EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000007057 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 13146 bases
Position: chr11:3627919-3641064
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000009857	R3H	PF01424.22	6.7e-11	1	1
ENSTNIP00000002221	R3H	PF01424.22	6.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010035	-	3195	-	ENSTNIP00000009857	1064 (aa)	-	H3CNM5
ENSTNIT00000003236	-	3210	-	ENSTNIP00000002221	1069 (aa)	-	H3C1V4

Gene Model

Click here to download ENSTNIG00000007057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007057	r3hdm2	87	79.023	ENSG00000179912	R3HDM2	90	77.299	Homo_sapiens
ENSTNIG00000007057	r3hdm2	99	84.206	ENSAPOG00000020341	r3hdm2	88	98.045	Acanthochromis_polyacanthus
ENSTNIG00000007057	r3hdm2	55	37.669	ENSAPOG00000021873	-	81	34.039	Acanthochromis_polyacanthus
ENSTNIG00000007057	r3hdm2	90	82.184	ENSAMEG00000004812	R3HDM2	87	82.184	Ailuropoda_melanoleuca
ENSTNIG00000007057	r3hdm2	91	83.555	ENSACIG00000016146	r3hdm2	97	81.639	Amphilophus_citrinellus
ENSTNIG00000007057	r3hdm2	90	98.045	ENSAOCG00000023694	r3hdm2	91	98.045	Amphiprion_ocellaris
ENSTNIG00000007057	r3hdm2	90	93.017	ENSAPEG00000008851	r3hdm2	93	90.196	Amphiprion_percula
ENSTNIG00000007057	r3hdm2	89	92.737	ENSATEG00000025024	r3hdm2	96	90.286	Anabas_testudineus
ENSTNIG00000007057	r3hdm2	87	80.966	ENSAPLG00000004298	R3HDM2	95	61.116	Anas_platyrhynchos
ENSTNIG00000007057	r3hdm2	87	75.921	ENSACAG00000006388	R3HDM2	90	73.654	Anolis_carolinensis
ENSTNIG00000007057	r3hdm2	87	74.499	ENSANAG00000031310	-	92	72.493	Aotus_nancymaae
ENSTNIG00000007057	r3hdm2	87	79.083	ENSANAG00000025397	-	90	78.510	Aotus_nancymaae
ENSTNIG00000007057	r3hdm2	90	97.486	ENSACLG00000019106	r3hdm2	92	96.369	Astatotilapia_calliptera
ENSTNIG00000007057	r3hdm2	86	83.526	ENSAMXG00000017180	r3hdm2	93	83.526	Astyanax_mexicanus
ENSTNIG00000007057	r3hdm2	87	78.448	ENSBTAG00000018361	R3HDM2	90	76.724	Bos_taurus
ENSTNIG00000007057	r3hdm2	88	77.222	ENSCJAG00000007365	R3HDM2	91	76.667	Callithrix_jacchus
ENSTNIG00000007057	r3hdm2	89	77.546	ENSCAFG00000000215	R3HDM2	90	77.299	Canis_familiaris
ENSTNIG00000007057	r3hdm2	88	81.034	ENSCAFG00020023713	R3HDM2	91	78.448	Canis_lupus_dingo
ENSTNIG00000007057	r3hdm2	87	78.448	ENSCHIG00000014022	R3HDM2	88	79.885	Capra_hircus
ENSTNIG00000007057	r3hdm2	87	78.736	ENSTSYG00000001449	R3HDM2	90	78.736	Carlito_syrichta
ENSTNIG00000007057	r3hdm2	89	79.023	ENSCPOG00000009217	R3HDM2	88	82.184	Cavia_porcellus
ENSTNIG00000007057	r3hdm2	75	79.083	ENSCCAG00000026083	R3HDM2	89	77.364	Cebus_capucinus
