EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000007464 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 23736 bases
Position: chr17:10891829-10915564
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010272	S1	PF00575.23	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010453	-	3066	-	ENSTNIP00000010272	1022 (aa)	-	H3CPT9

Gene Model

Click here to download ENSTNIG00000007464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007464	si:ch211-117n7.8	99	49.902	ENSG00000068784	SRBD1	99	50.245	Homo_sapiens
ENSTNIG00000007464	si:ch211-117n7.8	98	74.114	ENSAPOG00000005103	si:ch211-117n7.8	98	74.213	Acanthochromis_polyacanthus
ENSTNIG00000007464	si:ch211-117n7.8	97	51.308	ENSAMEG00000005993	SRBD1	99	50.684	Ailuropoda_melanoleuca
ENSTNIG00000007464	si:ch211-117n7.8	97	72.195	ENSACIG00000009875	si:ch211-117n7.8	99	72.393	Amphilophus_citrinellus
ENSTNIG00000007464	si:ch211-117n7.8	98	73.518	ENSAOCG00000024718	si:ch211-117n7.8	98	73.715	Amphiprion_ocellaris
ENSTNIG00000007464	si:ch211-117n7.8	97	72.592	ENSAPEG00000002645	si:ch211-117n7.8	99	72.592	Amphiprion_percula
ENSTNIG00000007464	si:ch211-117n7.8	98	72.485	ENSATEG00000010844	si:ch211-117n7.8	98	72.808	Anabas_testudineus
ENSTNIG00000007464	si:ch211-117n7.8	82	57.193	ENSAPLG00000006313	SRBD1	98	51.282	Anas_platyrhynchos
ENSTNIG00000007464	si:ch211-117n7.8	97	50.200	ENSANAG00000025573	SRBD1	99	50.000	Aotus_nancymaae
ENSTNIG00000007464	si:ch211-117n7.8	98	73.772	ENSACLG00000024219	si:ch211-117n7.8	98	74.263	Astatotilapia_calliptera
ENSTNIG00000007464	si:ch211-117n7.8	84	67.133	ENSAMXG00000004294	SRBD1	97	61.368	Astyanax_mexicanus
ENSTNIG00000007464	si:ch211-117n7.8	99	50.049	ENSBTAG00000007508	SRBD1	99	48.532	Bos_taurus
ENSTNIG00000007464	si:ch211-117n7.8	99	49.219	ENSCJAG00000000727	SRBD1	99	49.708	Callithrix_jacchus
ENSTNIG00000007464	si:ch211-117n7.8	97	51.008	ENSCAFG00000002554	SRBD1	99	50.391	Canis_familiaris
ENSTNIG00000007464	si:ch211-117n7.8	97	48.234	ENSCAFG00020026284	SRBD1	100	55.149	Canis_lupus_dingo
ENSTNIG00000007464	si:ch211-117n7.8	99	50.245	ENSCHIG00000016535	SRBD1	98	50.735	Capra_hircus
ENSTNIG00000007464	si:ch211-117n7.8	99	50.244	ENSTSYG00000012797	SRBD1	99	50.586	Carlito_syrichta
ENSTNIG00000007464	si:ch211-117n7.8	99	49.854	ENSCPOG00000004773	SRBD1	99	49.854	Cavia_porcellus
ENSTNIG00000007464	si:ch211-117n7.8	97	50.300	ENSCCAG00000025589	SRBD1	99	50.097	Cebus_capucinus
ENSTNIG00000007464	si:ch211-117n7.8	97	51.004	ENSCATG00000039530	SRBD1	99	50.633	Cercocebus_atys
ENSTNIG00000007464	si:ch211-117n7.8	99	50.387	ENSCLAG00000008623	SRBD1	99	50.387	Chinchilla_lanigera
