EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000006892 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4819 bases
Position: chr19:6667130-6671948
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000003080	RRM_1	PF00076.22	1.1e-05	1	1
ENSTNIP00000009689	RRM_1	PF00076.22	1.2e-05	1	1
ENSTNIP00000001813	RRM_1	PF00076.22	1.2e-05	1	1
ENSTNIP00000003080	G-patch	PF01585.23	5.5e-13	1	1
ENSTNIP00000009689	G-patch	PF01585.23	5.6e-13	1	1
ENSTNIP00000001813	G-patch	PF01585.23	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000009865	-	1520	-	ENSTNIP00000009689	420 (aa)	-	Q4SSV3
ENSTNIT00000002078	-	1529	-	ENSTNIP00000001813	423 (aa)	-	H3C0P7
ENSTNIT00000004127	-	1478	-	ENSTNIP00000003080	406 (aa)	-	H3C4B1

Gene Model

Click here to download ENSTNIG00000006892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000006892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000006892	rbm17	100	82.396	ENSG00000134453	RBM17	100	82.396	Homo_sapiens
ENSTNIG00000006892	rbm17	99	91.294	ENSAPOG00000007101	rbm17	99	91.294	Acanthochromis_polyacanthus
ENSTNIG00000006892	rbm17	100	82.641	ENSAMEG00000002107	RBM17	100	82.641	Ailuropoda_melanoleuca
ENSTNIG00000006892	rbm17	100	88.698	ENSACIG00000006251	rbm17	100	88.698	Amphilophus_citrinellus
ENSTNIG00000006892	rbm17	100	91.133	ENSAOCG00000014892	rbm17	100	91.133	Amphiprion_ocellaris
ENSTNIG00000006892	rbm17	100	91.133	ENSAPEG00000022779	rbm17	100	91.133	Amphiprion_percula
ENSTNIG00000006892	rbm17	100	89.549	ENSATEG00000004406	rbm17	100	89.549	Anabas_testudineus
ENSTNIG00000006892	rbm17	100	82.683	ENSAPLG00000004190	RBM17	100	82.683	Anas_platyrhynchos
ENSTNIG00000006892	rbm17	89	79.255	ENSACAG00000005418	RBM17	99	79.255	Anolis_carolinensis
ENSTNIG00000006892	rbm17	100	82.885	ENSANAG00000030127	RBM17	100	82.885	Aotus_nancymaae
ENSTNIG00000006892	rbm17	100	70.388	ENSANAG00000019330	-	93	85.965	Aotus_nancymaae
ENSTNIG00000006892	rbm17	100	87.438	ENSACLG00000003928	rbm17	100	87.438	Astatotilapia_calliptera
ENSTNIG00000006892	rbm17	100	82.506	ENSAMXG00000005853	rbm17	100	82.742	Astyanax_mexicanus
ENSTNIG00000006892	rbm17	100	81.418	ENSBTAG00000011094	-	100	81.418	Bos_taurus
ENSTNIG00000006892	rbm17	100	82.641	ENSBTAG00000021951	RBM17	100	82.641	Bos_taurus
ENSTNIG00000006892	rbm17	85	32.055	WBGene00010233	F58B3.7	97	32.452	Caenorhabditis_elegans
ENSTNIG00000006892	rbm17	100	82.885	ENSCJAG00000020573	RBM17	100	82.885	Callithrix_jacchus
ENSTNIG00000006892	rbm17	100	82.641	ENSCAFG00000005206	RBM17	100	82.641	Canis_familiaris
