EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000007441 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b%2C subunit 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4978 bases
Position: chrUn_random:1505628-1510605
Accession: ZDB-GENE-070928-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000934	DUF382	PF04037.13	1.2e-58	1	1
ENSTNIP00000010247	DUF382	PF04037.13	1.2e-58	1	1
ENSTNIP00000010247	SAP	PF02037.27	1.7e-10	1	1
ENSTNIP00000000934	SAP	PF02037.27	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010428	-	2448	-	ENSTNIP00000010247	815 (aa)	-	H3CPR4
ENSTNIT00000002084	-	2388	-	ENSTNIP00000000934	795 (aa)	-	H3BY69

Gene Model

Click here to download ENSTNIG00000007441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007441	sf3b2	88	69.612	ENSG00000087365	SF3B2	99	86.751	Homo_sapiens
ENSTNIG00000007441	sf3b2	97	79.017	ENSAPOG00000001974	sf3b2	93	79.011	Acanthochromis_polyacanthus
ENSTNIG00000007441	sf3b2	85	71.237	ENSAMEG00000017206	SF3B2	86	70.423	Ailuropoda_melanoleuca
ENSTNIG00000007441	sf3b2	100	74.884	ENSACIG00000000624	sf3b2	97	77.374	Amphilophus_citrinellus
ENSTNIG00000007441	sf3b2	100	78.049	ENSAOCG00000009207	sf3b2	97	79.790	Amphiprion_ocellaris
ENSTNIG00000007441	sf3b2	100	78.713	ENSAPEG00000002762	sf3b2	95	79.883	Amphiprion_percula
ENSTNIG00000007441	sf3b2	100	56.208	ENSACAG00000008615	SF3B2	98	54.515	Anolis_carolinensis
ENSTNIG00000007441	sf3b2	88	69.612	ENSANAG00000029120	SF3B2	86	70.077	Aotus_nancymaae
ENSTNIG00000007441	sf3b2	100	79.788	ENSACLG00000014771	sf3b2	97	79.318	Astatotilapia_calliptera
ENSTNIG00000007441	sf3b2	100	71.968	ENSAMXG00000007929	sf3b2	94	72.954	Astyanax_mexicanus
ENSTNIG00000007441	sf3b2	85	70.929	ENSBTAG00000002778	SF3B2	86	70.513	Bos_taurus
ENSTNIG00000007441	sf3b2	65	47.568	WBGene00021004	sftb-2	94	46.957	Caenorhabditis_elegans
ENSTNIG00000007441	sf3b2	88	69.612	ENSCJAG00000001656	SF3B2	86	70.077	Callithrix_jacchus
ENSTNIG00000007441	sf3b2	85	71.602	ENSCAFG00000013033	SF3B2	86	70.000	Canis_familiaris
ENSTNIG00000007441	sf3b2	85	71.602	ENSCAFG00020015382	SF3B2	86	70.000	Canis_lupus_dingo
ENSTNIG00000007441	sf3b2	85	70.929	ENSCHIG00000011211	SF3B2	86	70.513	Capra_hircus
ENSTNIG00000007441	sf3b2	100	64.468	ENSTSYG00000000959	SF3B2	86	69.437	Carlito_syrichta
ENSTNIG00000007441	sf3b2	51	56.542	ENSCAPG00000006065	SF3B2	68	63.840	Cavia_aperea
ENSTNIG00000007441	sf3b2	77	66.566	ENSCPOG00000008294	SF3B2	84	67.404	Cavia_porcellus
ENSTNIG00000007441	sf3b2	89	70.990	ENSCCAG00000035256	SF3B2	91	67.044	Cebus_capucinus
ENSTNIG00000007441	sf3b2	88	69.612	ENSCATG00000042240	SF3B2	89	70.077	Cercocebus_atys
