EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000007427 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1321 bases
Position: chrUn_random:1629046-1630366
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010233	RRM_1	PF00076.22	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010414	-	924	-	ENSTNIP00000010233	307 (aa)	-	H3CPQ0

Gene Model

Click here to download ENSTNIG00000007427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000007427	-	83	67.954	ENSTNIG00000000334	-	94	68.045
ENSTNIG00000007427	-	73	48.101	ENSTNIG00000005594	-	75	48.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007427	-	73	51.786	ENSG00000184672	RALYL	93	74.684	Homo_sapiens
ENSTNIG00000007427	-	83	83.529	ENSAPOG00000006963	hnrnpc	83	82.625	Acanthochromis_polyacanthus
ENSTNIG00000007427	-	84	78.077	ENSACIG00000016568	-	79	83.568	Amphilophus_citrinellus
ENSTNIG00000007427	-	84	83.525	ENSACIG00000000270	-	86	83.908	Amphilophus_citrinellus
ENSTNIG00000007427	-	83	80.078	ENSAOCG00000021616	-	79	80.385	Amphiprion_ocellaris
ENSTNIG00000007427	-	83	83.137	ENSAOCG00000003896	-	83	82.239	Amphiprion_ocellaris
ENSTNIG00000007427	-	83	83.137	ENSAPEG00000001489	-	83	82.239	Amphiprion_percula
ENSTNIG00000007427	-	84	80.385	ENSAPEG00000019962	-	82	80.385	Amphiprion_percula
ENSTNIG00000007427	-	84	80.460	ENSATEG00000018006	-	77	84.507	Anabas_testudineus
ENSTNIG00000007427	-	84	84.170	ENSATEG00000011734	-	85	84.556	Anabas_testudineus
ENSTNIG00000007427	-	86	44.056	ENSAPLG00000015574	RALYL	75	49.333	Anas_platyrhynchos
ENSTNIG00000007427	-	86	44.366	ENSACAG00000028464	RALYL	74	50.220	Anolis_carolinensis
ENSTNIG00000007427	-	73	51.786	ENSANAG00000023383	RALYL	73	53.052	Aotus_nancymaae
ENSTNIG00000007427	-	83	79.216	ENSACLG00000013636	-	85	81.923	Astatotilapia_calliptera
ENSTNIG00000007427	-	84	76.718	ENSACLG00000005707	-	86	77.907	Astatotilapia_calliptera
ENSTNIG00000007427	-	83	79.608	ENSACLG00000000995	-	83	82.308	Astatotilapia_calliptera
ENSTNIG00000007427	-	84	73.541	ENSAMXG00000034915	zgc:55733	87	70.817	Astyanax_mexicanus
ENSTNIG00000007427	-	69	70.093	ENSAMXG00000042946	hnrnpc	94	67.742	Astyanax_mexicanus
ENSTNIG00000007427	-	73	51.786	ENSCJAG00000000402	RALYL	73	53.052	Callithrix_jacchus
ENSTNIG00000007427	-	87	44.170	ENSCPOG00000012314	RALYL	74	51.121	Cavia_porcellus
ENSTNIG00000007427	-	73	51.786	ENSCCAG00000025003	RALYL	77	74.684	Cebus_capucinus
ENSTNIG00000007427	-	73	51.786	ENSCATG00000042145	RALYL	73	53.052	Cercocebus_atys
ENSTNIG00000007427	-	73	48.085	ENSCLAG00000005228	RALYL	74	51.121	Chinchilla_lanigera
ENSTNIG00000007427	-	70	48.230	ENSCHOG00000013228	RALYL	74	47.598	Choloepus_hoffmanni
ENSTNIG00000007427	-	73	51.786	ENSCANG00000039144	RALYL	73	53.052	Colobus_angolensis_palliatus
ENSTNIG00000007427	-	73	48.085	ENSCGRG00001009241	Ralyl	74	50.661	Cricetulus_griseus_chok1gshd
ENSTNIG00000007427	-	83	74.319	ENSCSEG00000021349	-	79	72.587	Cynoglossus_semilaevis
ENSTNIG00000007427	-	73	71.053	ENSCSEG00000019769	-	71	70.089	Cynoglossus_semilaevis
