlorocebus_sabaeus
ENSTNIG00000006129	trnau1apa	95	54.915	ENSCPBG00000000121	TRNAU1AP	100	55.254	Chrysemys_picta_bellii
ENSTNIG00000006129	trnau1apa	55	48.824	ENSCSAVG00000011781	-	91	48.555	Ciona_savignyi
ENSTNIG00000006129	trnau1apa	98	49.175	ENSCANG00000041949	TRNAU1AP	93	53.631	Colobus_angolensis_palliatus
ENSTNIG00000006129	trnau1apa	98	56.766	ENSCGRG00001004713	Trnau1ap	99	56.536	Cricetulus_griseus_chok1gshd
ENSTNIG00000006129	trnau1apa	98	56.766	ENSCGRG00000014532	Trnau1ap	99	56.536	Cricetulus_griseus_crigri
ENSTNIG00000006129	trnau1apa	100	75.000	ENSCSEG00000006663	trnau1apa	90	90.370	Cynoglossus_semilaevis
ENSTNIG00000006129	trnau1apa	99	75.081	ENSCVAG00000018069	trnau1apa	99	76.699	Cyprinodon_variegatus
ENSTNIG00000006129	trnau1apa	99	49.675	ENSDARG00000101323	trnau1apa	95	49.675	Danio_rerio
ENSTNIG00000006129	trnau1apa	98	57.096	ENSDNOG00000033009	TRNAU1AP	98	57.096	Dasypus_novemcinctus
ENSTNIG00000006129	trnau1apa	56	59.884	ENSDNOG00000047959	-	89	59.884	Dasypus_novemcinctus
ENSTNIG00000006129	trnau1apa	97	54.849	ENSDORG00000006349	Trnau1ap	97	59.244	Dipodomys_ordii
ENSTNIG00000006129	trnau1apa	93	34.146	FBgn0031607	CG15440	50	46.108	Drosophila_melanogaster
ENSTNIG00000006129	trnau1apa	84	53.846	ENSETEG00000012594	TRNAU1AP	93	56.148	Echinops_telfairi
ENSTNIG00000006129	trnau1apa	61	47.727	ENSEBUG00000006349	-	72	47.727	Eptatretus_burgeri
ENSTNIG00000006129	trnau1apa	98	57.096	ENSEASG00005010062	TRNAU1AP	90	67.123	Equus_asinus_asinus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSECAG00000012980	TRNAU1AP	90	67.123	Equus_caballus
ENSTNIG00000006129	trnau1apa	100	68.051	ENSELUG00000017686	trnau1apa	100	68.571	Esox_lucius
ENSTNIG00000006129	trnau1apa	93	78.409	ENSELUG00000022790	-	95	78.409	Esox_lucius
ENSTNIG00000006129	trnau1apa	98	57.096	ENSFCAG00000013401	TRNAU1AP	98	57.096	Felis_catus
ENSTNIG00000006129	trnau1apa	95	54.576	ENSFALG00000001371	TRNAU1AP	100	54.915	Ficedula_albicollis
ENSTNIG00000006129	trnau1apa	98	57.096	ENSFDAG00000018599	TRNAU1AP	95	59.233	Fukomys_damarensis
ENSTNIG00000006129	trnau1apa	78	80.645	ENSFHEG00000018232	trnau1apa	81	80.408	Fundulus_heteroclitus
ENSTNIG00000006129	trnau1apa	100	59.807	ENSGMOG00000016508	trnau1apa	99	59.807	Gadus_morhua
ENSTNIG00000006129	trnau1apa	69	37.838	ENSGALG00000012721	C2H6orf52	90	34.981	Gallus_gallus
ENSTNIG00000006129	trnau1apa	99	54.575	ENSGALG00000001310	-	99	54.902	Gallus_gallus
ENSTNIG00000006129	trnau1apa	80	81.452	ENSGAFG00000004928	trnau1apa	90	82.917	Gambusia_affinis
ENSTNIG00000006129	trnau1apa	100	78.247	ENSGACG00000001443	trnau1apa	100	78.247	Gasterosteus_aculeatus
ENSTNIG00000006129	trnau1apa	95	54.915	ENSGAGG00000004940	TRNAU1AP	100	55.254	Gopherus_agassizii
ENSTNIG00000006129	trnau1apa	98	57.096	ENSGGOG00000003511	TRNAU1AP	98	57.096	Gorilla_gorilla
ENSTNIG00000006129	trnau1apa	100	76.115	ENSHBUG00000002510	trnau1apa	94	91.852	Haplochromis_burtoni
