EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000006401 (Gene tree)
Gene ID: -
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1228 bases
Position: chrUn_random:30629952-30631179
Accession: ZDB-GENE-050522-505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000009168	UPF0086	PF01868.16	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000009339	-	609	-	ENSTNIP00000009168	202 (aa)	-	H3CLN9

Gene Model

Click here to download ENSTNIG00000006401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000006401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000006401	pop4	100	59.113	ENSG00000105171	POP4	100	70.833	Homo_sapiens
ENSTNIG00000006401	pop4	97	56.061	ENSAMEG00000003172	-	88	56.566	Ailuropoda_melanoleuca
ENSTNIG00000006401	pop4	97	60.204	ENSAMEG00000018329	-	89	61.735	Ailuropoda_melanoleuca
ENSTNIG00000006401	pop4	100	71.921	ENSACIG00000008358	pop4	96	71.429	Amphilophus_citrinellus
ENSTNIG00000006401	pop4	99	74.627	ENSAOCG00000010116	pop4	98	74.627	Amphiprion_ocellaris
ENSTNIG00000006401	pop4	100	74.020	ENSAPEG00000002829	pop4	86	74.020	Amphiprion_percula
ENSTNIG00000006401	pop4	100	75.490	ENSATEG00000013028	pop4	92	75.490	Anabas_testudineus
ENSTNIG00000006401	pop4	100	59.606	ENSAPLG00000014051	POP4	98	59.606	Anas_platyrhynchos
ENSTNIG00000006401	pop4	100	60.099	ENSANAG00000020295	POP4	92	61.576	Aotus_nancymaae
ENSTNIG00000006401	pop4	100	70.443	ENSACLG00000000526	pop4	91	70.443	Astatotilapia_calliptera
ENSTNIG00000006401	pop4	100	68.473	ENSAMXG00000002899	pop4	92	68.473	Astyanax_mexicanus
ENSTNIG00000006401	pop4	100	61.951	ENSBTAG00000002223	POP4	92	61.951	Bos_taurus
ENSTNIG00000006401	pop4	100	61.576	ENSCJAG00000046750	POP4	96	66.474	Callithrix_jacchus
ENSTNIG00000006401	pop4	85	64.162	ENSCAFG00000007630	POP4	95	65.714	Canis_familiaris
ENSTNIG00000006401	pop4	100	60.591	ENSCHIG00000016743	POP4	92	61.951	Capra_hircus
ENSTNIG00000006401	pop4	100	61.576	ENSTSYG00000003488	POP4	92	61.576	Carlito_syrichta
ENSTNIG00000006401	pop4	96	43.077	ENSCAPG00000011105	POP4	86	44.615	Cavia_aperea
ENSTNIG00000006401	pop4	96	60.000	ENSCPOG00000002992	POP4	88	61.538	Cavia_porcellus
ENSTNIG00000006401	pop4	100	60.591	ENSCCAG00000020285	-	92	60.488	Cebus_capucinus
ENSTNIG00000006401	pop4	97	53.061	ENSCCAG00000034244	-	89	53.333	Cebus_capucinus
ENSTNIG00000006401	pop4	100	60.784	ENSCATG00000036022	POP4	100	71.875	Cercocebus_atys
ENSTNIG00000006401	pop4	100	59.113	ENSCLAG00000013162	POP4	92	59.113	Chinchilla_lanigera
ENSTNIG00000006401	pop4	100	59.606	ENSCSAG00000004868	POP4	93	61.084	Chlorocebus_sabaeus
