EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000006216 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 10890 bases
Position: chrUn_random:34952382-34963271
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000008965	AARP2CN	PF08142.12	1.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000009136	-	3798	-	ENSTNIP00000008965	1266 (aa)	-	H3CL36

Gene Model

Click here to download ENSTNIG00000006216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000006216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000006216	bms1	90	65.135	ENSG00000165733	BMS1	99	59.814	Homo_sapiens
ENSTNIG00000006216	bms1	72	83.448	ENSAPOG00000002296	bms1	99	75.962	Acanthochromis_polyacanthus
ENSTNIG00000006216	bms1	84	70.387	ENSAMEG00000016834	BMS1	99	58.631	Ailuropoda_melanoleuca
ENSTNIG00000006216	bms1	79	86.523	ENSACIG00000002588	bms1	99	71.763	Amphilophus_citrinellus
ENSTNIG00000006216	bms1	87	76.214	ENSAOCG00000018088	bms1	98	75.243	Amphiprion_ocellaris
ENSTNIG00000006216	bms1	86	76.543	ENSAPEG00000014673	bms1	97	75.520	Amphiprion_percula
ENSTNIG00000006216	bms1	89	76.038	ENSATEG00000023465	bms1	99	76.198	Anabas_testudineus
ENSTNIG00000006216	bms1	84	66.903	ENSAPLG00000003759	BMS1	94	66.437	Anas_platyrhynchos
ENSTNIG00000006216	bms1	89	62.264	ENSACAG00000004537	-	99	57.242	Anolis_carolinensis
ENSTNIG00000006216	bms1	89	74.318	ENSACLG00000001294	bms1	99	73.194	Astatotilapia_calliptera
ENSTNIG00000006216	bms1	82	75.455	ENSAMXG00000011236	bms1	95	70.323	Astyanax_mexicanus
ENSTNIG00000006216	bms1	88	66.505	ENSBTAG00000012878	BMS1	99	59.954	Bos_taurus
ENSTNIG00000006216	bms1	79	53.865	WBGene00022021	Y61A9LA.10	94	53.731	Caenorhabditis_elegans
ENSTNIG00000006216	bms1	90	65.501	ENSCJAG00000021705	BMS1	99	59.302	Callithrix_jacchus
ENSTNIG00000006216	bms1	88	65.964	ENSCAFG00000007114	BMS1	99	59.308	Canis_familiaris
ENSTNIG00000006216	bms1	88	65.964	ENSCAFG00020025282	BMS1	99	59.308	Canis_lupus_dingo
ENSTNIG00000006216	bms1	88	66.828	ENSCHIG00000023251	BMS1	99	59.587	Capra_hircus
ENSTNIG00000006216	bms1	99	56.542	ENSCAPG00000008652	BMS1	99	55.735	Cavia_aperea
ENSTNIG00000006216	bms1	99	59.579	ENSCPOG00000000502	BMS1	99	58.737	Cavia_porcellus
ENSTNIG00000006216	bms1	89	55.714	ENSCCAG00000024969	-	99	48.908	Cebus_capucinus
ENSTNIG00000006216	bms1	68	56.427	ENSCATG00000008695	-	96	45.880	Cercocebus_atys
ENSTNIG00000006216	bms1	50	65.452	ENSCATG00000030625	-	99	59.596	Cercocebus_atys
ENSTNIG00000006216	bms1	88	65.058	ENSCLAG00000002446	BMS1	99	59.211	Chinchilla_lanigera
ENSTNIG00000006216	bms1	50	65.452	ENSCSAG00000011118	BMS1	99	59.938	Chlorocebus_sabaeus
ENSTNIG00000006216	bms1	83	68.807	ENSCHOG00000011055	BMS1	99	58.282	Choloepus_hoffmanni
ENSTNIG00000006216	bms1	89	66.290	ENSCPBG00000025581	BMS1	89	66.452	Chrysemys_picta_bellii
ENSTNIG00000006216	bms1	82	56.027	ENSCING00000003181	-	98	55.098	Ciona_intestinalis
