EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000006743 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1232 bases
Position: chrUn_random:14481208-14482439
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000009527	Endonuclease_5	PF04493.14	8.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000009702	-	528	-	ENSTNIP00000009527	176 (aa)	-	H3CMP6

Gene Model

Click here to download ENSTNIG00000006743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000006743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000006743	-	100	90.341	ENSTNIG00000006611	-	71	90.341
ENSTNIG00000006743	-	91	96.894	ENSTNIG00000006755	ENDOV	93	96.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000006743	-	88	63.636	ENSG00000173818	ENDOV	100	64.000	Homo_sapiens
ENSTNIG00000006743	-	88	77.922	ENSAPOG00000007037	ENDOV	61	77.922	Acanthochromis_polyacanthus
ENSTNIG00000006743	-	88	60.390	ENSAMEG00000015304	ENDOV	54	60.390	Ailuropoda_melanoleuca
ENSTNIG00000006743	-	97	54.386	ENSACIG00000020171	ENDOV	80	84.146	Amphilophus_citrinellus
ENSTNIG00000006743	-	88	77.922	ENSAOCG00000018770	ENDOV	61	77.922	Amphiprion_ocellaris
ENSTNIG00000006743	-	100	73.864	ENSATEG00000023498	ENDOV	71	73.864	Anabas_testudineus
ENSTNIG00000006743	-	88	64.935	ENSAPLG00000003471	ENDOV	61	64.935	Anas_platyrhynchos
ENSTNIG00000006743	-	88	62.987	ENSACAG00000015645	ENDOV	64	62.987	Anolis_carolinensis
ENSTNIG00000006743	-	88	64.286	ENSANAG00000029466	ENDOV	84	61.798	Aotus_nancymaae
ENSTNIG00000006743	-	100	73.864	ENSACLG00000010335	ENDOV	67	73.864	Astatotilapia_calliptera
ENSTNIG00000006743	-	88	61.039	ENSBTAG00000015339	ENDOV	54	61.039	Bos_taurus
ENSTNIG00000006743	-	88	63.636	ENSCJAG00000003329	ENDOV	85	61.111	Callithrix_jacchus
ENSTNIG00000006743	-	88	63.636	ENSCAFG00000005684	ENDOV	53	63.636	Canis_familiaris
ENSTNIG00000006743	-	88	63.636	ENSCAFG00020008671	ENDOV	53	63.636	Canis_lupus_dingo
ENSTNIG00000006743	-	88	61.039	ENSCHIG00000021238	ENDOV	50	61.039	Capra_hircus
ENSTNIG00000006743	-	88	62.987	ENSTSYG00000005646	ENDOV	87	61.111	Carlito_syrichta
ENSTNIG00000006743	-	88	56.774	ENSCPOG00000005529	ENDOV	58	56.774	Cavia_porcellus
ENSTNIG00000006743	-	88	63.636	ENSCCAG00000035297	ENDOV	85	60.000	Cebus_capucinus
ENSTNIG00000006743	-	88	64.286	ENSCATG00000042834	ENDOV	86	62.222	Cercocebus_atys
ENSTNIG00000006743	-	51	57.778	ENSCLAG00000006305	ENDOV	50	57.778	Chinchilla_lanigera
ENSTNIG00000006743	-	88	64.935	ENSCSAG00000002315	ENDOV	50	64.935	Chlorocebus_sabaeus
ENSTNIG00000006743	-	88	64.935	ENSCPBG00000010525	ENDOV	59	64.935	Chrysemys_picta_bellii
ENSTNIG00000006743	-	55	39.000	ENSCSAVG00000010293	-	53	39.000	Ciona_savignyi
ENSTNIG00000006743	-	88	75.974	ENSCSEG00000015214	ENDOV	62	75.974	Cynoglossus_semilaevis
ENSTNIG00000006743	-	100	68.750	ENSCVAG00000007166	ENDOV	67	68.750	Cyprinodon_variegatus
ENSTNIG00000006743	-	88	61.538	ENSETEG00000014048	ENDOV	55	61.538	Echinops_telfairi
ENSTNIG00000006743	-	88	54.545	ENSEBUG00000011943	ENDOV	61	54.545	Eptatretus_burgeri