ENSTNIG00000006401	pop4	100	44.335	ENSCHOG00000002071	POP4	93	45.366	Choloepus_hoffmanni
ENSTNIG00000006401	pop4	100	59.113	ENSCPBG00000016132	POP4	92	59.113	Chrysemys_picta_bellii
ENSTNIG00000006401	pop4	60	36.585	ENSCING00000023871	-	62	36.585	Ciona_intestinalis
ENSTNIG00000006401	pop4	97	61.224	ENSCANG00000005924	POP4	97	62.755	Colobus_angolensis_palliatus
ENSTNIG00000006401	pop4	100	61.765	ENSCGRG00001017185	Pop4	92	61.765	Cricetulus_griseus_chok1gshd
ENSTNIG00000006401	pop4	100	61.765	ENSCGRG00000008155	Pop4	92	61.765	Cricetulus_griseus_crigri
ENSTNIG00000006401	pop4	100	69.458	ENSCSEG00000002946	pop4	92	69.458	Cynoglossus_semilaevis
ENSTNIG00000006401	pop4	100	51.961	ENSCVAG00000018602	POP4	87	51.961	Cyprinodon_variegatus
ENSTNIG00000006401	pop4	100	67.488	ENSDARG00000101472	pop4	92	67.488	Danio_rerio
ENSTNIG00000006401	pop4	100	61.576	ENSDNOG00000047663	POP4	78	64.141	Dasypus_novemcinctus
ENSTNIG00000006401	pop4	78	55.696	ENSDORG00000008577	Pop4	87	59.211	Dipodomys_ordii
ENSTNIG00000006401	pop4	78	32.143	FBgn0035831	CG8038	71	32.653	Drosophila_melanogaster
ENSTNIG00000006401	pop4	97	50.000	ENSETEG00000003607	POP4	90	50.505	Echinops_telfairi
ENSTNIG00000006401	pop4	100	42.029	ENSEBUG00000008575	pop4	65	50.345	Eptatretus_burgeri
ENSTNIG00000006401	pop4	75	49.342	ENSEBUG00000004305	pop4	61	50.345	Eptatretus_burgeri
ENSTNIG00000006401	pop4	75	53.947	ENSEBUG00000010447	pop4	56	55.172	Eptatretus_burgeri
ENSTNIG00000006401	pop4	100	67.308	ENSECAG00000020206	POP4	76	67.308	Equus_caballus
ENSTNIG00000006401	pop4	97	45.918	ENSEEUG00000013109	POP4	98	46.970	Erinaceus_europaeus
ENSTNIG00000006401	pop4	99	67.662	ENSELUG00000019812	pop4	91	67.662	Esox_lucius
ENSTNIG00000006401	pop4	97	63.776	ENSFCAG00000001619	POP4	89	63.776	Felis_catus
ENSTNIG00000006401	pop4	100	59.113	ENSFALG00000000206	POP4	90	59.113	Ficedula_albicollis
ENSTNIG00000006401	pop4	100	60.591	ENSFDAG00000017859	POP4	92	61.463	Fukomys_damarensis
ENSTNIG00000006401	pop4	94	65.104	ENSFHEG00000012745	pop4	87	65.104	Fundulus_heteroclitus
ENSTNIG00000006401	pop4	100	63.902	ENSGMOG00000000335	pop4	100	62.439	Gadus_morhua
ENSTNIG00000006401	pop4	100	59.606	ENSGALG00000041972	POP4	85	59.606	Gallus_gallus
ENSTNIG00000006401	pop4	78	63.804	ENSGAFG00000003571	pop4	88	62.500	Gambusia_affinis
ENSTNIG00000006401	pop4	100	73.039	ENSGACG00000014510	pop4	97	78.652	Gasterosteus_aculeatus
ENSTNIG00000006401	pop4	100	60.099	ENSGAGG00000024544	POP4	73	61.463	Gopherus_agassizii