ENSTNIG00000006216	bms1	53	67.857	ENSCSAVG00000004113	-	82	57.225	Ciona_savignyi
ENSTNIG00000006216	bms1	90	65.769	ENSCANG00000011609	BMS1	99	59.645	Colobus_angolensis_palliatus
ENSTNIG00000006216	bms1	88	65.120	ENSCGRG00001019461	Bms1	99	58.933	Cricetulus_griseus_chok1gshd
ENSTNIG00000006216	bms1	88	65.120	ENSCGRG00000009016	Bms1	99	58.933	Cricetulus_griseus_crigri
ENSTNIG00000006216	bms1	82	81.455	ENSCSEG00000002469	bms1	99	65.536	Cynoglossus_semilaevis
ENSTNIG00000006216	bms1	87	75.080	ENSCVAG00000008371	bms1	98	74.116	Cyprinodon_variegatus
ENSTNIG00000006216	bms1	89	71.146	ENSDARG00000054154	bms1	97	69.797	Danio_rerio
ENSTNIG00000006216	bms1	88	66.124	ENSDNOG00000015761	BMS1	99	59.382	Dasypus_novemcinctus
ENSTNIG00000006216	bms1	88	66.179	ENSDORG00000002982	Bms1	99	59.594	Dipodomys_ordii
ENSTNIG00000006216	bms1	79	57.740	FBgn0036686	CG7728	91	57.702	Drosophila_melanogaster
ENSTNIG00000006216	bms1	69	68.721	ENSETEG00000009554	BMS1	91	62.500	Echinops_telfairi
ENSTNIG00000006216	bms1	84	70.023	ENSEASG00005006894	BMS1	99	58.990	Equus_asinus_asinus
ENSTNIG00000006216	bms1	90	65.039	ENSECAG00000001358	BMS1	99	58.914	Equus_caballus
ENSTNIG00000006216	bms1	83	78.522	ENSELUG00000001756	bms1	99	64.799	Esox_lucius
ENSTNIG00000006216	bms1	83	70.252	ENSFCAG00000011220	BMS1	99	58.605	Felis_catus
ENSTNIG00000006216	bms1	89	65.161	ENSFALG00000006882	BMS1	90	64.465	Ficedula_albicollis
ENSTNIG00000006216	bms1	99	57.672	ENSFDAG00000001422	BMS1	99	58.320	Fukomys_damarensis
ENSTNIG00000006216	bms1	87	75.050	ENSFHEG00000003367	bms1	98	74.152	Fundulus_heteroclitus
ENSTNIG00000006216	bms1	90	69.872	ENSGMOG00000000718	bms1	99	69.712	Gadus_morhua
ENSTNIG00000006216	bms1	95	69.266	ENSGALG00000002624	BMS1	99	59.254	Gallus_gallus
ENSTNIG00000006216	bms1	99	67.469	ENSGACG00000015334	bms1	99	66.795	Gasterosteus_aculeatus
ENSTNIG00000006216	bms1	99	58.366	ENSGAGG00000003467	BMS1	99	59.659	Gopherus_agassizii
ENSTNIG00000006216	bms1	89	74.318	ENSHBUG00000022628	bms1	99	73.194	Haplochromis_burtoni
ENSTNIG00000006216	bms1	99	58.736	ENSHGLG00000000477	BMS1	99	58.411	Heterocephalus_glaber_female
ENSTNIG00000006216	bms1	99	58.736	ENSHGLG00100002176	BMS1	99	58.411	Heterocephalus_glaber_male
ENSTNIG00000006216	bms1	89	73.231	ENSHCOG00000017604	bms1	99	72.186	Hippocampus_comes
ENSTNIG00000006216	bms1	83	75.682	ENSIPUG00000017855	bms1	97	70.080	Ictalurus_punctatus
ENSTNIG00000006216	bms1	88	66.069	ENSSTOG00000015063	BMS1	99	59.566	Ictidomys_tridecemlineatus
ENSTNIG00000006216	bms1	83	70.709	ENSJJAG00000017328	Bms1	99	59.380	Jaculus_jaculus
ENSTNIG00000006216	bms1	56	71.645	ENSKMAG00000021982	bms1	94	70.909	Kryptolebias_marmoratus
ENSTNIG00000006216	bms1	83	80.365	ENSLBEG00000028208	bms1	99	74.286	Labrus_bergylta
ENSTNIG00000006216	bms1	88	63.077	ENSLACG00000001600	BMS1	99	54.903	Latimeria_chalumnae
ENSTNIG00000006216	bms1	87	69.778	ENSLOCG00000012914	bms1	97	70.411	Lepisosteus_oculatus