ENSTNIG00000007427	-	83	79.297	ENSCVAG00000016981	-	78	79.231	Cyprinodon_variegatus
ENSTNIG00000007427	-	88	65.934	ENSCVAG00000002797	-	86	64.368	Cyprinodon_variegatus
ENSTNIG00000007427	-	78	73.859	ENSDARG00000053810	hnrnpc	80	70.498	Danio_rerio
ENSTNIG00000007427	-	84	74.806	ENSDARG00000103845	zgc:55733	78	77.934	Danio_rerio
ENSTNIG00000007427	-	73	48.936	ENSDORG00000003721	Ralyl	74	51.101	Dipodomys_ordii
ENSTNIG00000007427	-	53	54.598	ENSETEG00000014028	RALYL	82	57.407	Echinops_telfairi
ENSTNIG00000007427	-	85	41.328	ENSEBUG00000012363	hnrnpc	64	45.291	Eptatretus_burgeri
ENSTNIG00000007427	-	71	46.188	ENSEBUG00000006049	RALYL	73	46.445	Eptatretus_burgeri
ENSTNIG00000007427	-	86	45.070	ENSEEUG00000007202	RALYL	75	50.224	Erinaceus_europaeus
ENSTNIG00000007427	-	77	73.279	ENSELUG00000007714	-	83	73.251	Esox_lucius
ENSTNIG00000007427	-	83	75.096	ENSELUG00000004132	-	88	71.536	Esox_lucius
ENSTNIG00000007427	-	86	44.366	ENSFALG00000008647	RALYL	95	50.661	Ficedula_albicollis
ENSTNIG00000007427	-	84	74.453	ENSFHEG00000007278	-	82	74.453	Fundulus_heteroclitus
ENSTNIG00000007427	-	88	75.735	ENSFHEG00000003605	-	84	75.096	Fundulus_heteroclitus
ENSTNIG00000007427	-	73	51.339	ENSGALG00000036938	RALYL	74	49.333	Gallus_gallus
ENSTNIG00000007427	-	88	75.735	ENSGAFG00000020486	-	83	74.713	Gambusia_affinis
ENSTNIG00000007427	-	84	79.151	ENSGAFG00000020992	-	82	78.764	Gambusia_affinis
ENSTNIG00000007427	-	88	75.735	ENSGACG00000017772	-	97	76.953	Gasterosteus_aculeatus
ENSTNIG00000007427	-	73	67.826	ENSGACG00000018932	-	84	69.484	Gasterosteus_aculeatus
ENSTNIG00000007427	-	73	51.786	ENSGGOG00000000841	RALYL	73	53.052	Gorilla_gorilla
ENSTNIG00000007427	-	84	77.099	ENSHBUG00000010527	-	81	77.481	Haplochromis_burtoni
ENSTNIG00000007427	-	83	80.000	ENSHBUG00000018342	-	83	82.692	Haplochromis_burtoni
ENSTNIG00000007427	-	73	47.660	ENSHGLG00000004866	RALYL	74	50.224	Heterocephalus_glaber_female
ENSTNIG00000007427	-	73	47.660	ENSHGLG00100017480	RALYL	74	50.224	Heterocephalus_glaber_male
ENSTNIG00000007427	-	82	68.441	ENSHCOG00000012333	hnrnpc	89	68.978	Hippocampus_comes
ENSTNIG00000007427	-	84	72.868	ENSIPUG00000008666	zgc:55733	91	78.199	Ictalurus_punctatus
ENSTNIG00000007427	-	83	74.806	ENSIPUG00000011271	hnrnpc	94	76.577	Ictalurus_punctatus
ENSTNIG00000007427	-	73	48.511	ENSSTOG00000012583	RALYL	75	50.661	Ictidomys_tridecemlineatus
ENSTNIG00000007427	-	88	82.353	ENSKMAG00000011170	-	83	81.853	Kryptolebias_marmoratus
ENSTNIG00000007427	-	83	78.516	ENSKMAG00000018265	-	80	78.462	Kryptolebias_marmoratus
ENSTNIG00000007427	-	95	73.026	ENSLBEG00000024418	-	86	74.340	Labrus_bergylta
ENSTNIG00000007427	-	89	79.927	ENSLBEG00000006979	-	85	79.762	Labrus_bergylta
ENSTNIG00000007427	-	83	75.875	ENSLBEG00000006193	-	80	78.378	Labrus_bergylta
ENSTNIG00000007427	-	84	65.672	ENSLOCG00000002560	hnrnpc	89	66.421	Lepisosteus_oculatus
ENSTNIG00000007427	-	73	51.786	ENSMNEG00000033288	RALYL	73	53.052	Macaca_nemestrina
ENSTNIG00000007427	-	73	51.786	ENSMLEG00000038284	RALYL	73	53.052	Mandrillus_leucophaeus
