EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000007354 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 16334 bases
Position: chr11:10850083-10866416
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010160	SHQ1	PF04925.15	7.4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010340	-	1356	-	ENSTNIP00000010160	452 (aa)	-	H3CPH7

Gene Model

Click here to download ENSTNIG00000007354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007354	shq1	90	58.173	ENSG00000144736	SHQ1	96	70.833	Homo_sapiens
ENSTNIG00000007354	shq1	98	72.624	ENSAPOG00000000397	shq1	77	70.000	Acanthochromis_polyacanthus
ENSTNIG00000007354	shq1	98	56.044	ENSAMEG00000015140	SHQ1	71	57.178	Ailuropoda_melanoleuca
ENSTNIG00000007354	shq1	96	73.624	ENSACIG00000021249	shq1	77	69.936	Amphilophus_citrinellus
ENSTNIG00000007354	shq1	98	72.135	ENSAOCG00000023311	shq1	76	70.000	Amphiprion_ocellaris
ENSTNIG00000007354	shq1	98	72.398	ENSAPEG00000021686	shq1	67	73.902	Amphiprion_percula
ENSTNIG00000007354	shq1	96	73.288	ENSATEG00000008475	shq1	67	74.453	Anabas_testudineus
ENSTNIG00000007354	shq1	98	52.340	ENSAPLG00000013926	SHQ1	92	53.191	Anas_platyrhynchos
ENSTNIG00000007354	shq1	94	57.773	ENSACAG00000014809	SHQ1	61	57.794	Anolis_carolinensis
ENSTNIG00000007354	shq1	99	53.419	ENSANAG00000029241	SHQ1	72	57.212	Aotus_nancymaae
ENSTNIG00000007354	shq1	99	40.870	ENSANAG00000030500	-	69	42.054	Aotus_nancymaae
ENSTNIG00000007354	shq1	96	72.936	ENSACLG00000023077	shq1	74	69.658	Astatotilapia_calliptera
ENSTNIG00000007354	shq1	94	59.441	ENSAMXG00000043822	shq1	62	66.292	Astyanax_mexicanus
ENSTNIG00000007354	shq1	87	57.895	ENSBTAG00000005436	SHQ1	72	57.933	Bos_taurus
ENSTNIG00000007354	shq1	90	57.212	ENSCJAG00000015131	SHQ1	72	57.212	Callithrix_jacchus
ENSTNIG00000007354	shq1	99	56.332	ENSCAFG00000006434	SHQ1	72	56.971	Canis_familiaris
ENSTNIG00000007354	shq1	99	56.550	ENSCAFG00020016743	SHQ1	72	57.212	Canis_lupus_dingo
ENSTNIG00000007354	shq1	98	57.206	ENSCHIG00000012271	SHQ1	65	57.933	Capra_hircus
ENSTNIG00000007354	shq1	90	54.964	ENSTSYG00000014439	SHQ1	72	54.964	Carlito_syrichta
ENSTNIG00000007354	shq1	88	50.000	ENSCAPG00000009343	SHQ1	67	50.000	Cavia_aperea
ENSTNIG00000007354	shq1	99	54.646	ENSCPOG00000011443	SHQ1	71	55.663	Cavia_porcellus
ENSTNIG00000007354	shq1	99	43.478	ENSCCAG00000036087	-	70	44.988	Cebus_capucinus
ENSTNIG00000007354	shq1	90	47.857	ENSCCAG00000027080	SHQ1	63	68.750	Cebus_capucinus