ENSTNIG00000007441	sf3b2	88	69.344	ENSCLAG00000016852	SF3B2	86	69.895	Chinchilla_lanigera
ENSTNIG00000007441	sf3b2	85	70.889	ENSCSAG00000008121	SF3B2	86	68.798	Chlorocebus_sabaeus
ENSTNIG00000007441	sf3b2	76	82.564	ENSCHOG00000001476	SF3B2	78	83.673	Choloepus_hoffmanni
ENSTNIG00000007441	sf3b2	75	76.899	ENSCPBG00000022465	SF3B2	87	78.076	Chrysemys_picta_bellii
ENSTNIG00000007441	sf3b2	64	65.524	ENSCING00000005665	-	84	65.465	Ciona_intestinalis
ENSTNIG00000007441	sf3b2	65	64.353	ENSCSAVG00000002029	-	84	64.583	Ciona_savignyi
ENSTNIG00000007441	sf3b2	88	69.612	ENSCANG00000039680	SF3B2	86	70.026	Colobus_angolensis_palliatus
ENSTNIG00000007441	sf3b2	88	68.809	ENSCGRG00001015741	Sf3b2	86	70.157	Cricetulus_griseus_chok1gshd
ENSTNIG00000007441	sf3b2	88	68.809	ENSCGRG00000018110	Sf3b2	89	70.157	Cricetulus_griseus_crigri
ENSTNIG00000007441	sf3b2	88	76.334	ENSCSEG00000000230	sf3b2	88	76.604	Cynoglossus_semilaevis
ENSTNIG00000007441	sf3b2	100	75.508	ENSCVAG00000003357	sf3b2	97	76.914	Cyprinodon_variegatus
ENSTNIG00000007441	sf3b2	100	69.668	ENSDARG00000018049	sf3b2	98	71.056	Danio_rerio
ENSTNIG00000007441	sf3b2	88	69.519	ENSDNOG00000009484	SF3B2	96	69.588	Dasypus_novemcinctus
ENSTNIG00000007441	sf3b2	88	69.344	ENSDORG00000002495	Sf3b2	86	70.288	Dipodomys_ordii
ENSTNIG00000007441	sf3b2	58	77.650	ENSETEG00000020284	SF3B2	79	78.322	Echinops_telfairi
ENSTNIG00000007441	sf3b2	67	72.545	ENSEBUG00000013703	sf3b2	58	76.173	Eptatretus_burgeri
ENSTNIG00000007441	sf3b2	85	71.198	ENSEASG00005004508	SF3B2	86	70.385	Equus_asinus_asinus
ENSTNIG00000007441	sf3b2	85	71.198	ENSECAG00000024461	SF3B2	86	70.385	Equus_caballus
ENSTNIG00000007441	sf3b2	61	86.667	ENSEEUG00000014278	-	58	86.667	Erinaceus_europaeus
ENSTNIG00000007441	sf3b2	100	72.433	ENSELUG00000005586	sf3b2	98	73.214	Esox_lucius
ENSTNIG00000007441	sf3b2	88	70.053	ENSFCAG00000013289	SF3B2	86	70.604	Felis_catus
ENSTNIG00000007441	sf3b2	82	63.610	ENSFALG00000014653	SF3B2	95	64.663	Ficedula_albicollis
ENSTNIG00000007441	sf3b2	88	69.007	ENSFDAG00000019806	SF3B2	86	69.701	Fukomys_damarensis
ENSTNIG00000007441	sf3b2	100	75.118	ENSFHEG00000020968	sf3b2	97	72.885	Fundulus_heteroclitus
ENSTNIG00000007441	sf3b2	78	80.428	ENSGMOG00000012131	sf3b2	100	80.670	Gadus_morhua
ENSTNIG00000007441	sf3b2	100	77.751	ENSGAFG00000001675	sf3b2	97	76.540	Gambusia_affinis
ENSTNIG00000007441	sf3b2	78	81.583	ENSGACG00000019012	sf3b2	100	82.040	Gasterosteus_aculeatus
ENSTNIG00000007441	sf3b2	100	65.684	ENSGAGG00000023916	SF3B2	88	71.447	Gopherus_agassizii
ENSTNIG00000007441	sf3b2	76	85.634	ENSGGOG00000028448	SF3B2	85	86.761	Gorilla_gorilla