ENSTNIG00000007464	si:ch211-117n7.8	94	51.897	ENSCSAG00000013350	SRBD1	99	50.678	Chlorocebus_sabaeus
ENSTNIG00000007464	si:ch211-117n7.8	72	74.419	ENSCHOG00000003805	SRBD1	76	74.419	Choloepus_hoffmanni
ENSTNIG00000007464	si:ch211-117n7.8	96	52.589	ENSCPBG00000005677	SRBD1	98	52.778	Chrysemys_picta_bellii
ENSTNIG00000007464	si:ch211-117n7.8	78	40.691	ENSCING00000005950	-	99	40.691	Ciona_intestinalis
ENSTNIG00000007464	si:ch211-117n7.8	78	42.643	ENSCSAVG00000000861	-	99	42.643	Ciona_savignyi
ENSTNIG00000007464	si:ch211-117n7.8	97	50.501	ENSCANG00000016307	SRBD1	99	50.049	Colobus_angolensis_palliatus
ENSTNIG00000007464	si:ch211-117n7.8	99	49.657	ENSCGRG00001000513	Srbd1	99	49.657	Cricetulus_griseus_chok1gshd
ENSTNIG00000007464	si:ch211-117n7.8	99	49.657	ENSCGRG00000002283	Srbd1	99	49.657	Cricetulus_griseus_crigri
ENSTNIG00000007464	si:ch211-117n7.8	99	66.602	ENSCSEG00000000856	si:ch211-117n7.8	99	66.892	Cynoglossus_semilaevis
ENSTNIG00000007464	si:ch211-117n7.8	85	77.445	ENSCVAG00000020212	si:ch211-117n7.8	99	70.359	Cyprinodon_variegatus
ENSTNIG00000007464	si:ch211-117n7.8	97	50.200	ENSDNOG00000018686	SRBD1	99	49.659	Dasypus_novemcinctus
ENSTNIG00000007464	si:ch211-117n7.8	99	50.195	ENSDORG00000010468	Srbd1	99	50.195	Dipodomys_ordii
ENSTNIG00000007464	si:ch211-117n7.8	78	34.820	FBgn0051156	CG31156	79	34.820	Drosophila_melanogaster
ENSTNIG00000007464	si:ch211-117n7.8	88	53.737	ENSETEG00000000739	SRBD1	92	54.578	Echinops_telfairi
ENSTNIG00000007464	si:ch211-117n7.8	72	47.956	ENSEBUG00000008902	si:ch211-117n7.8	95	47.956	Eptatretus_burgeri
ENSTNIG00000007464	si:ch211-117n7.8	97	49.245	ENSEASG00005003132	SRBD1	99	53.125	Equus_asinus_asinus
ENSTNIG00000007464	si:ch211-117n7.8	97	51.259	ENSECAG00000013865	SRBD1	98	50.781	Equus_caballus
ENSTNIG00000007464	si:ch211-117n7.8	84	69.626	ENSELUG00000012592	si:ch211-117n7.8	97	61.322	Esox_lucius
ENSTNIG00000007464	si:ch211-117n7.8	97	51.357	ENSFCAG00000005101	SRBD1	99	50.877	Felis_catus
ENSTNIG00000007464	si:ch211-117n7.8	84	55.336	ENSFALG00000012966	SRBD1	98	50.245	Ficedula_albicollis
ENSTNIG00000007464	si:ch211-117n7.8	98	50.549	ENSFDAG00000016670	SRBD1	99	50.549	Fukomys_damarensis
ENSTNIG00000007464	si:ch211-117n7.8	98	72.178	ENSFHEG00000019480	si:ch211-117n7.8	97	72.178	Fundulus_heteroclitus
ENSTNIG00000007464	si:ch211-117n7.8	50	66.972	ENSGMOG00000018010	-	100	66.972	Gadus_morhua
ENSTNIG00000007464	si:ch211-117n7.8	96	52.073	ENSGALG00000009990	SRBD1	98	52.024	Gallus_gallus
ENSTNIG00000007464	si:ch211-117n7.8	98	71.655	ENSGAFG00000019664	si:ch211-117n7.8	97	72.178	Gambusia_affinis
ENSTNIG00000007464	si:ch211-117n7.8	62	79.875	ENSGACG00000010794	si:ch211-117n7.8	100	79.875	Gasterosteus_aculeatus