ENSTNIG00000006892	rbm17	100	77.641	ENSCAFG00020005420	RBM17	100	79.607	Canis_lupus_dingo
ENSTNIG00000006892	rbm17	100	80.440	ENSCHIG00000019921	-	100	80.440	Capra_hircus
ENSTNIG00000006892	rbm17	100	82.641	ENSCHIG00000023204	-	100	82.641	Capra_hircus
ENSTNIG00000006892	rbm17	100	82.927	ENSTSYG00000001165	RBM17	98	88.889	Carlito_syrichta
ENSTNIG00000006892	rbm17	96	63.104	ENSCAPG00000006275	RBM17	100	69.272	Cavia_aperea
ENSTNIG00000006892	rbm17	100	78.973	ENSCPOG00000005679	RBM17	100	80.535	Cavia_porcellus
ENSTNIG00000006892	rbm17	100	82.885	ENSCCAG00000018655	RBM17	100	82.885	Cebus_capucinus
ENSTNIG00000006892	rbm17	100	82.396	ENSCATG00000041566	RBM17	97	87.500	Cercocebus_atys
ENSTNIG00000006892	rbm17	100	82.927	ENSCLAG00000012195	RBM17	99	82.927	Chinchilla_lanigera
ENSTNIG00000006892	rbm17	100	82.396	ENSCSAG00000013564	RBM17	100	82.396	Chlorocebus_sabaeus
ENSTNIG00000006892	rbm17	92	64.815	ENSCHOG00000005131	RBM17	100	64.815	Choloepus_hoffmanni
ENSTNIG00000006892	rbm17	100	81.663	ENSCPBG00000019836	RBM17	100	81.663	Chrysemys_picta_bellii
ENSTNIG00000006892	rbm17	100	46.489	ENSCSAVG00000008782	-	100	46.489	Ciona_savignyi
ENSTNIG00000006892	rbm17	98	73.485	ENSCANG00000023715	-	99	73.804	Colobus_angolensis_palliatus
ENSTNIG00000006892	rbm17	100	82.152	ENSCANG00000030987	RBM17	97	87.500	Colobus_angolensis_palliatus
ENSTNIG00000006892	rbm17	100	65.848	ENSCGRG00001009256	-	100	65.111	Cricetulus_griseus_chok1gshd
ENSTNIG00000006892	rbm17	100	83.415	ENSCGRG00001013842	Rbm17	100	83.415	Cricetulus_griseus_chok1gshd
ENSTNIG00000006892	rbm17	100	83.415	ENSCGRG00000006907	Rbm17	100	83.415	Cricetulus_griseus_crigri
ENSTNIG00000006892	rbm17	100	85.995	ENSCSEG00000018164	rbm17	100	85.995	Cynoglossus_semilaevis
ENSTNIG00000006892	rbm17	100	82.020	ENSCVAG00000002476	rbm17	100	83.498	Cyprinodon_variegatus
ENSTNIG00000006892	rbm17	100	77.934	ENSDARG00000031346	rbm17	100	80.986	Danio_rerio
ENSTNIG00000006892	rbm17	100	82.396	ENSDNOG00000035920	RBM17	100	82.396	Dasypus_novemcinctus
ENSTNIG00000006892	rbm17	99	36.853	FBgn0086683	Spf45	99	35.870	Drosophila_melanogaster
ENSTNIG00000006892	rbm17	86	82.870	ENSETEG00000006642	RBM17	87	82.870	Echinops_telfairi
ENSTNIG00000006892	rbm17	62	69.048	ENSEBUG00000010253	rbm17	82	69.048	Eptatretus_burgeri
ENSTNIG00000006892	rbm17	92	80.159	ENSEASG00005009236	-	100	80.159	Equus_asinus_asinus
ENSTNIG00000006892	rbm17	100	77.262	ENSEASG00005019205	-	100	79.218	Equus_asinus_asinus
ENSTNIG00000006892	rbm17	100	69.951	ENSECAG00000008939	RBM17	100	72.482	Equus_caballus