ENSTNIG00000007354	shq1	90	57.933	ENSCATG00000041238	SHQ1	71	57.933	Cercocebus_atys
ENSTNIG00000007354	shq1	95	58.676	ENSCLAG00000004206	SHQ1	72	58.173	Chinchilla_lanigera
ENSTNIG00000007354	shq1	71	55.963	ENSCSAG00000011514	SHQ1	66	55.963	Chlorocebus_sabaeus
ENSTNIG00000007354	shq1	63	65.000	ENSCHOG00000003273	-	99	44.798	Choloepus_hoffmanni
ENSTNIG00000007354	shq1	96	57.045	ENSCPBG00000006441	SHQ1	68	58.753	Chrysemys_picta_bellii
ENSTNIG00000007354	shq1	91	39.474	ENSCING00000008013	-	90	39.568	Ciona_intestinalis
ENSTNIG00000007354	shq1	87	37.563	ENSCSAVG00000002332	-	88	37.310	Ciona_savignyi
ENSTNIG00000007354	shq1	90	57.895	ENSCANG00000039295	SHQ1	72	57.692	Colobus_angolensis_palliatus
ENSTNIG00000007354	shq1	95	56.036	ENSCGRG00001012583	Shq1	73	55.529	Cricetulus_griseus_chok1gshd
ENSTNIG00000007354	shq1	95	56.036	ENSCGRG00000009849	Shq1	73	55.529	Cricetulus_griseus_crigri
ENSTNIG00000007354	shq1	91	70.773	ENSCSEG00000007829	shq1	66	70.803	Cynoglossus_semilaevis
ENSTNIG00000007354	shq1	96	69.284	ENSCVAG00000020049	shq1	73	69.626	Cyprinodon_variegatus
ENSTNIG00000007354	shq1	96	61.521	ENSDARG00000058522	shq1	69	62.530	Danio_rerio
ENSTNIG00000007354	shq1	90	57.212	ENSDNOG00000033937	SHQ1	72	57.212	Dasypus_novemcinctus
ENSTNIG00000007354	shq1	90	49.760	ENSETEG00000005766	SHQ1	72	49.760	Echinops_telfairi
ENSTNIG00000007354	shq1	80	46.049	ENSEBUG00000005445	shq1	72	47.840	Eptatretus_burgeri
ENSTNIG00000007354	shq1	98	56.763	ENSEASG00005002237	SHQ1	72	57.212	Equus_asinus_asinus
ENSTNIG00000007354	shq1	95	58.219	ENSECAG00000015673	SHQ1	70	57.452	Equus_caballus
ENSTNIG00000007354	shq1	97	56.823	ENSEEUG00000010568	SHQ1	72	56.731	Erinaceus_europaeus
ENSTNIG00000007354	shq1	90	68.293	ENSELUG00000003476	shq1	81	63.542	Esox_lucius
ENSTNIG00000007354	shq1	90	56.731	ENSFCAG00000012781	SHQ1	73	56.731	Felis_catus
ENSTNIG00000007354	shq1	91	57.619	ENSFALG00000013428	SHQ1	67	58.034	Ficedula_albicollis
ENSTNIG00000007354	shq1	90	56.010	ENSFDAG00000005595	SHQ1	64	55.288	Fukomys_damarensis
ENSTNIG00000007354	shq1	96	69.355	ENSFHEG00000017552	shq1	73	68.837	Fundulus_heteroclitus
ENSTNIG00000007354	shq1	87	67.602	ENSGMOG00000007350	shq1	100	68.112	Gadus_morhua
ENSTNIG00000007354	shq1	98	56.444	ENSGALG00000007798	SHQ1	67	57.349	Gallus_gallus
ENSTNIG00000007354	shq1	87	73.537	ENSGACG00000011797	shq1	100	74.046	Gasterosteus_aculeatus
ENSTNIG00000007354	shq1	90	57.692	ENSGGOG00000034818	SHQ1	71	57.692	Gorilla_gorilla
ENSTNIG00000007354	shq1	96	72.936	ENSHBUG00000010857	shq1	77	69.658	Haplochromis_burtoni