ENSTNIG00000006216	bms1	99	57.754	ENSLAFG00000006250	BMS1	99	58.136	Loxodonta_africana
ENSTNIG00000006216	bms1	82	64.466	ENSMFAG00000037771	BMS1	99	63.277	Macaca_fascicularis
ENSTNIG00000006216	bms1	71	56.468	ENSMLEG00000029084	-	83	56.391	Mandrillus_leucophaeus
ENSTNIG00000006216	bms1	99	71.080	ENSMAMG00000020855	bms1	99	75.641	Mastacembelus_armatus
ENSTNIG00000006216	bms1	89	74.318	ENSMZEG00005005663	bms1	99	73.194	Maylandia_zebra
ENSTNIG00000006216	bms1	85	64.943	ENSMGAG00000001170	BMS1	99	58.533	Meleagris_gallopavo
ENSTNIG00000006216	bms1	99	59.173	ENSMAUG00000002195	Bms1	99	59.024	Mesocricetus_auratus
ENSTNIG00000006216	bms1	89	65.705	ENSMICG00000009977	BMS1	99	58.270	Microcebus_murinus
ENSTNIG00000006216	bms1	93	64.573	ENSMOCG00000002038	Bms1	99	57.940	Microtus_ochrogaster
ENSTNIG00000006216	bms1	87	77.433	ENSMMOG00000000977	bms1	99	74.920	Mola_mola
ENSTNIG00000006216	bms1	89	64.848	ENSMODG00000001177	BMS1	99	58.529	Monodelphis_domestica
ENSTNIG00000006216	bms1	92	74.400	ENSMALG00000009680	bms1	99	73.440	Monopterus_albus
ENSTNIG00000006216	bms1	65	71.930	MGP_CAROLIEiJ_G0028785	-	76	71.149	Mus_caroli
ENSTNIG00000006216	bms1	99	58.255	ENSMUSG00000030138	Bms1	99	59.116	Mus_musculus
ENSTNIG00000006216	bms1	99	58.268	MGP_SPRETEiJ_G0029816	Bms1	99	59.116	Mus_spretus
ENSTNIG00000006216	bms1	90	65.094	ENSMPUG00000017276	BMS1	99	59.248	Mustela_putorius_furo
ENSTNIG00000006216	bms1	89	66.019	ENSMLUG00000003260	BMS1	99	59.339	Myotis_lucifugus
ENSTNIG00000006216	bms1	80	64.782	ENSNGAG00000015258	Bms1	96	63.780	Nannospalax_galili
ENSTNIG00000006216	bms1	50	63.233	ENSNLEG00000015791	BMS1	99	58.760	Nomascus_leucogenys
ENSTNIG00000006216	bms1	81	72.530	ENSOPRG00000005195	BMS1	80	72.530	Ochotona_princeps
ENSTNIG00000006216	bms1	89	63.799	ENSODEG00000005554	BMS1	99	58.385	Octodon_degus
ENSTNIG00000006216	bms1	90	74.437	ENSONIG00000007227	bms1	99	73.312	Oreochromis_niloticus
ENSTNIG00000006216	bms1	89	63.974	ENSOANG00000000662	-	99	57.033	Ornithorhynchus_anatinus
ENSTNIG00000006216	bms1	88	66.234	ENSOCUG00000005354	BMS1	99	59.691	Oryctolagus_cuniculus
ENSTNIG00000006216	bms1	88	77.199	ENSORLG00000014655	bms1	98	76.423	Oryzias_latipes
ENSTNIG00000006216	bms1	83	79.587	ENSORLG00020016246	bms1	95	75.367	Oryzias_latipes_hni
ENSTNIG00000006216	bms1	84	79.233	ENSORLG00015014183	bms1	97	74.560	Oryzias_latipes_hsok
ENSTNIG00000006216	bms1	83	80.549	ENSOMEG00000015042	bms1	98	76.423	Oryzias_melastigma
ENSTNIG00000006216	bms1	89	65.210	ENSOGAG00000006511	BMS1	99	58.436	Otolemur_garnettii
ENSTNIG00000006216	bms1	88	66.990	ENSOARG00000003900	BMS1	99	59.482	Ovis_aries
ENSTNIG00000006216	bms1	90	64.410	ENSPPAG00000027837	BMS1	99	57.132	Pan_paniscus
ENSTNIG00000006216	bms1	99	59.119	ENSPPRG00000001311	BMS1	99	58.649	Panthera_pardus
ENSTNIG00000006216	bms1	83	70.252	ENSPTIG00000009652	BMS1	99	57.631	Panthera_tigris_altaica
ENSTNIG00000006216	bms1	90	65.506	ENSPTRG00000002441	BMS1	99	59.845	Pan_troglodytes