ENSTNIG00000007057	r3hdm2	87	79.083	ENSCATG00000036929	R3HDM2	90	77.364	Cercocebus_atys
ENSTNIG00000007057	r3hdm2	87	79.310	ENSCLAG00000011997	R3HDM2	87	82.471	Chinchilla_lanigera
ENSTNIG00000007057	r3hdm2	99	62.117	ENSCSAG00000004911	R3HDM2	87	77.364	Chlorocebus_sabaeus
ENSTNIG00000007057	r3hdm2	71	64.496	ENSCHOG00000005636	R3HDM2	73	77.586	Choloepus_hoffmanni
ENSTNIG00000007057	r3hdm2	91	82.081	ENSCPBG00000013922	R3HDM2	91	82.081	Chrysemys_picta_bellii
ENSTNIG00000007057	r3hdm2	87	79.083	ENSCANG00000043807	R3HDM2	88	80.516	Colobus_angolensis_palliatus
ENSTNIG00000007057	r3hdm2	87	76.353	ENSCGRG00001017324	R3hdm2	88	80.057	Cricetulus_griseus_chok1gshd
ENSTNIG00000007057	r3hdm2	99	61.603	ENSCGRG00000003862	R3hdm2	88	80.057	Cricetulus_griseus_crigri
ENSTNIG00000007057	r3hdm2	91	92.954	ENSCSEG00000010925	r3hdm2	92	92.954	Cynoglossus_semilaevis
ENSTNIG00000007057	r3hdm2	90	94.231	ENSCVAG00000009058	r3hdm2	92	94.231	Cyprinodon_variegatus
ENSTNIG00000007057	r3hdm2	88	85.876	ENSDARG00000102610	r3hdm2	96	84.986	Danio_rerio
ENSTNIG00000007057	r3hdm2	99	61.381	ENSDNOG00000015033	R3HDM2	92	82.971	Dasypus_novemcinctus
ENSTNIG00000007057	r3hdm2	87	73.199	ENSDORG00000011462	R3hdm2	94	73.199	Dipodomys_ordii
ENSTNIG00000007057	r3hdm2	89	80.387	ENSEASG00005007091	R3HDM2	88	81.058	Equus_asinus_asinus
ENSTNIG00000007057	r3hdm2	88	77.437	ENSECAG00000003157	R3HDM2	88	80.387	Equus_caballus
ENSTNIG00000007057	r3hdm2	89	93.872	ENSELUG00000015969	r3hdm2	87	91.922	Esox_lucius
ENSTNIG00000007057	r3hdm2	90	82.471	ENSFCAG00000000192	R3HDM2	86	82.471	Felis_catus
ENSTNIG00000007057	r3hdm2	77	77.159	ENSFALG00000000255	R3HDM2	87	76.323	Ficedula_albicollis
ENSTNIG00000007057	r3hdm2	90	82.471	ENSFDAG00000019385	R3HDM2	87	81.897	Fukomys_damarensis
ENSTNIG00000007057	r3hdm2	89	94.505	ENSFHEG00000016484	r3hdm2	88	94.505	Fundulus_heteroclitus
ENSTNIG00000007057	r3hdm2	84	94.134	ENSGMOG00000007961	r3hdm2	92	95.702	Gadus_morhua
ENSTNIG00000007057	r3hdm2	89	76.602	ENSGALG00000043736	R3HDM2	90	70.103	Gallus_gallus
ENSTNIG00000007057	r3hdm2	89	95.330	ENSGAFG00000013887	r3hdm2	88	95.330	Gambusia_affinis
ENSTNIG00000007057	r3hdm2	99	81.262	ENSGACG00000006442	r3hdm2	92	97.443	Gasterosteus_aculeatus
ENSTNIG00000007057	r3hdm2	92	79.501	ENSGAGG00000017797	R3HDM2	92	79.501	Gopherus_agassizii
ENSTNIG00000007057	r3hdm2	87	79.023	ENSGGOG00000015007	R3HDM2	90	77.299	Gorilla_gorilla
ENSTNIG00000007057	r3hdm2	81	73.883	ENSHGLG00000010421	-	90	71.864	Heterocephalus_glaber_female
ENSTNIG00000007057	r3hdm2	90	79.459	ENSHGLG00000010434	-	87	81.897	Heterocephalus_glaber_female