ENSTNIG00000006401	pop4	100	59.113	ENSGGOG00000038346	POP4	92	60.591	Gorilla_gorilla
ENSTNIG00000006401	pop4	100	69.951	ENSHBUG00000021821	pop4	91	69.951	Haplochromis_burtoni
ENSTNIG00000006401	pop4	100	60.099	ENSHGLG00000015798	POP4	92	60.976	Heterocephalus_glaber_female
ENSTNIG00000006401	pop4	100	60.099	ENSHGLG00100009737	POP4	92	60.976	Heterocephalus_glaber_male
ENSTNIG00000006401	pop4	100	70.936	ENSHCOG00000020937	pop4	91	70.936	Hippocampus_comes
ENSTNIG00000006401	pop4	100	66.502	ENSIPUG00000013652	pop4	92	66.502	Ictalurus_punctatus
ENSTNIG00000006401	pop4	100	62.562	ENSSTOG00000011016	POP4	92	63.415	Ictidomys_tridecemlineatus
ENSTNIG00000006401	pop4	100	61.576	ENSJJAG00000013376	Pop4	92	61.576	Jaculus_jaculus
ENSTNIG00000006401	pop4	100	75.490	ENSKMAG00000012250	pop4	91	75.490	Kryptolebias_marmoratus
ENSTNIG00000006401	pop4	100	66.176	ENSLBEG00000018846	-	91	66.176	Labrus_bergylta
ENSTNIG00000006401	pop4	100	66.176	ENSLBEG00000014139	pop4	91	66.176	Labrus_bergylta
ENSTNIG00000006401	pop4	100	57.635	ENSLACG00000008581	POP4	91	57.635	Latimeria_chalumnae
ENSTNIG00000006401	pop4	100	66.010	ENSLOCG00000005597	pop4	92	66.010	Lepisosteus_oculatus
ENSTNIG00000006401	pop4	100	59.606	ENSLAFG00000000084	POP4	92	61.084	Loxodonta_africana
ENSTNIG00000006401	pop4	100	59.606	ENSMFAG00000029606	POP4	92	61.084	Macaca_fascicularis
ENSTNIG00000006401	pop4	100	61.084	ENSMMUG00000017424	POP4	92	61.084	Macaca_mulatta
ENSTNIG00000006401	pop4	100	61.084	ENSMNEG00000031374	POP4	92	61.084	Macaca_nemestrina
ENSTNIG00000006401	pop4	100	60.591	ENSMLEG00000043454	POP4	92	60.294	Mandrillus_leucophaeus
ENSTNIG00000006401	pop4	100	75.000	ENSMAMG00000011716	pop4	91	75.000	Mastacembelus_armatus
ENSTNIG00000006401	pop4	100	70.443	ENSMZEG00005002360	pop4	91	70.443	Maylandia_zebra
ENSTNIG00000006401	pop4	100	60.591	ENSMGAG00000005337	POP4	90	60.591	Meleagris_gallopavo
ENSTNIG00000006401	pop4	100	61.084	ENSMAUG00000020110	Pop4	92	61.084	Mesocricetus_auratus
ENSTNIG00000006401	pop4	100	56.650	ENSMICG00000035730	POP4	91	57.353	Microcebus_murinus
ENSTNIG00000006401	pop4	100	76.355	ENSMMOG00000015321	pop4	91	76.355	Mola_mola
ENSTNIG00000006401	pop4	100	60.591	ENSMODG00000029406	POP4	87	60.591	Monodelphis_domestica
ENSTNIG00000006401	pop4	100	76.355	ENSMALG00000012571	pop4	91	76.355	Monopterus_albus
ENSTNIG00000006401	pop4	100	59.606	MGP_CAROLIEiJ_G0029600	Pop4	92	60.680	Mus_caroli
ENSTNIG00000006401	pop4	100	59.709	ENSMUSG00000030423	Pop4	92	59.709	Mus_musculus
ENSTNIG00000006401	pop4	100	61.275	MGP_SPRETEiJ_G0030699	Pop4	92	61.275	Mus_spretus