ENSTNIG00000006129	trnau1apa	98	57.096	ENSHGLG00000010380	TRNAU1AP	95	59.233	Heterocephalus_glaber_female
ENSTNIG00000006129	trnau1apa	98	55.446	ENSHGLG00100012699	TRNAU1AP	95	57.491	Heterocephalus_glaber_male
ENSTNIG00000006129	trnau1apa	99	75.241	ENSHCOG00000014770	trnau1apa	99	71.383	Hippocampus_comes
ENSTNIG00000006129	trnau1apa	98	57.096	ENSSTOG00000000079	TRNAU1AP	98	57.096	Ictidomys_tridecemlineatus
ENSTNIG00000006129	trnau1apa	98	56.436	ENSJJAG00000010128	Trnau1ap	99	56.536	Jaculus_jaculus
ENSTNIG00000006129	trnau1apa	100	75.563	ENSKMAG00000001230	trnau1apa	100	75.241	Kryptolebias_marmoratus
ENSTNIG00000006129	trnau1apa	100	74.051	ENSLBEG00000011683	trnau1apa	100	74.051	Labrus_bergylta
ENSTNIG00000006129	trnau1apa	99	50.000	ENSLACG00000005541	TRNAU1AP	99	49.511	Latimeria_chalumnae
ENSTNIG00000006129	trnau1apa	98	57.516	ENSLOCG00000004041	trnau1apa	99	56.579	Lepisosteus_oculatus
ENSTNIG00000006129	trnau1apa	98	57.426	ENSLAFG00000007628	TRNAU1AP	98	57.426	Loxodonta_africana
ENSTNIG00000006129	trnau1apa	98	70.370	ENSMFAG00000043751	TRNAU1AP	98	57.096	Macaca_fascicularis
ENSTNIG00000006129	trnau1apa	98	57.096	ENSMMUG00000006561	TRNAU1AP	98	57.096	Macaca_mulatta
ENSTNIG00000006129	trnau1apa	98	70.370	ENSMNEG00000044201	TRNAU1AP	98	57.096	Macaca_nemestrina
ENSTNIG00000006129	trnau1apa	98	70.370	ENSMLEG00000015649	TRNAU1AP	98	57.096	Mandrillus_leucophaeus
ENSTNIG00000006129	trnau1apa	99	79.100	ENSMAMG00000001247	trnau1apa	100	79.100	Mastacembelus_armatus
ENSTNIG00000006129	trnau1apa	100	77.670	ENSMZEG00005017722	trnau1apa	100	77.670	Maylandia_zebra
ENSTNIG00000006129	trnau1apa	96	54.209	ENSMGAG00000002105	TRNAU1AP	100	55.184	Meleagris_gallopavo
ENSTNIG00000006129	trnau1apa	98	57.096	ENSMICG00000008386	TRNAU1AP	98	57.096	Microcebus_murinus
ENSTNIG00000006129	trnau1apa	99	56.536	ENSMOCG00000011189	Trnau1ap	99	56.536	Microtus_ochrogaster
ENSTNIG00000006129	trnau1apa	100	68.710	ENSMMOG00000012107	trnau1apa	99	67.742	Mola_mola
ENSTNIG00000006129	trnau1apa	98	55.776	ENSMODG00000010927	TRNAU1AP	98	55.446	Monodelphis_domestica
ENSTNIG00000006129	trnau1apa	100	78.065	ENSMALG00000016778	trnau1apa	100	78.387	Monopterus_albus
ENSTNIG00000006129	trnau1apa	98	56.766	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	63.291	Mus_caroli
ENSTNIG00000006129	trnau1apa	98	56.766	ENSMUSG00000028898	Trnau1ap	92	63.291	Mus_musculus
ENSTNIG00000006129	trnau1apa	98	56.766	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSTNIG00000006129	trnau1apa	98	56.766	MGP_SPRETEiJ_G0027544	Trnau1ap	92	63.291	Mus_spretus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSMPUG00000015511	TRNAU1AP	98	57.096	Mustela_putorius_furo
ENSTNIG00000006129	trnau1apa	98	57.096	ENSMLUG00000012586	TRNAU1AP	98	57.096	Myotis_lucifugus
ENSTNIG00000006129	trnau1apa	99	56.129	ENSNGAG00000015881	Trnau1ap	99	56.209	Nannospalax_galili
ENSTNIG00000006129	trnau1apa	100	66.667	ENSNBRG00000001758	trnau1apa	99	66.667	Neolamprologus_brichardi