ENSTNIG00000006892	rbm17	100	73.350	ENSECAG00000001379	-	100	73.350	Equus_caballus
ENSTNIG00000006892	rbm17	86	66.193	ENSEEUG00000013077	RBM17	84	74.570	Erinaceus_europaeus
ENSTNIG00000006892	rbm17	100	83.256	ENSELUG00000006440	rbm17	100	83.256	Esox_lucius
ENSTNIG00000006892	rbm17	100	82.641	ENSFCAG00000031988	RBM17	100	82.641	Felis_catus
ENSTNIG00000006892	rbm17	100	81.907	ENSFALG00000001790	RBM17	100	81.907	Ficedula_albicollis
ENSTNIG00000006892	rbm17	100	82.927	ENSFDAG00000007470	RBM17	100	82.927	Fukomys_damarensis
ENSTNIG00000006892	rbm17	100	88.599	ENSFHEG00000001266	rbm17	100	87.150	Fundulus_heteroclitus
ENSTNIG00000006892	rbm17	99	81.818	ENSGMOG00000008438	rbm17	100	81.818	Gadus_morhua
ENSTNIG00000006892	rbm17	100	82.396	ENSGALG00000006332	RBM17	100	82.683	Gallus_gallus
ENSTNIG00000006892	rbm17	100	88.424	ENSGAFG00000019879	rbm17	100	88.424	Gambusia_affinis
ENSTNIG00000006892	rbm17	99	88.642	ENSGACG00000019174	rbm17	99	88.642	Gasterosteus_aculeatus
ENSTNIG00000006892	rbm17	100	81.663	ENSGAGG00000019906	RBM17	100	81.663	Gopherus_agassizii
ENSTNIG00000006892	rbm17	100	91.133	ENSHBUG00000016624	rbm17	100	91.133	Haplochromis_burtoni
ENSTNIG00000006892	rbm17	100	82.927	ENSHGLG00000011580	RBM17	100	82.927	Heterocephalus_glaber_female
ENSTNIG00000006892	rbm17	100	68.059	ENSHGLG00100010556	-	100	67.076	Heterocephalus_glaber_male
ENSTNIG00000006892	rbm17	100	82.927	ENSHGLG00100010460	RBM17	100	82.927	Heterocephalus_glaber_male
ENSTNIG00000006892	rbm17	99	86.364	ENSHCOG00000010865	rbm17	100	86.364	Hippocampus_comes
ENSTNIG00000006892	rbm17	100	79.512	ENSIPUG00000007699	Rbm17	100	82.824	Ictalurus_punctatus
ENSTNIG00000006892	rbm17	100	83.171	ENSSTOG00000013591	RBM17	100	83.171	Ictidomys_tridecemlineatus
ENSTNIG00000006892	rbm17	100	83.415	ENSJJAG00000022886	Rbm17	100	83.415	Jaculus_jaculus
ENSTNIG00000006892	rbm17	100	61.707	ENSJJAG00000000993	-	100	57.767	Jaculus_jaculus
ENSTNIG00000006892	rbm17	100	87.411	ENSKMAG00000021400	rbm17	100	87.886	Kryptolebias_marmoratus
ENSTNIG00000006892	rbm17	100	90.640	ENSLBEG00000000881	rbm17	100	89.549	Labrus_bergylta
ENSTNIG00000006892	rbm17	99	66.042	ENSLACG00000017297	RBM17	99	65.728	Latimeria_chalumnae
ENSTNIG00000006892	rbm17	100	83.415	ENSLOCG00000015659	rbm17	100	83.415	Lepisosteus_oculatus
ENSTNIG00000006892	rbm17	100	81.796	ENSLAFG00000011629	RBM17	100	81.796	Loxodonta_africana
ENSTNIG00000006892	rbm17	100	82.396	ENSMFAG00000035521	RBM17	97	87.500	Macaca_fascicularis