ENSTNIG00000006401	pop4	97	62.245	ENSMPUG00000008041	-	89	62.245	Mustela_putorius_furo
ENSTNIG00000006401	pop4	97	53.807	ENSMPUG00000008063	-	89	52.284	Mustela_putorius_furo
ENSTNIG00000006401	pop4	100	47.291	ENSMLUG00000010774	POP4	92	47.291	Myotis_lucifugus
ENSTNIG00000006401	pop4	61	64.800	ENSMEUG00000003636	-	100	64.800	Notamacropus_eugenii
ENSTNIG00000006401	pop4	97	61.735	ENSOPRG00000004736	POP4	98	62.245	Ochotona_princeps
ENSTNIG00000006401	pop4	100	59.113	ENSODEG00000013025	POP4	95	59.113	Octodon_degus
ENSTNIG00000006401	pop4	100	70.443	ENSONIG00000003458	pop4	90	70.443	Oreochromis_niloticus
ENSTNIG00000006401	pop4	100	60.099	ENSOCUG00000015974	POP4	89	63.636	Oryctolagus_cuniculus
ENSTNIG00000006401	pop4	100	70.098	ENSORLG00000020317	pop4	92	70.098	Oryzias_latipes
ENSTNIG00000006401	pop4	100	69.118	ENSORLG00015011624	pop4	91	69.118	Oryzias_latipes_hsok
ENSTNIG00000006401	pop4	100	66.667	ENSOMEG00000002538	pop4	91	66.667	Oryzias_melastigma
ENSTNIG00000006401	pop4	100	60.591	ENSOGAG00000011168	POP4	92	61.275	Otolemur_garnettii
ENSTNIG00000006401	pop4	99	60.891	ENSOARG00000004041	POP4	88	63.636	Ovis_aries
ENSTNIG00000006401	pop4	100	59.113	ENSPPAG00000040372	POP4	92	60.591	Pan_paniscus
ENSTNIG00000006401	pop4	97	63.776	ENSPPRG00000010502	POP4	89	63.776	Panthera_pardus
ENSTNIG00000006401	pop4	97	63.776	ENSPTIG00000016598	POP4	89	63.776	Panthera_tigris_altaica
ENSTNIG00000006401	pop4	100	59.113	ENSPTRG00000010779	POP4	92	60.591	Pan_troglodytes
ENSTNIG00000006401	pop4	100	59.606	ENSPANG00000008546	POP4	92	61.084	Papio_anubis
ENSTNIG00000006401	pop4	99	62.562	ENSPKIG00000004468	pop4	89	63.054	Paramormyrops_kingsleyae
ENSTNIG00000006401	pop4	100	60.099	ENSPSIG00000015690	POP4	100	59.606	Pelodiscus_sinensis
ENSTNIG00000006401	pop4	99	60.784	ENSPMGG00000008608	pop4	98	60.784	Periophthalmus_magnuspinnatus
ENSTNIG00000006401	pop4	100	50.739	ENSPEMG00000019982	-	92	50.739	Peromyscus_maniculatus_bairdii
ENSTNIG00000006401	pop4	100	58.128	ENSPEMG00000014034	-	93	59.901	Peromyscus_maniculatus_bairdii
ENSTNIG00000006401	pop4	71	60.000	ENSPMAG00000006265	pop4	73	60.000	Petromyzon_marinus
ENSTNIG00000006401	pop4	100	60.099	ENSPCIG00000024738	POP4	87	58.621	Phascolarctos_cinereus
ENSTNIG00000006401	pop4	97	67.857	ENSPFOG00000000925	pop4	88	67.857	Poecilia_formosa
ENSTNIG00000006401	pop4	100	65.517	ENSPLAG00000003161	pop4	88	67.857	Poecilia_latipinna
ENSTNIG00000006401	pop4	97	67.857	ENSPMEG00000002475	pop4	88	67.857	Poecilia_mexicana