ENSTNIG00000007441	sf3b2	100	79.788	ENSHBUG00000017349	sf3b2	97	79.318	Haplochromis_burtoni
ENSTNIG00000007441	sf3b2	88	69.344	ENSHGLG00000010807	SF3B2	86	70.026	Heterocephalus_glaber_female
ENSTNIG00000007441	sf3b2	88	69.344	ENSHGLG00100006361	SF3B2	86	70.077	Heterocephalus_glaber_male
ENSTNIG00000007441	sf3b2	100	73.918	ENSHCOG00000016203	sf3b2	97	74.912	Hippocampus_comes
ENSTNIG00000007441	sf3b2	100	70.953	ENSIPUG00000009383	sf3b2	87	75.032	Ictalurus_punctatus
ENSTNIG00000007441	sf3b2	88	69.076	ENSSTOG00000028892	SF3B2	86	69.764	Ictidomys_tridecemlineatus
ENSTNIG00000007441	sf3b2	88	68.659	ENSJJAG00000018193	Sf3b2	86	70.274	Jaculus_jaculus
ENSTNIG00000007441	sf3b2	65	89.205	ENSKMAG00000020181	sf3b2	87	76.172	Kryptolebias_marmoratus
ENSTNIG00000007441	sf3b2	100	79.395	ENSLBEG00000027739	sf3b2	97	80.453	Labrus_bergylta
ENSTNIG00000007441	sf3b2	82	76.535	ENSLACG00000010429	SF3B2	98	62.570	Latimeria_chalumnae
ENSTNIG00000007441	sf3b2	88	69.786	ENSLAFG00000002128	SF3B2	86	67.979	Loxodonta_africana
ENSTNIG00000007441	sf3b2	88	69.519	ENSMFAG00000003064	SF3B2	89	69.987	Macaca_fascicularis
ENSTNIG00000007441	sf3b2	88	67.112	ENSMMUG00000011743	SF3B2	86	67.263	Macaca_mulatta
ENSTNIG00000007441	sf3b2	85	70.889	ENSMNEG00000034437	SF3B2	89	70.077	Macaca_nemestrina
ENSTNIG00000007441	sf3b2	85	70.889	ENSMLEG00000029373	SF3B2	89	70.077	Mandrillus_leucophaeus
ENSTNIG00000007441	sf3b2	100	79.143	ENSMAMG00000014103	sf3b2	97	79.466	Mastacembelus_armatus
ENSTNIG00000007441	sf3b2	100	79.788	ENSMZEG00005020789	sf3b2	97	79.318	Maylandia_zebra
ENSTNIG00000007441	sf3b2	51	84.530	ENSMAUG00000017040	Sf3b2	96	85.635	Mesocricetus_auratus
ENSTNIG00000007441	sf3b2	99	63.991	ENSMICG00000016942	-	97	64.377	Microcebus_murinus
ENSTNIG00000007441	sf3b2	88	69.372	ENSMICG00000008565	-	86	69.910	Microcebus_murinus
ENSTNIG00000007441	sf3b2	88	68.942	ENSMOCG00000003136	Sf3b2	86	70.288	Microtus_ochrogaster
ENSTNIG00000007441	sf3b2	100	76.914	ENSMMOG00000012928	sf3b2	87	79.329	Mola_mola
ENSTNIG00000007441	sf3b2	74	73.885	ENSMODG00000025020	-	99	73.567	Monodelphis_domestica
ENSTNIG00000007441	sf3b2	74	75.981	ENSMODG00000008490	-	93	70.757	Monodelphis_domestica
ENSTNIG00000007441	sf3b2	100	74.852	ENSMALG00000015137	sf3b2	85	78.104	Monopterus_albus
ENSTNIG00000007441	sf3b2	88	69.344	MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.698	Mus_caroli
ENSTNIG00000007441	sf3b2	88	68.809	ENSMUSG00000024853	Sf3b2	86	70.157	Mus_musculus
ENSTNIG00000007441	sf3b2	88	68.675	MGP_PahariEiJ_G0014036	Sf3b2	86	70.026	Mus_pahari
ENSTNIG00000007441	sf3b2	88	68.809	MGP_SPRETEiJ_G0023453	Sf3b2	86	70.026	Mus_spretus
ENSTNIG00000007441	sf3b2	85	71.602	ENSMPUG00000011349	SF3B2	86	70.000	Mustela_putorius_furo