ENSTNIG00000006892	rbm17	100	82.396	ENSMMUG00000015152	RBM17	97	87.500	Macaca_mulatta
ENSTNIG00000006892	rbm17	100	82.396	ENSMNEG00000017264	RBM17	97	87.500	Macaca_nemestrina
ENSTNIG00000006892	rbm17	100	82.396	ENSMLEG00000029340	RBM17	97	87.500	Mandrillus_leucophaeus
ENSTNIG00000006892	rbm17	100	88.599	ENSMAMG00000000387	rbm17	100	88.599	Mastacembelus_armatus
ENSTNIG00000006892	rbm17	100	90.000	ENSMZEG00005015179	rbm17	100	90.000	Maylandia_zebra
ENSTNIG00000006892	rbm17	100	81.598	ENSMGAG00000003981	RBM17	100	81.598	Meleagris_gallopavo
ENSTNIG00000006892	rbm17	100	83.415	ENSMAUG00000019247	Rbm17	100	83.415	Mesocricetus_auratus
ENSTNIG00000006892	rbm17	100	77.053	ENSMICG00000041489	-	100	77.053	Microcebus_murinus
ENSTNIG00000006892	rbm17	100	82.927	ENSMICG00000003976	-	100	82.927	Microcebus_murinus
ENSTNIG00000006892	rbm17	100	83.415	ENSMOCG00000011847	Rbm17	100	83.415	Microtus_ochrogaster
ENSTNIG00000006892	rbm17	93	66.316	ENSMOCG00000014517	-	99	67.105	Microtus_ochrogaster
ENSTNIG00000006892	rbm17	100	82.238	ENSMMOG00000010264	rbm17	100	82.238	Mola_mola
ENSTNIG00000006892	rbm17	100	81.663	ENSMODG00000016648	RBM17	100	81.663	Monodelphis_domestica
ENSTNIG00000006892	rbm17	100	87.915	ENSMALG00000010597	rbm17	100	88.863	Monopterus_albus
ENSTNIG00000006892	rbm17	100	83.659	MGP_CAROLIEiJ_G0023173	Rbm17	100	83.659	Mus_caroli
ENSTNIG00000006892	rbm17	100	83.659	ENSMUSG00000037197	Rbm17	100	83.659	Mus_musculus
ENSTNIG00000006892	rbm17	100	83.659	MGP_PahariEiJ_G0019233	Rbm17	100	83.659	Mus_pahari
ENSTNIG00000006892	rbm17	100	83.659	MGP_SPRETEiJ_G0024091	Rbm17	100	83.659	Mus_spretus
ENSTNIG00000006892	rbm17	86	80.682	ENSMPUG00000016359	RBM17	96	80.682	Mustela_putorius_furo
ENSTNIG00000006892	rbm17	100	81.752	ENSMLUG00000002302	-	100	81.752	Myotis_lucifugus
ENSTNIG00000006892	rbm17	100	79.075	ENSMLUG00000025709	-	100	79.075	Myotis_lucifugus
ENSTNIG00000006892	rbm17	100	83.415	ENSNGAG00000000741	Rbm17	100	83.415	Nannospalax_galili
ENSTNIG00000006892	rbm17	100	57.561	ENSNGAG00000000663	-	100	57.561	Nannospalax_galili
ENSTNIG00000006892	rbm17	100	84.975	ENSNBRG00000018148	rbm17	100	84.975	Neolamprologus_brichardi
ENSTNIG00000006892	rbm17	100	82.396	ENSNLEG00000033350	RBM17	98	86.066	Nomascus_leucogenys
ENSTNIG00000006892	rbm17	100	76.284	ENSMEUG00000011347	RBM17	100	76.284	Notamacropus_eugenii
ENSTNIG00000006892	rbm17	100	71.638	ENSOPRG00000002993	RBM17	100	71.638	Ochotona_princeps
ENSTNIG00000006892	rbm17	97	63.797	ENSODEG00000007286	-	99	63.797	Octodon_degus
ENSTNIG00000006892	rbm17	100	82.725	ENSODEG00000004393	RBM17	100	82.725	Octodon_degus