ENSTNIG00000006743	-	88	76.623	ENSELUG00000008464	ENDOV	61	76.623	Esox_lucius
ENSTNIG00000006743	-	91	59.627	ENSFCAG00000031769	ENDOV	90	60.000	Felis_catus
ENSTNIG00000006743	-	88	66.234	ENSFALG00000012475	ENDOV	56	66.234	Ficedula_albicollis
ENSTNIG00000006743	-	83	58.108	ENSFDAG00000013275	ENDOV	54	58.108	Fukomys_damarensis
ENSTNIG00000006743	-	88	71.429	ENSGMOG00000017580	ENDOV	66	71.429	Gadus_morhua
ENSTNIG00000006743	-	100	69.886	ENSGAFG00000007756	ENDOV	70	69.886	Gambusia_affinis
ENSTNIG00000006743	-	100	73.864	ENSGACG00000018198	ENDOV	70	73.864	Gasterosteus_aculeatus
ENSTNIG00000006743	-	88	65.161	ENSGAGG00000022130	ENDOV	58	65.161	Gopherus_agassizii
ENSTNIG00000006743	-	88	62.987	ENSGGOG00000010209	ENDOV	55	62.987	Gorilla_gorilla
ENSTNIG00000006743	-	100	73.864	ENSHBUG00000001543	ENDOV	67	73.864	Haplochromis_burtoni
ENSTNIG00000006743	-	51	55.556	ENSHGLG00000004976	ENDOV	50	55.556	Heterocephalus_glaber_female
ENSTNIG00000006743	-	88	70.701	ENSHCOG00000013813	ENDOV	58	70.701	Hippocampus_comes
ENSTNIG00000006743	-	88	66.883	ENSIPUG00000022104	endov	62	66.883	Ictalurus_punctatus
ENSTNIG00000006743	-	51	58.889	ENSJJAG00000014912	-	50	58.889	Jaculus_jaculus
ENSTNIG00000006743	-	88	77.273	ENSKMAG00000011618	ENDOV	54	77.273	Kryptolebias_marmoratus
ENSTNIG00000006743	-	88	79.221	ENSLBEG00000013183	ENDOV	61	79.221	Labrus_bergylta
ENSTNIG00000006743	-	88	64.935	ENSLACG00000016911	ENDOV	61	64.935	Latimeria_chalumnae
ENSTNIG00000006743	-	88	65.584	ENSLOCG00000013414	ENDOV	54	65.584	Lepisosteus_oculatus
ENSTNIG00000006743	-	88	64.935	ENSMFAG00000044601	ENDOV	86	62.222	Macaca_fascicularis
ENSTNIG00000006743	-	88	64.935	ENSMMUG00000001285	ENDOV	86	62.222	Macaca_mulatta
ENSTNIG00000006743	-	88	64.935	ENSMNEG00000020009	ENDOV	86	62.222	Macaca_nemestrina
ENSTNIG00000006743	-	100	71.591	ENSMAMG00000005788	ENDOV	66	71.591	Mastacembelus_armatus
ENSTNIG00000006743	-	100	73.864	ENSMZEG00005011897	ENDOV	70	73.864	Maylandia_zebra
ENSTNIG00000006743	-	88	61.039	ENSMICG00000037907	ENDOV	86	58.889	Microcebus_murinus
ENSTNIG00000006743	-	66	61.207	ENSMOCG00000019008	Endov	51	58.889	Microtus_ochrogaster
ENSTNIG00000006743	-	88	59.091	ENSMODG00000002372	ENDOV	60	59.091	Monodelphis_domestica
ENSTNIG00000006743	-	100	72.159	ENSMALG00000006274	ENDOV	64	72.159	Monopterus_albus
ENSTNIG00000006743	-	88	62.987	MGP_SPRETEiJ_G0018344	Endov	56	62.987	Mus_spretus
ENSTNIG00000006743	-	89	62.179	ENSMPUG00000012082	ENDOV	55	62.179	Mustela_putorius_furo
ENSTNIG00000006743	-	51	58.889	ENSNGAG00000021532	-	50	58.889	Nannospalax_galili
ENSTNIG00000006743	-	88	63.636	ENSNLEG00000015754	ENDOV	86	62.222	Nomascus_leucogenys
ENSTNIG00000006743	-	88	58.442	ENSMEUG00000010606	ENDOV	70	58.442	Notamacropus_eugenii
ENSTNIG00000006743	-	87	60.784	ENSOPRG00000013691	ENDOV	64	60.784	Ochotona_princeps
ENSTNIG00000006743	-	51	57.778	ENSODEG00000009857	-	50	57.778	Octodon_degus
ENSTNIG00000006743	-	100	73.864	ENSONIG00000003328	ENDOV	69	73.864	Oreochromis_niloticus
ENSTNIG00000006743	-	88	62.581	ENSOCUG00000024779	ENDOV	60	62.581	Oryctolagus_cuniculus