ENSTNIG00000006129	trnau1apa	98	70.370	ENSNLEG00000009822	TRNAU1AP	98	57.096	Nomascus_leucogenys
ENSTNIG00000006129	trnau1apa	96	55.405	ENSMEUG00000006117	TRNAU1AP	99	55.068	Notamacropus_eugenii
ENSTNIG00000006129	trnau1apa	56	62.069	ENSOPRG00000007084	-	54	62.069	Ochotona_princeps
ENSTNIG00000006129	trnau1apa	98	56.766	ENSODEG00000002970	TRNAU1AP	95	58.885	Octodon_degus
ENSTNIG00000006129	trnau1apa	80	79.839	ENSONIG00000004715	trnau1apa	97	79.839	Oreochromis_niloticus
ENSTNIG00000006129	trnau1apa	92	44.483	ENSOANG00000005325	-	94	44.406	Ornithorhynchus_anatinus
ENSTNIG00000006129	trnau1apa	98	55.776	ENSOCUG00000011704	-	95	57.840	Oryctolagus_cuniculus
ENSTNIG00000006129	trnau1apa	98	49.338	ENSOCUG00000002353	-	98	49.338	Oryctolagus_cuniculus
ENSTNIG00000006129	trnau1apa	85	46.388	ENSOCUG00000006834	-	97	46.008	Oryctolagus_cuniculus
ENSTNIG00000006129	trnau1apa	100	75.484	ENSORLG00000010428	trnau1apa	100	75.806	Oryzias_latipes
ENSTNIG00000006129	trnau1apa	100	75.484	ENSORLG00020000926	trnau1ap	100	75.806	Oryzias_latipes_hni
ENSTNIG00000006129	trnau1apa	100	75.484	ENSORLG00015009858	trnau1ap	100	75.806	Oryzias_latipes_hsok
ENSTNIG00000006129	trnau1apa	100	75.806	ENSOMEG00000007873	trnau1apa	100	75.484	Oryzias_melastigma
ENSTNIG00000006129	trnau1apa	98	57.096	ENSOGAG00000002274	TRNAU1AP	98	57.096	Otolemur_garnettii
ENSTNIG00000006129	trnau1apa	98	57.096	ENSOARG00000002843	TRNAU1AP	98	57.096	Ovis_aries
ENSTNIG00000006129	trnau1apa	98	57.096	ENSPPAG00000033927	TRNAU1AP	98	57.096	Pan_paniscus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSPPRG00000004416	TRNAU1AP	98	57.096	Panthera_pardus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSPTIG00000016677	TRNAU1AP	98	57.096	Panthera_tigris_altaica
ENSTNIG00000006129	trnau1apa	91	50.000	ENSPTRG00000000434	-	94	49.462	Pan_troglodytes
ENSTNIG00000006129	trnau1apa	98	57.096	ENSPANG00000016019	TRNAU1AP	98	57.096	Papio_anubis
ENSTNIG00000006129	trnau1apa	92	78.409	ENSPKIG00000022205	-	95	78.409	Paramormyrops_kingsleyae
ENSTNIG00000006129	trnau1apa	93	58.333	ENSPKIG00000015511	trnau1apa	93	58.333	Paramormyrops_kingsleyae
ENSTNIG00000006129	trnau1apa	95	55.518	ENSPSIG00000006864	TRNAU1AP	100	55.254	Pelodiscus_sinensis
ENSTNIG00000006129	trnau1apa	97	66.216	ENSPMGG00000023893	trnau1apa	96	65.101	Periophthalmus_magnuspinnatus
ENSTNIG00000006129	trnau1apa	98	56.436	ENSPEMG00000007877	Trnau1ap	99	56.209	Peromyscus_maniculatus_bairdii
ENSTNIG00000006129	trnau1apa	74	50.431	ENSPMAG00000005934	trnau1apa	96	49.138	Petromyzon_marinus
ENSTNIG00000006129	trnau1apa	55	52.601	ENSPMAG00000000592	trnau1apa	95	52.601	Petromyzon_marinus
ENSTNIG00000006129	trnau1apa	99	75.081	ENSPFOG00000008100	trnau1apa	99	75.728	Poecilia_formosa
ENSTNIG00000006129	trnau1apa	95	74.747	ENSPLAG00000010236	trnau1apa	99	75.421	Poecilia_latipinna
ENSTNIG00000006129	trnau1apa	99	73.052	ENSPMEG00000016387	trnau1apa	97	73.701	Poecilia_mexicana