ENSTNIG00000007057	r3hdm2	88	70.811	ENSHGLG00100018871	-	88	72.701	Heterocephalus_glaber_male
ENSTNIG00000007057	r3hdm2	90	79.459	ENSHGLG00100004183	-	87	81.897	Heterocephalus_glaber_male
ENSTNIG00000007057	r3hdm2	92	91.831	ENSHCOG00000001142	r3hdm2	90	91.643	Hippocampus_comes
ENSTNIG00000007057	r3hdm2	89	87.430	ENSIPUG00000023873	r3hdm2	86	84.916	Ictalurus_punctatus
ENSTNIG00000007057	r3hdm2	87	72.126	ENSSTOG00000013424	R3HDM2	89	72.126	Ictidomys_tridecemlineatus
ENSTNIG00000007057	r3hdm2	99	62.991	ENSJJAG00000010001	R3hdm2	87	82.184	Jaculus_jaculus
ENSTNIG00000007057	r3hdm2	90	95.604	ENSKMAG00000012695	r3hdm2	89	95.604	Kryptolebias_marmoratus
ENSTNIG00000007057	r3hdm2	89	95.556	ENSLBEG00000013115	r3hdm2	87	95.330	Labrus_bergylta
ENSTNIG00000007057	r3hdm2	87	84.302	ENSLACG00000019064	r3hdm2	92	83.140	Latimeria_chalumnae
ENSTNIG00000007057	r3hdm2	88	85.794	ENSLOCG00000005976	r3hdm2	92	80.371	Lepisosteus_oculatus
ENSTNIG00000007057	r3hdm2	99	63.178	ENSLAFG00000006510	R3HDM2	87	82.471	Loxodonta_africana
ENSTNIG00000007057	r3hdm2	87	79.083	ENSMFAG00000036385	R3HDM2	87	80.516	Macaca_fascicularis
ENSTNIG00000007057	r3hdm2	87	79.083	ENSMMUG00000021789	R3HDM2	88	82.808	Macaca_mulatta
ENSTNIG00000007057	r3hdm2	87	79.083	ENSMNEG00000025314	R3HDM2	87	80.516	Macaca_nemestrina
ENSTNIG00000007057	r3hdm2	87	79.083	ENSMLEG00000028915	R3HDM2	90	77.364	Mandrillus_leucophaeus
ENSTNIG00000007057	r3hdm2	90	95.604	ENSMAMG00000009793	r3hdm2	91	95.604	Mastacembelus_armatus
ENSTNIG00000007057	r3hdm2	90	97.486	ENSMZEG00005007319	r3hdm2	92	96.369	Maylandia_zebra
ENSTNIG00000007057	r3hdm2	87	79.023	ENSMICG00000012389	R3HDM2	89	77.299	Microcebus_murinus
ENSTNIG00000007057	r3hdm2	90	76.216	ENSMOCG00000014425	R3hdm2	90	74.644	Microtus_ochrogaster
ENSTNIG00000007057	r3hdm2	90	87.258	ENSMMOG00000007448	r3hdm2	96	86.704	Mola_mola
ENSTNIG00000007057	r3hdm2	90	81.174	ENSMALG00000010211	r3hdm2	99	80.223	Monopterus_albus
ENSTNIG00000007057	r3hdm2	89	77.299	MGP_CAROLIEiJ_G0015896	R3hdm2	87	81.034	Mus_caroli
ENSTNIG00000007057	r3hdm2	89	77.586	ENSMUSG00000025404	R3hdm2	87	81.322	Mus_musculus
ENSTNIG00000007057	r3hdm2	90	78.378	MGP_PahariEiJ_G0031189	R3hdm2	88	81.322	Mus_pahari
ENSTNIG00000007057	r3hdm2	89	77.586	MGP_SPRETEiJ_G0016722	R3hdm2	87	81.322	Mus_spretus
ENSTNIG00000007057	r3hdm2	86	81.766	ENSMPUG00000001818	R3HDM2	86	76.154	Mustela_putorius_furo
ENSTNIG00000007057	r3hdm2	91	77.083	ENSMLUG00000004980	R3HDM2	88	81.818	Myotis_lucifugus
ENSTNIG00000007057	r3hdm2	87	78.736	ENSNGAG00000018800	R3hdm2	88	82.471	Nannospalax_galili