ENSTNIG00000006892	rbm17	100	90.686	ENSONIG00000011838	rbm17	100	90.686	Oreochromis_niloticus
ENSTNIG00000006892	rbm17	100	81.707	ENSOANG00000015455	RBM17	100	82.195	Ornithorhynchus_anatinus
ENSTNIG00000006892	rbm17	100	89.786	ENSORLG00000028798	rbm17	100	89.786	Oryzias_latipes
ENSTNIG00000006892	rbm17	100	89.786	ENSORLG00020004593	rbm17	98	89.786	Oryzias_latipes_hni
ENSTNIG00000006892	rbm17	100	90.394	ENSORLG00015000033	rbm17	100	90.394	Oryzias_latipes_hsok
ENSTNIG00000006892	rbm17	100	90.024	ENSOMEG00000012060	rbm17	100	90.123	Oryzias_melastigma
ENSTNIG00000006892	rbm17	100	83.171	ENSOGAG00000015687	RBM17	100	83.171	Otolemur_garnettii
ENSTNIG00000006892	rbm17	100	82.641	ENSOARG00000012975	RBM17	100	82.641	Ovis_aries
ENSTNIG00000006892	rbm17	100	82.396	ENSPPAG00000032347	RBM17	98	86.066	Pan_paniscus
ENSTNIG00000006892	rbm17	100	82.641	ENSPPRG00000010706	RBM17	100	82.641	Panthera_pardus
ENSTNIG00000006892	rbm17	100	82.641	ENSPTIG00000007596	RBM17	100	82.641	Panthera_tigris_altaica
ENSTNIG00000006892	rbm17	100	82.396	ENSPTRG00000002265	RBM17	98	86.066	Pan_troglodytes
ENSTNIG00000006892	rbm17	100	82.396	ENSPANG00000023425	RBM17	97	87.500	Papio_anubis
ENSTNIG00000006892	rbm17	100	79.021	ENSPKIG00000005048	-	100	79.487	Paramormyrops_kingsleyae
ENSTNIG00000006892	rbm17	100	81.967	ENSPKIG00000025526	rbm17	100	81.967	Paramormyrops_kingsleyae
ENSTNIG00000006892	rbm17	100	80.583	ENSPSIG00000012332	RBM17	100	80.583	Pelodiscus_sinensis
ENSTNIG00000006892	rbm17	100	86.241	ENSPMGG00000007980	rbm17	100	86.241	Periophthalmus_magnuspinnatus
ENSTNIG00000006892	rbm17	100	83.415	ENSPEMG00000014320	Rbm17	100	83.415	Peromyscus_maniculatus_bairdii
ENSTNIG00000006892	rbm17	100	81.265	ENSPCIG00000019260	-	100	81.265	Phascolarctos_cinereus
ENSTNIG00000006892	rbm17	100	89.311	ENSPFOG00000013271	rbm17	100	89.311	Poecilia_formosa
ENSTNIG00000006892	rbm17	100	89.311	ENSPLAG00000004455	rbm17	100	89.311	Poecilia_latipinna
ENSTNIG00000006892	rbm17	100	89.409	ENSPMEG00000014864	rbm17	100	89.409	Poecilia_mexicana
ENSTNIG00000006892	rbm17	100	88.836	ENSPREG00000015589	rbm17	100	88.836	Poecilia_reticulata
ENSTNIG00000006892	rbm17	81	58.788	ENSPPYG00000019042	-	99	58.282	Pongo_abelii
ENSTNIG00000006892	rbm17	100	82.396	ENSPPYG00000002067	RBM17	100	82.396	Pongo_abelii
ENSTNIG00000006892	rbm17	99	61.425	ENSPPYG00000019881	-	100	61.425	Pongo_abelii
ENSTNIG00000006892	rbm17	100	75.061	ENSPCAG00000016879	RBM17	100	75.061	Procavia_capensis