ENSTNIG00000007441	sf3b2	85	71.063	ENSMLUG00000011136	SF3B2	86	70.256	Myotis_lucifugus
ENSTNIG00000007441	sf3b2	88	69.705	ENSNGAG00000012103	Sf3b2	86	70.118	Nannospalax_galili
ENSTNIG00000007441	sf3b2	87	66.138	ENSNLEG00000006007	SF3B2	87	66.836	Nomascus_leucogenys
ENSTNIG00000007441	sf3b2	78	80.508	ENSMEUG00000000019	SF3B2	81	81.638	Notamacropus_eugenii
ENSTNIG00000007441	sf3b2	100	61.066	ENSODEG00000017764	SF3B2	97	62.049	Octodon_degus
ENSTNIG00000007441	sf3b2	100	78.049	ENSONIG00000013068	sf3b2	100	75.290	Oreochromis_niloticus
ENSTNIG00000007441	sf3b2	88	66.622	ENSOANG00000012482	SF3B2	98	67.371	Ornithorhynchus_anatinus
ENSTNIG00000007441	sf3b2	63	48.204	ENSOCUG00000024154	-	99	48.015	Oryctolagus_cuniculus
ENSTNIG00000007441	sf3b2	99	65.434	ENSOCUG00000015722	-	91	70.077	Oryctolagus_cuniculus
ENSTNIG00000007441	sf3b2	100	76.230	ENSORLG00000008235	sf3b2	86	77.984	Oryzias_latipes
ENSTNIG00000007441	sf3b2	100	76.230	ENSORLG00020005357	sf3b2	88	77.984	Oryzias_latipes_hni
ENSTNIG00000007441	sf3b2	100	76.464	ENSORLG00015022454	sf3b2	91	75.348	Oryzias_latipes_hsok
ENSTNIG00000007441	sf3b2	100	74.266	ENSOMEG00000017480	sf3b2	89	79.150	Oryzias_melastigma
ENSTNIG00000007441	sf3b2	66	82.149	ENSOGAG00000005799	SF3B2	60	84.644	Otolemur_garnettii
ENSTNIG00000007441	sf3b2	100	64.699	ENSOARG00000002125	SF3B2	99	72.446	Ovis_aries
ENSTNIG00000007441	sf3b2	85	70.889	ENSPPAG00000007359	SF3B2	86	69.481	Pan_paniscus
ENSTNIG00000007441	sf3b2	88	70.053	ENSPPRG00000013334	SF3B2	86	70.604	Panthera_pardus
ENSTNIG00000007441	sf3b2	88	70.053	ENSPTIG00000015022	SF3B2	86	70.604	Panthera_tigris_altaica
ENSTNIG00000007441	sf3b2	85	70.889	ENSPTRG00000003912	SF3B2	87	68.886	Pan_troglodytes
ENSTNIG00000007441	sf3b2	88	69.612	ENSPANG00000008593	SF3B2	89	70.077	Papio_anubis
ENSTNIG00000007441	sf3b2	100	72.506	ENSPKIG00000016576	sf3b2	95	73.691	Paramormyrops_kingsleyae
ENSTNIG00000007441	sf3b2	88	70.147	ENSPSIG00000003158	SF3B2	99	71.542	Pelodiscus_sinensis
ENSTNIG00000007441	sf3b2	100	67.494	ENSPMGG00000000819	sf3b2	90	82.857	Periophthalmus_magnuspinnatus
ENSTNIG00000007441	sf3b2	85	66.760	ENSPEMG00000015451	-	90	67.556	Peromyscus_maniculatus_bairdii
ENSTNIG00000007441	sf3b2	88	69.478	ENSPEMG00000015437	Sf3b2	86	70.288	Peromyscus_maniculatus_bairdii
ENSTNIG00000007441	sf3b2	88	68.651	ENSPCIG00000008381	SF3B2	89	70.443	Phascolarctos_cinereus
ENSTNIG00000007441	sf3b2	100	77.922	ENSPFOG00000002552	sf3b2	97	76.777	Poecilia_formosa
ENSTNIG00000007441	sf3b2	100	78.225	ENSPLAG00000001471	sf3b2	97	77.133	Poecilia_latipinna
ENSTNIG00000007441	sf3b2	100	77.896	ENSPMEG00000013180	sf3b2	97	76.750	Poecilia_mexicana