ENSTNIG00000007057	r3hdm2	87	83.649	ENSNBRG00000004483	r3hdm2	97	81.240	Neolamprologus_brichardi
ENSTNIG00000007057	r3hdm2	87	79.023	ENSNLEG00000017351	R3HDM2	88	80.460	Nomascus_leucogenys
ENSTNIG00000007057	r3hdm2	87	68.678	ENSMEUG00000008588	R3HDM2	85	68.103	Notamacropus_eugenii
ENSTNIG00000007057	r3hdm2	89	72.701	ENSOPRG00000013670	R3HDM2	90	72.701	Ochotona_princeps
ENSTNIG00000007057	r3hdm2	89	91.413	ENSONIG00000005075	r3hdm2	91	88.089	Oreochromis_niloticus
ENSTNIG00000007057	r3hdm2	99	62.687	ENSOCUG00000013258	R3HDM2	87	81.897	Oryctolagus_cuniculus
ENSTNIG00000007057	r3hdm2	89	95.068	ENSORLG00000005502	r3hdm2	88	95.068	Oryzias_latipes
ENSTNIG00000007057	r3hdm2	89	95.068	ENSORLG00020017069	r3hdm2	91	95.068	Oryzias_latipes_hni
ENSTNIG00000007057	r3hdm2	89	95.068	ENSORLG00015012735	r3hdm2	91	95.068	Oryzias_latipes_hsok
ENSTNIG00000007057	r3hdm2	87	83.430	ENSOMEG00000018079	r3hdm2	89	83.430	Oryzias_melastigma
ENSTNIG00000007057	r3hdm2	99	59.814	ENSOGAG00000012055	R3HDM2	87	73.563	Otolemur_garnettii
ENSTNIG00000007057	r3hdm2	83	72.159	ENSOGAG00000027966	-	88	68.750	Otolemur_garnettii
ENSTNIG00000007057	r3hdm2	87	78.448	ENSOARG00000006929	R3HDM2	90	76.724	Ovis_aries
ENSTNIG00000007057	r3hdm2	87	79.023	ENSPPAG00000034395	R3HDM2	90	77.299	Pan_paniscus
ENSTNIG00000007057	r3hdm2	87	78.736	ENSPPRG00000009240	R3HDM2	90	77.011	Panthera_pardus
ENSTNIG00000007057	r3hdm2	87	78.736	ENSPTIG00000008752	R3HDM2	90	77.011	Panthera_tigris_altaica
ENSTNIG00000007057	r3hdm2	87	79.023	ENSPTRG00000046457	R3HDM2	87	80.460	Pan_troglodytes
ENSTNIG00000007057	r3hdm2	87	79.251	ENSPANG00000024002	R3HDM2	92	77.522	Papio_anubis
ENSTNIG00000007057	r3hdm2	89	88.858	ENSPKIG00000003171	r3hdm2	95	79.609	Paramormyrops_kingsleyae
ENSTNIG00000007057	r3hdm2	88	92.151	ENSPMGG00000007061	r3hdm2	95	89.244	Periophthalmus_magnuspinnatus
ENSTNIG00000007057	r3hdm2	89	79.944	ENSPEMG00000015964	R3hdm2	88	79.109	Peromyscus_maniculatus_bairdii
ENSTNIG00000007057	r3hdm2	87	77.299	ENSPCIG00000023841	R3HDM2	93	72.063	Phascolarctos_cinereus
ENSTNIG00000007057	r3hdm2	100	77.932	ENSPFOG00000006077	r3hdm2	100	78.368	Poecilia_formosa
ENSTNIG00000007057	r3hdm2	90	90.385	ENSPLAG00000002971	r3hdm2	92	87.637	Poecilia_latipinna
ENSTNIG00000007057	r3hdm2	90	90.385	ENSPMEG00000005330	r3hdm2	92	87.637	Poecilia_mexicana
ENSTNIG00000007057	r3hdm2	90	90.385	ENSPREG00000008424	r3hdm2	88	95.330	Poecilia_reticulata
ENSTNIG00000007057	r3hdm2	84	73.851	ENSPPYG00000004685	R3HDM2	72	73.851	Pongo_abelii
ENSTNIG00000007057	r3hdm2	83	81.429	ENSPCAG00000014642	R3HDM2	86	81.429	Procavia_capensis