ENSTNIG00000007427	-	84	79.310	ENSMAMG00000008033	-	89	79.693	Mastacembelus_armatus
ENSTNIG00000007427	-	83	83.529	ENSMAMG00000012236	-	82	83.012	Mastacembelus_armatus
ENSTNIG00000007427	-	84	79.070	ENSMZEG00005020460	-	83	82.308	Maylandia_zebra
ENSTNIG00000007427	-	84	76.718	ENSMZEG00005024249	-	81	77.907	Maylandia_zebra
ENSTNIG00000007427	-	73	48.085	ENSMAUG00000015149	Ralyl	74	50.661	Mesocricetus_auratus
ENSTNIG00000007427	-	73	50.893	ENSMICG00000005558	RALYL	85	70.238	Microcebus_murinus
ENSTNIG00000007427	-	73	48.085	ENSMOCG00000017371	Ralyl	74	50.661	Microtus_ochrogaster
ENSTNIG00000007427	-	84	83.012	ENSMMOG00000021465	-	89	84.231	Mola_mola
ENSTNIG00000007427	-	82	76.285	ENSMMOG00000019520	-	84	77.647	Mola_mola
ENSTNIG00000007427	-	84	77.308	ENSMALG00000014623	-	81	75.000	Monopterus_albus
ENSTNIG00000007427	-	84	72.587	ENSMALG00000007520	-	85	73.745	Monopterus_albus
ENSTNIG00000007427	-	73	48.511	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSTNIG00000007427	-	73	49.362	ENSMPUG00000010724	RALYL	74	49.780	Mustela_putorius_furo
ENSTNIG00000007427	-	73	48.085	ENSNGAG00000013375	Ralyl	74	50.673	Nannospalax_galili
ENSTNIG00000007427	-	84	77.099	ENSNBRG00000015676	-	80	77.481	Neolamprologus_brichardi
ENSTNIG00000007427	-	84	80.695	ENSNBRG00000004912	-	84	83.077	Neolamprologus_brichardi
ENSTNIG00000007427	-	73	51.786	ENSNLEG00000002702	RALYL	70	53.052	Nomascus_leucogenys
ENSTNIG00000007427	-	59	44.103	ENSOPRG00000013650	-	96	44.041	Ochotona_princeps
ENSTNIG00000007427	-	86	45.455	ENSODEG00000001012	RALYL	74	50.673	Octodon_degus
ENSTNIG00000007427	-	84	77.099	ENSONIG00000018350	-	81	77.481	Oreochromis_niloticus
ENSTNIG00000007427	-	83	80.784	ENSONIG00000007859	-	91	79.851	Oreochromis_niloticus
ENSTNIG00000007427	-	83	77.947	ENSORLG00000003144	-	79	77.528	Oryzias_latipes
ENSTNIG00000007427	-	83	71.984	ENSORLG00000009999	-	83	72.414	Oryzias_latipes
ENSTNIG00000007427	-	83	71.595	ENSORLG00020018228	hnrnpc	83	72.031	Oryzias_latipes_hni
ENSTNIG00000007427	-	83	77.947	ENSORLG00015009460	-	79	77.528	Oryzias_latipes_hsok
ENSTNIG00000007427	-	83	71.984	ENSORLG00015019755	-	83	72.414	Oryzias_latipes_hsok
ENSTNIG00000007427	-	83	72.374	ENSOMEG00000020488	-	83	72.797	Oryzias_melastigma
ENSTNIG00000007427	-	83	81.641	ENSOMEG00000022665	-	80	81.154	Oryzias_melastigma
ENSTNIG00000007427	-	73	51.786	ENSPPAG00000038705	RALYL	73	53.052	Pan_paniscus
ENSTNIG00000007427	-	73	52.889	ENSPPRG00000018612	RALYL	73	53.456	Panthera_pardus
ENSTNIG00000007427	-	73	52.889	ENSPTIG00000020331	RALYL	73	53.456	Panthera_tigris_altaica
ENSTNIG00000007427	-	73	51.786	ENSPTRG00000020381	RALYL	73	53.052	Pan_troglodytes
ENSTNIG00000007427	-	73	51.786	ENSPANG00000029305	RALYL	73	53.052	Papio_anubis
ENSTNIG00000007427	-	84	77.947	ENSPKIG00000022837	-	82	79.087	Paramormyrops_kingsleyae
ENSTNIG00000007427	-	84	75.000	ENSPKIG00000008592	-	82	75.758	Paramormyrops_kingsleyae
ENSTNIG00000007427	-	73	48.945	ENSPSIG00000011135	RALYL	74	50.222	Pelodiscus_sinensis
ENSTNIG00000007427	-	72	83.636	ENSPMGG00000013144	-	79	82.160	Periophthalmus_magnuspinnatus