ENSTNIG00000007354	shq1	90	55.769	ENSHGLG00000003637	SHQ1	64	55.769	Heterocephalus_glaber_female
ENSTNIG00000007354	shq1	90	55.769	ENSHGLG00100011957	SHQ1	64	55.769	Heterocephalus_glaber_male
ENSTNIG00000007354	shq1	97	67.808	ENSHCOG00000010799	shq1	69	69.100	Hippocampus_comes
ENSTNIG00000007354	shq1	96	61.751	ENSIPUG00000001247	shq1	74	62.238	Ictalurus_punctatus
ENSTNIG00000007354	shq1	91	55.131	ENSSTOG00000010043	SHQ1	76	54.137	Ictidomys_tridecemlineatus
ENSTNIG00000007354	shq1	90	56.250	ENSJJAG00000017611	Shq1	73	56.250	Jaculus_jaculus
ENSTNIG00000007354	shq1	96	71.396	ENSKMAG00000004457	shq1	70	72.155	Kryptolebias_marmoratus
ENSTNIG00000007354	shq1	97	57.333	ENSLACG00000014243	SHQ1	62	58.894	Latimeria_chalumnae
ENSTNIG00000007354	shq1	94	64.516	ENSLOCG00000009970	shq1	72	63.789	Lepisosteus_oculatus
ENSTNIG00000007354	shq1	90	38.647	ENSMFAG00000037396	-	69	37.923	Macaca_fascicularis
ENSTNIG00000007354	shq1	90	57.933	ENSMFAG00000039148	SHQ1	71	57.933	Macaca_fascicularis
ENSTNIG00000007354	shq1	91	38.609	ENSMMUG00000021761	-	69	37.923	Macaca_mulatta
ENSTNIG00000007354	shq1	80	56.250	ENSMMUG00000009571	SHQ1	66	56.250	Macaca_mulatta
ENSTNIG00000007354	shq1	90	57.933	ENSMNEG00000032667	SHQ1	71	57.933	Macaca_nemestrina
ENSTNIG00000007354	shq1	90	57.452	ENSMLEG00000038493	SHQ1	71	57.452	Mandrillus_leucophaeus
ENSTNIG00000007354	shq1	99	72.062	ENSMAMG00000023432	shq1	66	74.126	Mastacembelus_armatus
ENSTNIG00000007354	shq1	96	72.936	ENSMZEG00005008649	shq1	77	69.658	Maylandia_zebra
ENSTNIG00000007354	shq1	98	56.984	ENSMGAG00000009640	SHQ1	68	57.933	Meleagris_gallopavo
ENSTNIG00000007354	shq1	95	55.936	ENSMAUG00000022030	Shq1	73	55.769	Mesocricetus_auratus
ENSTNIG00000007354	shq1	99	54.292	ENSMICG00000009224	SHQ1	71	56.010	Microcebus_murinus
ENSTNIG00000007354	shq1	97	55.157	ENSMOCG00000017836	Shq1	73	55.529	Microtus_ochrogaster
ENSTNIG00000007354	shq1	96	73.455	ENSMMOG00000010569	shq1	69	74.576	Mola_mola
ENSTNIG00000007354	shq1	96	54.751	ENSMODG00000003926	SHQ1	75	55.156	Monodelphis_domestica
ENSTNIG00000007354	shq1	99	71.274	ENSMALG00000008870	shq1	76	71.834	Monopterus_albus
ENSTNIG00000007354	shq1	98	55.679	MGP_CAROLIEiJ_G0028689	Shq1	59	71.053	Mus_caroli
ENSTNIG00000007354	shq1	98	55.357	ENSMUSG00000035378	Shq1	73	56.250	Mus_musculus
ENSTNIG00000007354	shq1	98	55.921	MGP_PahariEiJ_G0022440	Shq1	73	56.971	Mus_pahari
ENSTNIG00000007354	shq1	99	55.098	MGP_SPRETEiJ_G0029717	Shq1	73	55.769	Mus_spretus