ENSTNIG00000006892	rbm17	100	83.171	ENSPCOG00000027881	RBM17	100	83.171	Propithecus_coquereli
ENSTNIG00000006892	rbm17	100	74.572	ENSPVAG00000015499	RBM17	100	74.572	Pteropus_vampyrus
ENSTNIG00000006892	rbm17	100	79.064	ENSPNYG00000015274	rbm17	100	80.049	Pundamilia_nyererei
ENSTNIG00000006892	rbm17	100	82.742	ENSPNAG00000030046	rbm17	100	82.979	Pygocentrus_nattereri
ENSTNIG00000006892	rbm17	100	83.415	ENSRNOG00000018767	Rbm17	100	83.415	Rattus_norvegicus
ENSTNIG00000006892	rbm17	100	82.396	ENSRBIG00000043727	RBM17	97	87.500	Rhinopithecus_bieti
ENSTNIG00000006892	rbm17	100	82.396	ENSRROG00000044142	RBM17	97	87.500	Rhinopithecus_roxellana
ENSTNIG00000006892	rbm17	100	74.083	ENSSBOG00000023653	-	100	73.839	Saimiri_boliviensis_boliviensis
ENSTNIG00000006892	rbm17	100	82.641	ENSSBOG00000031661	-	100	82.641	Saimiri_boliviensis_boliviensis
ENSTNIG00000006892	rbm17	100	81.663	ENSSHAG00000012480	-	100	81.663	Sarcophilus_harrisii
ENSTNIG00000006892	rbm17	100	82.968	ENSSFOG00015009892	rbm17	100	83.455	Scleropages_formosus
ENSTNIG00000006892	rbm17	100	85.185	ENSSMAG00000012368	rbm17	100	85.185	Scophthalmus_maximus
ENSTNIG00000006892	rbm17	100	87.112	ENSSDUG00000015015	rbm17	100	88.889	Seriola_dumerili
ENSTNIG00000006892	rbm17	100	87.112	ENSSLDG00000014486	rbm17	100	88.889	Seriola_lalandi_dorsalis
ENSTNIG00000006892	rbm17	50	79.091	ENSSARG00000001792	-	79	84.524	Sorex_araneus
ENSTNIG00000006892	rbm17	99	81.863	ENSSPUG00000001036	RBM17	99	81.863	Sphenodon_punctatus
ENSTNIG00000006892	rbm17	100	91.133	ENSSPAG00000002338	rbm17	100	91.133	Stegastes_partitus
ENSTNIG00000006892	rbm17	100	82.396	ENSSSCG00000011134	RBM17	100	82.396	Sus_scrofa
ENSTNIG00000006892	rbm17	100	81.707	ENSTGUG00000002013	RBM17	100	81.707	Taeniopygia_guttata
ENSTNIG00000006892	rbm17	100	95.567	ENSTRUG00000010698	rbm17	100	95.567	Takifugu_rubripes
ENSTNIG00000006892	rbm17	100	64.128	ENSTBEG00000014686	RBM17	100	65.770	Tupaia_belangeri
ENSTNIG00000006892	rbm17	90	81.793	ENSTTRG00000001344	RBM17	100	81.793	Tursiops_truncatus
ENSTNIG00000006892	rbm17	100	77.641	ENSUAMG00000009499	RBM17	100	80.344	Ursus_americanus
ENSTNIG00000006892	rbm17	100	82.641	ENSUMAG00000012237	RBM17	100	82.641	Ursus_maritimus
ENSTNIG00000006892	rbm17	100	71.149	ENSVPAG00000005497	RBM17	100	71.149	Vicugna_pacos
ENSTNIG00000006892	rbm17	100	77.641	ENSVVUG00000006780	RBM17	100	79.607	Vulpes_vulpes
ENSTNIG00000006892	rbm17	99	79.607	ENSXETG00000018123	rbm17	100	79.607	Xenopus_tropicalis
ENSTNIG00000006892	rbm17	100	89.163	ENSXMAG00000008674	rbm17	100	89.163	Xiphophorus_maculatus