ENSTNIG00000007427	-	72	71.946	ENSPMGG00000017774	-	88	62.844	Periophthalmus_magnuspinnatus
ENSTNIG00000007427	-	73	48.085	ENSPEMG00000016447	Ralyl	74	50.661	Peromyscus_maniculatus_bairdii
ENSTNIG00000007427	-	70	51.528	ENSPMAG00000002407	RALYL	96	49.565	Petromyzon_marinus
ENSTNIG00000007427	-	88	74.638	ENSPFOG00000001583	-	83	75.573	Poecilia_formosa
ENSTNIG00000007427	-	83	78.824	ENSPFOG00000002643	-	81	77.567	Poecilia_formosa
ENSTNIG00000007427	-	83	78.824	ENSPLAG00000000061	-	79	78.764	Poecilia_latipinna
ENSTNIG00000007427	-	88	74.182	ENSPLAG00000015305	-	83	75.096	Poecilia_latipinna
ENSTNIG00000007427	-	88	77.941	ENSPMEG00000004802	-	83	76.245	Poecilia_mexicana
ENSTNIG00000007427	-	83	78.431	ENSPMEG00000016524	-	79	78.378	Poecilia_mexicana
ENSTNIG00000007427	-	83	76.265	ENSPREG00000007928	-	83	76.245	Poecilia_reticulata
ENSTNIG00000007427	-	83	78.431	ENSPREG00000001852	-	85	78.378	Poecilia_reticulata
ENSTNIG00000007427	-	73	47.660	ENSPVAG00000010821	RALYL	73	49.554	Pteropus_vampyrus
ENSTNIG00000007427	-	84	77.099	ENSPNYG00000003747	-	86	77.481	Pundamilia_nyererei
ENSTNIG00000007427	-	84	79.923	ENSPNYG00000020293	-	87	77.068	Pundamilia_nyererei
ENSTNIG00000007427	-	78	73.859	ENSPNAG00000015686	hnrnpc	86	68.321	Pygocentrus_nattereri
ENSTNIG00000007427	-	84	70.270	ENSPNAG00000019200	zgc:55733	71	76.168	Pygocentrus_nattereri
ENSTNIG00000007427	-	73	51.786	ENSRROG00000023925	RALYL	82	72.840	Rhinopithecus_roxellana
ENSTNIG00000007427	-	84	70.943	ENSSFOG00015012015	-	80	77.315	Scleropages_formosus
ENSTNIG00000007427	-	83	77.778	ENSSFOG00015012924	-	93	82.609	Scleropages_formosus
ENSTNIG00000007427	-	82	75.000	ENSSMAG00000011147	-	80	75.096	Scophthalmus_maximus
ENSTNIG00000007427	-	83	80.392	ENSSMAG00000013592	-	81	79.537	Scophthalmus_maximus
ENSTNIG00000007427	-	84	80.000	ENSSDUG00000006730	-	81	79.615	Seriola_dumerili
ENSTNIG00000007427	-	87	85.448	ENSSDUG00000001723	-	86	82.857	Seriola_dumerili
ENSTNIG00000007427	-	87	85.075	ENSSLDG00000007454	-	83	84.170	Seriola_lalandi_dorsalis
ENSTNIG00000007427	-	84	80.000	ENSSLDG00000007474	-	88	79.615	Seriola_lalandi_dorsalis
ENSTNIG00000007427	-	88	84.074	ENSSPAG00000023204	-	83	83.784	Stegastes_partitus
ENSTNIG00000007427	-	84	80.695	ENSSPAG00000013996	-	80	81.081	Stegastes_partitus
ENSTNIG00000007427	-	86	44.366	ENSTGUG00000011689	RALYL	75	49.333	Taeniopygia_guttata
ENSTNIG00000007427	-	97	78.899	ENSTRUG00000020158	-	99	77.982	Takifugu_rubripes
ENSTNIG00000007427	-	73	43.697	ENSTBEG00000005551	RALYL	85	44.493	Tupaia_belangeri
ENSTNIG00000007427	-	86	43.972	ENSTTRG00000015762	RALYL	73	48.387	Tursiops_truncatus
ENSTNIG00000007427	-	73	48.430	ENSVPAG00000008501	RALYL	73	50.472	Vicugna_pacos
ENSTNIG00000007427	-	50	85.276	ENSXCOG00000019434	-	78	85.792	Xiphophorus_couchianus
ENSTNIG00000007427	-	87	72.426	ENSXCOG00000006552	-	82	70.656	Xiphophorus_couchianus
ENSTNIG00000007427	-	83	78.431	ENSXMAG00000022849	-	83	78.378	Xiphophorus_maculatus
ENSTNIG00000007427	-	88	77.206	ENSXMAG00000009333	-	83	76.628	Xiphophorus_maculatus