ENSTNIG00000007354	shq1	99	55.895	ENSMPUG00000017006	SHQ1	70	57.212	Mustela_putorius_furo
ENSTNIG00000007354	shq1	88	54.074	ENSMLUG00000013539	SHQ1	70	55.014	Myotis_lucifugus
ENSTNIG00000007354	shq1	100	45.877	ENSNGAG00000023317	Shq1	72	49.024	Nannospalax_galili
ENSTNIG00000007354	shq1	77	70.605	ENSNBRG00000024004	shq1	73	66.755	Neolamprologus_brichardi
ENSTNIG00000007354	shq1	98	54.860	ENSNLEG00000002731	SHQ1	71	58.173	Nomascus_leucogenys
ENSTNIG00000007354	shq1	82	58.333	ENSMEUG00000009350	-	67	58.333	Notamacropus_eugenii
ENSTNIG00000007354	shq1	58	67.241	ENSOPRG00000013963	-	73	67.241	Ochotona_princeps
ENSTNIG00000007354	shq1	99	54.867	ENSODEG00000009192	SHQ1	76	55.904	Octodon_degus
ENSTNIG00000007354	shq1	96	72.936	ENSONIG00000020264	shq1	77	69.658	Oreochromis_niloticus
ENSTNIG00000007354	shq1	90	57.212	ENSOCUG00000016695	SHQ1	71	57.212	Oryctolagus_cuniculus
ENSTNIG00000007354	shq1	94	70.413	ENSORLG00000023538	shq1	74	70.433	Oryzias_latipes
ENSTNIG00000007354	shq1	94	70.413	ENSORLG00020003697	shq1	73	70.192	Oryzias_latipes_hni
ENSTNIG00000007354	shq1	94	69.725	ENSORLG00015021040	shq1	74	69.856	Oryzias_latipes_hsok
ENSTNIG00000007354	shq1	95	70.396	ENSOMEG00000001225	shq1	74	70.732	Oryzias_melastigma
ENSTNIG00000007354	shq1	99	56.129	ENSOGAG00000003898	SHQ1	73	57.041	Otolemur_garnettii
ENSTNIG00000007354	shq1	98	56.608	ENSOARG00000009547	SHQ1	72	57.279	Ovis_aries
ENSTNIG00000007354	shq1	90	39.857	ENSPPAG00000043263	-	69	40.241	Pan_paniscus
ENSTNIG00000007354	shq1	90	58.413	ENSPPAG00000027714	SHQ1	71	58.413	Pan_paniscus
ENSTNIG00000007354	shq1	90	56.731	ENSPPRG00000004769	SHQ1	72	56.731	Panthera_pardus
ENSTNIG00000007354	shq1	90	54.745	ENSPTIG00000011478	SHQ1	71	54.745	Panthera_tigris_altaica
ENSTNIG00000007354	shq1	90	39.759	ENSPTRG00000048303	-	68	39.759	Pan_troglodytes
ENSTNIG00000007354	shq1	90	58.413	ENSPTRG00000015106	SHQ1	71	58.413	Pan_troglodytes
ENSTNIG00000007354	shq1	90	56.971	ENSPANG00000002881	SHQ1	71	58.413	Papio_anubis
ENSTNIG00000007354	shq1	94	62.972	ENSPKIG00000021517	shq1	72	62.683	Paramormyrops_kingsleyae
ENSTNIG00000007354	shq1	97	54.688	ENSPSIG00000005536	SHQ1	68	56.355	Pelodiscus_sinensis
ENSTNIG00000007354	shq1	97	65.101	ENSPMGG00000008838	shq1	69	67.233	Periophthalmus_magnuspinnatus
ENSTNIG00000007354	shq1	90	56.115	ENSPEMG00000000251	Shq1	73	55.288	Peromyscus_maniculatus_bairdii
ENSTNIG00000007354	shq1	94	55.530	ENSPMAG00000005372	shq1	93	56.595	Petromyzon_marinus