ENSTNIG00000007057	r3hdm2	87	79.023	ENSPCOG00000013201	R3HDM2	90	78.161	Propithecus_coquereli
ENSTNIG00000007057	r3hdm2	88	81.897	ENSPVAG00000003967	R3HDM2	95	61.811	Pteropus_vampyrus
ENSTNIG00000007057	r3hdm2	88	89.685	ENSPNYG00000013479	r3hdm2	97	87.106	Pundamilia_nyererei
ENSTNIG00000007057	r3hdm2	89	93.855	ENSPNAG00000017473	r3hdm2	88	93.855	Pygocentrus_nattereri
ENSTNIG00000007057	r3hdm2	87	76.437	ENSRNOG00000007801	R3hdm2	87	80.172	Rattus_norvegicus
ENSTNIG00000007057	r3hdm2	87	79.083	ENSRBIG00000037403	R3HDM2	90	77.364	Rhinopithecus_bieti
ENSTNIG00000007057	r3hdm2	87	79.083	ENSRROG00000022271	R3HDM2	88	80.516	Rhinopithecus_roxellana
ENSTNIG00000007057	r3hdm2	87	79.083	ENSSBOG00000023547	R3HDM2	90	77.364	Saimiri_boliviensis_boliviensis
ENSTNIG00000007057	r3hdm2	88	82.184	ENSSHAG00000003511	R3HDM2	87	81.609	Sarcophilus_harrisii
ENSTNIG00000007057	r3hdm2	87	87.069	ENSSFOG00015011219	r3hdm2	95	85.879	Scleropages_formosus
ENSTNIG00000007057	r3hdm2	90	96.610	ENSSMAG00000012073	r3hdm2	90	96.369	Scophthalmus_maximus
ENSTNIG00000007057	r3hdm2	90	92.737	ENSSDUG00000019269	r3hdm2	91	89.944	Seriola_dumerili
ENSTNIG00000007057	r3hdm2	90	97.486	ENSSLDG00000005252	r3hdm2	91	97.486	Seriola_lalandi_dorsalis
ENSTNIG00000007057	r3hdm2	88	58.333	ENSSARG00000003958	R3HDM2	90	56.061	Sorex_araneus
ENSTNIG00000007057	r3hdm2	90	75.138	ENSSPUG00000014132	R3HDM2	92	72.652	Sphenodon_punctatus
ENSTNIG00000007057	r3hdm2	90	93.017	ENSSPAG00000022594	r3hdm2	91	90.223	Stegastes_partitus
ENSTNIG00000007057	r3hdm2	84	82.759	ENSSSCG00000026498	R3HDM2	92	85.652	Sus_scrofa
ENSTNIG00000007057	r3hdm2	62	79.834	ENSTGUG00000015881	R3HDM2	84	79.282	Taeniopygia_guttata
ENSTNIG00000007057	r3hdm2	90	89.037	ENSTRUG00000015075	r3hdm2	96	88.889	Takifugu_rubripes
ENSTNIG00000007057	r3hdm2	69	68.678	ENSTBEG00000015967	R3HDM2	69	68.678	Tupaia_belangeri
ENSTNIG00000007057	r3hdm2	88	81.556	ENSTTRG00000013082	R3HDM2	90	61.905	Tursiops_truncatus
ENSTNIG00000007057	r3hdm2	90	79.023	ENSUAMG00000020913	R3HDM2	90	72.324	Ursus_americanus
ENSTNIG00000007057	r3hdm2	86	80.528	ENSUMAG00000019179	R3HDM2	88	78.548	Ursus_maritimus
ENSTNIG00000007057	r3hdm2	85	82.060	ENSVPAG00000008656	R3HDM2	81	83.333	Vicugna_pacos
ENSTNIG00000007057	r3hdm2	89	77.546	ENSVVUG00000018014	R3HDM2	86	77.546	Vulpes_vulpes
ENSTNIG00000007057	r3hdm2	89	76.602	ENSXETG00000017153	r3hdm2	92	71.625	Xenopus_tropicalis
ENSTNIG00000007057	r3hdm2	82	81.260	ENSXCOG00000013882	r3hdm2	97	80.291	Xiphophorus_couchianus
ENSTNIG00000007057	r3hdm2	90	95.330	ENSXMAG00000017978	r3hdm2	90	95.330	Xiphophorus_maculatus