ENSTNIG00000007441	sf3b2	100	76.331	ENSPREG00000002665	sf3b2	86	78.912	Poecilia_reticulata
ENSTNIG00000007441	sf3b2	57	65.675	ENSPPYG00000003034	-	80	64.338	Pongo_abelii
ENSTNIG00000007441	sf3b2	85	71.063	ENSPCAG00000005129	SF3B2	86	68.846	Procavia_capensis
ENSTNIG00000007441	sf3b2	88	69.303	ENSPCOG00000025375	SF3B2	86	68.502	Propithecus_coquereli
ENSTNIG00000007441	sf3b2	53	91.667	ENSPVAG00000005466	-	81	91.667	Pteropus_vampyrus
ENSTNIG00000007441	sf3b2	89	80.000	ENSPNYG00000023594	sf3b2	97	76.934	Pundamilia_nyererei
ENSTNIG00000007441	sf3b2	89	74.648	ENSPNAG00000001891	sf3b2	87	75.357	Pygocentrus_nattereri
ENSTNIG00000007441	sf3b2	88	68.675	ENSRNOG00000020412	Sf3b2	86	70.026	Rattus_norvegicus
ENSTNIG00000007441	sf3b2	88	69.612	ENSRBIG00000034065	SF3B2	86	68.798	Rhinopithecus_bieti
ENSTNIG00000007441	sf3b2	88	69.612	ENSRROG00000034496	SF3B2	86	68.798	Rhinopithecus_roxellana
ENSTNIG00000007441	sf3b2	100	64.245	ENSSBOG00000026337	SF3B2	97	63.341	Saimiri_boliviensis_boliviensis
ENSTNIG00000007441	sf3b2	99	54.854	ENSSHAG00000018043	-	88	59.085	Sarcophilus_harrisii
ENSTNIG00000007441	sf3b2	74	73.186	ENSSHAG00000010933	-	86	67.568	Sarcophilus_harrisii
ENSTNIG00000007441	sf3b2	100	71.821	ENSSFOG00015021125	sf3b2	87	75.683	Scleropages_formosus
ENSTNIG00000007441	sf3b2	100	77.984	ENSSMAG00000004079	sf3b2	94	78.522	Scophthalmus_maximus
ENSTNIG00000007441	sf3b2	100	75.708	ENSSDUG00000008499	sf3b2	87	78.486	Seriola_dumerili
ENSTNIG00000007441	sf3b2	93	91.379	ENSSLDG00000006838	sf3b2	87	91.841	Seriola_lalandi_dorsalis
ENSTNIG00000007441	sf3b2	74	78.254	ENSSPUG00000009198	SF3B2	85	72.267	Sphenodon_punctatus
ENSTNIG00000007441	sf3b2	85	70.985	ENSSSCG00000012957	SF3B2	86	68.886	Sus_scrofa
ENSTNIG00000007441	sf3b2	100	71.463	ENSTRUG00000007611	sf3b2	98	90.698	Takifugu_rubripes
ENSTNIG00000007441	sf3b2	74	88.028	ENSTBEG00000004258	SF3B2	78	88.028	Tupaia_belangeri
ENSTNIG00000007441	sf3b2	85	71.467	ENSTTRG00000014339	SF3B2	86	70.513	Tursiops_truncatus
ENSTNIG00000007441	sf3b2	82	70.833	ENSUAMG00000020754	SF3B2	83	68.156	Ursus_americanus
ENSTNIG00000007441	sf3b2	85	71.332	ENSUMAG00000010994	SF3B2	86	70.513	Ursus_maritimus
ENSTNIG00000007441	sf3b2	58	85.833	ENSVPAG00000008695	SF3B2	64	85.833	Vicugna_pacos
ENSTNIG00000007441	sf3b2	85	71.467	ENSVVUG00000027029	SF3B2	86	69.872	Vulpes_vulpes
ENSTNIG00000007441	sf3b2	92	63.659	ENSXETG00000008422	sf3b2	98	66.150	Xenopus_tropicalis
ENSTNIG00000007441	sf3b2	89	73.517	ENSXCOG00000008943	sf3b2	92	74.895	Xiphophorus_couchianus
ENSTNIG00000007441	sf3b2	100	76.914	ENSXMAG00000008467	sf3b2	97	75.943	Xiphophorus_maculatus