ENSTNIG00000007354	shq1	96	69.495	ENSPFOG00000003118	shq1	79	69.425	Poecilia_formosa
ENSTNIG00000007354	shq1	76	67.536	ENSPMEG00000011076	shq1	75	67.733	Poecilia_mexicana
ENSTNIG00000007354	shq1	84	69.531	ENSPREG00000000591	shq1	73	67.352	Poecilia_reticulata
ENSTNIG00000007354	shq1	90	58.413	ENSPPYG00000013717	SHQ1	71	58.413	Pongo_abelii
ENSTNIG00000007354	shq1	91	56.802	ENSPCAG00000009035	SHQ1	73	56.971	Procavia_capensis
ENSTNIG00000007354	shq1	90	57.554	ENSPCOG00000008415	SHQ1	71	57.554	Propithecus_coquereli
ENSTNIG00000007354	shq1	99	55.677	ENSPVAG00000017392	SHQ1	72	56.490	Pteropus_vampyrus
ENSTNIG00000007354	shq1	96	72.936	ENSPNYG00000003878	shq1	77	69.658	Pundamilia_nyererei
ENSTNIG00000007354	shq1	94	63.636	ENSPNAG00000026840	shq1	67	63.990	Pygocentrus_nattereri
ENSTNIG00000007354	shq1	98	55.357	ENSRNOG00000005433	Shq1	69	56.490	Rattus_norvegicus
ENSTNIG00000007354	shq1	90	55.718	ENSRBIG00000026280	SHQ1	71	55.718	Rhinopithecus_bieti
ENSTNIG00000007354	shq1	90	58.413	ENSRROG00000034126	SHQ1	72	58.413	Rhinopithecus_roxellana
ENSTNIG00000007354	shq1	90	50.000	ENSSBOG00000021038	SHQ1	69	49.640	Saimiri_boliviensis_boliviensis
ENSTNIG00000007354	shq1	95	56.849	ENSSHAG00000015077	SHQ1	74	57.074	Sarcophilus_harrisii
ENSTNIG00000007354	shq1	98	62.832	ENSSFOG00015016241	shq1	74	64.508	Scleropages_formosus
ENSTNIG00000007354	shq1	97	74.545	ENSSMAG00000016151	shq1	67	75.366	Scophthalmus_maximus
ENSTNIG00000007354	shq1	94	75.234	ENSSDUG00000011986	shq1	67	75.122	Seriola_dumerili
ENSTNIG00000007354	shq1	98	71.396	ENSSLDG00000013908	shq1	67	73.415	Seriola_lalandi_dorsalis
ENSTNIG00000007354	shq1	75	57.310	ENSSARG00000007119	SHQ1	60	56.433	Sorex_araneus
ENSTNIG00000007354	shq1	79	54.270	ENSSPUG00000011526	-	61	55.183	Sphenodon_punctatus
ENSTNIG00000007354	shq1	99	56.512	ENSSSCG00000011518	SHQ1	72	56.971	Sus_scrofa
ENSTNIG00000007354	shq1	90	57.895	ENSTGUG00000009933	SHQ1	72	57.656	Taeniopygia_guttata
ENSTNIG00000007354	shq1	90	74.638	ENSTRUG00000009446	shq1	70	74.638	Takifugu_rubripes
ENSTNIG00000007354	shq1	96	57.500	ENSTTRG00000005320	SHQ1	72	57.452	Tursiops_truncatus
ENSTNIG00000007354	shq1	98	56.347	ENSUMAG00000024031	SHQ1	71	57.317	Ursus_maritimus
ENSTNIG00000007354	shq1	57	55.472	ENSVPAG00000004880	SHQ1	54	55.594	Vicugna_pacos
ENSTNIG00000007354	shq1	99	56.114	ENSVVUG00000013906	SHQ1	72	56.731	Vulpes_vulpes
ENSTNIG00000007354	shq1	96	55.760	ENSXETG00000032215	shq1	67	55.474	Xenopus_tropicalis