ENSTNIG00000006129	trnau1apa	89	81.053	ENSPREG00000019821	trnau1apa	98	81.053	Poecilia_reticulata
ENSTNIG00000006129	trnau1apa	86	48.699	ENSPPYG00000001639	-	98	48.881	Pongo_abelii
ENSTNIG00000006129	trnau1apa	97	44.000	ENSPCOG00000023470	-	95	46.975	Propithecus_coquereli
ENSTNIG00000006129	trnau1apa	98	57.096	ENSPCOG00000027712	-	98	57.096	Propithecus_coquereli
ENSTNIG00000006129	trnau1apa	98	57.096	ENSPVAG00000017214	TRNAU1AP	98	57.096	Pteropus_vampyrus
ENSTNIG00000006129	trnau1apa	100	80.741	ENSPNYG00000010130	trnau1apa	99	80.741	Pundamilia_nyererei
ENSTNIG00000006129	trnau1apa	99	51.140	ENSPNAG00000024905	trnau1apa	97	51.140	Pygocentrus_nattereri
ENSTNIG00000006129	trnau1apa	82	58.039	ENSRNOG00000055344	Trnau1ap	82	58.039	Rattus_norvegicus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSRBIG00000029083	TRNAU1AP	98	57.096	Rhinopithecus_bieti
ENSTNIG00000006129	trnau1apa	98	57.096	ENSRROG00000029128	TRNAU1AP	98	57.096	Rhinopithecus_roxellana
ENSTNIG00000006129	trnau1apa	98	57.096	ENSSBOG00000021299	TRNAU1AP	98	57.096	Saimiri_boliviensis_boliviensis
ENSTNIG00000006129	trnau1apa	98	55.446	ENSSHAG00000008108	TRNAU1AP	98	55.116	Sarcophilus_harrisii
ENSTNIG00000006129	trnau1apa	100	74.516	ENSSMAG00000020851	trnau1apa	100	76.038	Scophthalmus_maximus
ENSTNIG00000006129	trnau1apa	100	76.825	ENSSDUG00000011734	trnau1apa	100	76.825	Seriola_dumerili
ENSTNIG00000006129	trnau1apa	100	62.013	ENSSLDG00000012101	trnau1apa	99	62.013	Seriola_lalandi_dorsalis
ENSTNIG00000006129	trnau1apa	96	56.757	ENSSARG00000007536	TRNAU1AP	95	58.929	Sorex_araneus
ENSTNIG00000006129	trnau1apa	63	46.154	ENSSPUG00000010415	-	99	44.615	Sphenodon_punctatus
ENSTNIG00000006129	trnau1apa	98	52.805	ENSSPUG00000010400	-	99	53.135	Sphenodon_punctatus
ENSTNIG00000006129	trnau1apa	100	79.100	ENSSPAG00000005029	trnau1apa	100	79.100	Stegastes_partitus
ENSTNIG00000006129	trnau1apa	98	57.096	ENSSSCG00000030284	TRNAU1AP	98	57.096	Sus_scrofa
ENSTNIG00000006129	trnau1apa	97	55.184	ENSTGUG00000000735	-	100	55.518	Taeniopygia_guttata
ENSTNIG00000006129	trnau1apa	69	41.121	ENSTGUG00000005908	-	99	40.654	Taeniopygia_guttata
ENSTNIG00000006129	trnau1apa	100	87.255	ENSTRUG00000003352	trnau1apa	100	84.641	Takifugu_rubripes
ENSTNIG00000006129	trnau1apa	84	51.923	ENSTBEG00000008049	-	93	53.689	Tupaia_belangeri
ENSTNIG00000006129	trnau1apa	98	57.096	ENSTTRG00000001854	TRNAU1AP	98	57.096	Tursiops_truncatus
ENSTNIG00000006129	trnau1apa	94	57.192	ENSUAMG00000008789	TRNAU1AP	99	57.192	Ursus_americanus
ENSTNIG00000006129	trnau1apa	98	56.766	ENSUMAG00000011068	TRNAU1AP	98	56.766	Ursus_maritimus
ENSTNIG00000006129	trnau1apa	98	49.841	ENSVPAG00000006778	TRNAU1AP	99	49.841	Vicugna_pacos
ENSTNIG00000006129	trnau1apa	97	56.478	ENSVVUG00000012518	TRNAU1AP	88	58.596	Vulpes_vulpes
ENSTNIG00000006129	trnau1apa	99	74.110	ENSXMAG00000017361	trnau1apa	99	75.728	Xiphophorus_maculatus