ENSTNIG00000006743	-	51	77.778	ENSORLG00015014346	ENDOV	52	77.778	Oryzias_latipes_hsok
ENSTNIG00000006743	-	88	76.129	ENSOMEG00000006436	ENDOV	61	76.129	Oryzias_melastigma
ENSTNIG00000006743	-	88	62.338	ENSOGAG00000027594	ENDOV	55	62.338	Otolemur_garnettii
ENSTNIG00000006743	-	88	61.039	ENSOARG00000000766	ENDOV	51	61.039	Ovis_aries
ENSTNIG00000006743	-	88	62.987	ENSPPAG00000034689	ENDOV	87	62.222	Pan_paniscus
ENSTNIG00000006743	-	91	60.248	ENSPPRG00000011602	ENDOV	58	60.248	Panthera_pardus
ENSTNIG00000006743	-	88	63.636	ENSPTRG00000009745	ENDOV	87	62.222	Pan_troglodytes
ENSTNIG00000006743	-	88	64.286	ENSPANG00000019621	ENDOV	86	62.222	Papio_anubis
ENSTNIG00000006743	-	100	64.205	ENSPKIG00000006685	ENDOV	67	64.205	Paramormyrops_kingsleyae
ENSTNIG00000006743	-	88	63.636	ENSPSIG00000007239	ENDOV	54	63.636	Pelodiscus_sinensis
ENSTNIG00000006743	-	100	52.841	ENSPMGG00000010309	ENDOV	85	81.111	Periophthalmus_magnuspinnatus
ENSTNIG00000006743	-	88	59.740	ENSPCIG00000029110	ENDOV	51	59.740	Phascolarctos_cinereus
ENSTNIG00000006743	-	100	71.023	ENSPFOG00000016616	ENDOV	67	71.023	Poecilia_formosa
ENSTNIG00000006743	-	100	71.591	ENSPMEG00000002323	ENDOV	67	71.591	Poecilia_mexicana
ENSTNIG00000006743	-	100	52.841	ENSPREG00000002988	ENDOV	74	79.747	Poecilia_reticulata
ENSTNIG00000006743	-	88	64.286	ENSPPYG00000008721	ENDOV	50	64.286	Pongo_abelii
ENSTNIG00000006743	-	93	59.509	ENSPCAG00000011432	ENDOV	57	59.509	Procavia_capensis
ENSTNIG00000006743	-	91	59.627	ENSPCOG00000027446	ENDOV	57	59.627	Propithecus_coquereli
ENSTNIG00000006743	-	88	74.026	ENSPNAG00000028276	ENDOV	61	74.026	Pygocentrus_nattereri
ENSTNIG00000006743	-	88	62.338	ENSRNOG00000003699	Endov	98	55.000	Rattus_norvegicus
ENSTNIG00000006743	-	88	64.935	ENSRBIG00000042566	ENDOV	86	62.222	Rhinopithecus_bieti
ENSTNIG00000006743	-	88	64.935	ENSRROG00000037314	ENDOV	86	62.222	Rhinopithecus_roxellana
ENSTNIG00000006743	-	88	64.286	ENSSBOG00000020840	ENDOV	85	61.111	Saimiri_boliviensis_boliviensis
ENSTNIG00000006743	-	88	58.442	ENSSHAG00000008416	ENDOV	65	58.442	Sarcophilus_harrisii
ENSTNIG00000006743	-	100	68.750	ENSSFOG00015004419	endov	67	68.750	Scleropages_formosus
ENSTNIG00000006743	-	51	82.222	ENSSMAG00000011539	ENDOV	70	82.222	Scophthalmus_maximus
ENSTNIG00000006743	-	100	73.864	ENSSDUG00000003581	ENDOV	66	73.864	Seriola_dumerili
ENSTNIG00000006743	-	100	73.295	ENSSLDG00000001821	ENDOV	67	73.295	Seriola_lalandi_dorsalis
ENSTNIG00000006743	-	100	69.318	ENSSPAG00000014755	ENDOV	67	69.318	Stegastes_partitus
ENSTNIG00000006743	-	88	68.182	ENSTGUG00000003057	ENDOV	66	68.182	Taeniopygia_guttata
ENSTNIG00000006743	-	71	72.000	ENSTRUG00000004474	ENDOV	65	63.636	Takifugu_rubripes
ENSTNIG00000006743	-	89	61.538	ENSUMAG00000015201	ENDOV	60	61.538	Ursus_maritimus
ENSTNIG00000006743	-	51	61.111	ENSVVUG00000018497	-	50	61.111	Vulpes_vulpes
ENSTNIG00000006743	-	88	58.442	ENSXETG00000019623	endov	85	58.442	Xenopus_tropicalis
ENSTNIG00000006743	-	100	70.455	ENSXMAG00000017948	ENDOV	94	79.775	Xiphophorus_maculatus