ENSTNIG00000006401	pop4	94	70.157	ENSPREG00000022403	pop4	83	70.157	Poecilia_reticulata
ENSTNIG00000006401	pop4	100	59.606	ENSPPYG00000009805	POP4	92	61.084	Pongo_abelii
ENSTNIG00000006401	pop4	97	58.376	ENSPCAG00000007737	POP4	89	58.000	Procavia_capensis
ENSTNIG00000006401	pop4	100	60.099	ENSPCOG00000018055	POP4	92	60.488	Propithecus_coquereli
ENSTNIG00000006401	pop4	100	60.976	ENSPVAG00000006069	POP4	92	60.976	Pteropus_vampyrus
ENSTNIG00000006401	pop4	100	70.443	ENSPNYG00000020038	pop4	91	70.443	Pundamilia_nyererei
ENSTNIG00000006401	pop4	96	68.718	ENSPNAG00000005591	pop4	88	68.718	Pygocentrus_nattereri
ENSTNIG00000006401	pop4	100	60.099	ENSRNOG00000027646	Pop4	92	61.165	Rattus_norvegicus
ENSTNIG00000006401	pop4	79	54.375	ENSRBIG00000044769	POP4	83	63.077	Rhinopithecus_bieti
ENSTNIG00000006401	pop4	100	59.606	ENSRROG00000028903	POP4	92	61.084	Rhinopithecus_roxellana
ENSTNIG00000006401	pop4	62	33.813	YBR257W	-	50	33.813	Saccharomyces_cerevisiae
ENSTNIG00000006401	pop4	100	61.084	ENSSBOG00000032445	POP4	92	61.084	Saimiri_boliviensis_boliviensis
ENSTNIG00000006401	pop4	100	58.621	ENSSHAG00000016888	POP4	92	57.143	Sarcophilus_harrisii
ENSTNIG00000006401	pop4	100	64.039	ENSSFOG00015014556	pop4	90	62.562	Scleropages_formosus
ENSTNIG00000006401	pop4	100	75.490	ENSSMAG00000016611	pop4	95	75.862	Scophthalmus_maximus
ENSTNIG00000006401	pop4	100	75.490	ENSSDUG00000019865	pop4	82	75.490	Seriola_dumerili
ENSTNIG00000006401	pop4	100	75.000	ENSSLDG00000001763	pop4	91	75.000	Seriola_lalandi_dorsalis
ENSTNIG00000006401	pop4	96	63.077	ENSSARG00000004748	POP4	90	64.646	Sorex_araneus
ENSTNIG00000006401	pop4	100	75.000	ENSSPAG00000014364	pop4	91	75.000	Stegastes_partitus
ENSTNIG00000006401	pop4	100	62.439	ENSSSCG00000002854	POP4	92	62.562	Sus_scrofa
ENSTNIG00000006401	pop4	99	58.000	ENSTGUG00000008953	POP4	99	58.000	Taeniopygia_guttata
ENSTNIG00000006401	pop4	100	59.606	ENSTBEG00000002194	POP4	92	59.606	Tupaia_belangeri
ENSTNIG00000006401	pop4	100	60.976	ENSTTRG00000005882	POP4	92	60.976	Tursiops_truncatus
ENSTNIG00000006401	pop4	97	62.245	ENSUAMG00000003049	-	89	62.245	Ursus_americanus
ENSTNIG00000006401	pop4	97	62.245	ENSUMAG00000007522	-	89	62.245	Ursus_maritimus
ENSTNIG00000006401	pop4	97	60.714	ENSVVUG00000016876	-	68	62.121	Vulpes_vulpes
ENSTNIG00000006401	pop4	100	57.635	ENSXETG00000017598	pop4	92	56.863	Xenopus_tropicalis
ENSTNIG00000006401	pop4	94	69.388	ENSXCOG00000017695	pop4	83	68.912	Xiphophorus_couchianus
ENSTNIG00000006401	pop4	94	69.388	ENSXMAG00000013862	pop4	83	68.912	Xiphophorus_maculatus