ENSTNIG00000006216	bms1	89	69.305	ENSPKIG00000008165	bms1	90	71.451	Paramormyrops_kingsleyae
ENSTNIG00000006216	bms1	84	67.161	ENSPSIG00000006481	BMS1	99	58.747	Pelodiscus_sinensis
ENSTNIG00000006216	bms1	88	64.427	ENSPEMG00000022467	Bms1	99	53.739	Peromyscus_maniculatus_bairdii
ENSTNIG00000006216	bms1	89	65.316	ENSPCIG00000001339	BMS1	98	68.820	Phascolarctos_cinereus
ENSTNIG00000006216	bms1	83	81.925	ENSPFOG00000015180	bms1	99	75.203	Poecilia_formosa
ENSTNIG00000006216	bms1	82	82.160	ENSPMEG00000023176	bms1	94	74.634	Poecilia_mexicana
ENSTNIG00000006216	bms1	82	81.925	ENSPREG00000002695	bms1	99	74.878	Poecilia_reticulata
ENSTNIG00000006216	bms1	61	73.469	ENSPCAG00000014528	BMS1	76	62.023	Procavia_capensis
ENSTNIG00000006216	bms1	85	62.156	ENSPCOG00000023834	-	99	56.414	Propithecus_coquereli
ENSTNIG00000006216	bms1	99	58.540	ENSPVAG00000000725	BMS1	99	58.933	Pteropus_vampyrus
ENSTNIG00000006216	bms1	91	72.849	ENSPNYG00000018866	bms1	96	69.983	Pundamilia_nyererei
ENSTNIG00000006216	bms1	81	76.147	ENSPNAG00000000676	bms1	99	63.601	Pygocentrus_nattereri
ENSTNIG00000006216	bms1	71	65.404	ENSRNOG00000006576	Bms1	99	57.810	Rattus_norvegicus
ENSTNIG00000006216	bms1	84	67.431	ENSRROG00000040101	BMS1	99	58.417	Rhinopithecus_roxellana
ENSTNIG00000006216	bms1	71	47.856	YPL217C	-	75	52.493	Saccharomyces_cerevisiae
ENSTNIG00000006216	bms1	83	69.932	ENSSBOG00000035778	BMS1	99	59.568	Saimiri_boliviensis_boliviensis
ENSTNIG00000006216	bms1	91	73.871	ENSSFOG00015022313	bms1	99	65.382	Scleropages_formosus
ENSTNIG00000006216	bms1	83	82.609	ENSSMAG00000019966	bms1	99	74.720	Scophthalmus_maximus
ENSTNIG00000006216	bms1	89	75.929	ENSSDUG00000016875	bms1	96	75.684	Seriola_dumerili
ENSTNIG00000006216	bms1	89	75.444	ENSSLDG00000015199	bms1	99	75.201	Seriola_lalandi_dorsalis
ENSTNIG00000006216	bms1	83	70.938	ENSSPUG00000014454	BMS1	99	59.053	Sphenodon_punctatus
ENSTNIG00000006216	bms1	83	70.938	ENSSSCG00000010198	BMS1	99	59.248	Sus_scrofa
ENSTNIG00000006216	bms1	89	65.267	ENSTGUG00000006302	-	99	58.030	Taeniopygia_guttata
ENSTNIG00000006216	bms1	93	85.489	ENSTRUG00000008028	bms1	99	85.489	Takifugu_rubripes
ENSTNIG00000006216	bms1	61	68.041	ENSTBEG00000001673	-	64	67.000	Tupaia_belangeri
ENSTNIG00000006216	bms1	89	65.858	ENSTTRG00000007983	BMS1	99	58.243	Tursiops_truncatus
ENSTNIG00000006216	bms1	83	70.709	ENSUAMG00000023996	BMS1	99	59.115	Ursus_americanus
ENSTNIG00000006216	bms1	84	70.709	ENSUMAG00000016523	BMS1	99	58.783	Ursus_maritimus
ENSTNIG00000006216	bms1	72	70.000	ENSVPAG00000007477	BMS1	99	54.397	Vicugna_pacos
ENSTNIG00000006216	bms1	88	65.802	ENSVVUG00000021305	BMS1	99	59.489	Vulpes_vulpes
ENSTNIG00000006216	bms1	86	65.882	ENSXETG00000008158	bms1	94	65.865	Xenopus_tropicalis
ENSTNIG00000006216	bms1	88	74.549	ENSXCOG00000000506	bms1	97	83.659	Xiphophorus_couchianus
ENSTNIG00000006216	bms1	87	74.716	ENSXMAG00000014236	bms1	98	74.194	Xiphophorus_maculatus