ENSTNIG00000007464	si:ch211-117n7.8	88	53.879	ENSGAGG00000006166	SRBD1	99	57.344	Gopherus_agassizii
ENSTNIG00000007464	si:ch211-117n7.8	98	51.049	ENSGGOG00000005910	SRBD1	100	51.205	Gorilla_gorilla
ENSTNIG00000007464	si:ch211-117n7.8	97	62.724	ENSHBUG00000013207	si:ch211-117n7.8	99	63.320	Haplochromis_burtoni
ENSTNIG00000007464	si:ch211-117n7.8	99	49.854	ENSHGLG00000018153	-	99	49.854	Heterocephalus_glaber_female
ENSTNIG00000007464	si:ch211-117n7.8	99	50.243	ENSHGLG00100015183	-	99	50.243	Heterocephalus_glaber_male
ENSTNIG00000007464	si:ch211-117n7.8	84	66.550	ENSIPUG00000009661	srbd1	97	61.066	Ictalurus_punctatus
ENSTNIG00000007464	si:ch211-117n7.8	99	50.196	ENSSTOG00000005898	SRBD1	99	50.196	Ictidomys_tridecemlineatus
ENSTNIG00000007464	si:ch211-117n7.8	99	48.109	ENSJJAG00000022244	Srbd1	99	48.109	Jaculus_jaculus
ENSTNIG00000007464	si:ch211-117n7.8	98	74.038	ENSKMAG00000003473	si:ch211-117n7.8	98	74.038	Kryptolebias_marmoratus
ENSTNIG00000007464	si:ch211-117n7.8	98	73.715	ENSLBEG00000027518	si:ch211-117n7.8	98	73.715	Labrus_bergylta
ENSTNIG00000007464	si:ch211-117n7.8	83	56.709	ENSLACG00000009790	SRBD1	99	56.709	Latimeria_chalumnae
ENSTNIG00000007464	si:ch211-117n7.8	84	65.192	ENSLOCG00000016360	si:ch211-117n7.8	97	59.658	Lepisosteus_oculatus
ENSTNIG00000007464	si:ch211-117n7.8	97	50.602	ENSMFAG00000042026	SRBD1	99	50.243	Macaca_fascicularis
ENSTNIG00000007464	si:ch211-117n7.8	97	50.602	ENSMMUG00000003490	SRBD1	99	50.243	Macaca_mulatta
ENSTNIG00000007464	si:ch211-117n7.8	97	49.349	ENSMNEG00000034701	SRBD1	99	49.029	Macaca_nemestrina
ENSTNIG00000007464	si:ch211-117n7.8	97	50.602	ENSMLEG00000000745	SRBD1	99	50.243	Mandrillus_leucophaeus
ENSTNIG00000007464	si:ch211-117n7.8	98	73.990	ENSMAMG00000021921	si:ch211-117n7.8	98	74.187	Mastacembelus_armatus
ENSTNIG00000007464	si:ch211-117n7.8	98	73.772	ENSMZEG00005027369	si:ch211-117n7.8	98	74.361	Maylandia_zebra
ENSTNIG00000007464	si:ch211-117n7.8	79	55.405	ENSMGAG00000010273	SRBD1	99	55.405	Meleagris_gallopavo
ENSTNIG00000007464	si:ch211-117n7.8	77	54.756	ENSMAUG00000013916	Srbd1	95	54.756	Mesocricetus_auratus
ENSTNIG00000007464	si:ch211-117n7.8	99	50.487	ENSMICG00000007835	SRBD1	99	50.828	Microcebus_murinus
ENSTNIG00000007464	si:ch211-117n7.8	98	50.742	ENSMOCG00000018716	Srbd1	98	50.742	Microtus_ochrogaster
ENSTNIG00000007464	si:ch211-117n7.8	97	72.289	ENSMMOG00000007507	si:ch211-117n7.8	99	72.289	Mola_mola
ENSTNIG00000007464	si:ch211-117n7.8	98	74.089	ENSMALG00000001562	si:ch211-117n7.8	98	74.286	Monopterus_albus
ENSTNIG00000007464	si:ch211-117n7.8	97	50.754	MGP_CAROLIEiJ_G0021934	Srbd1	99	57.051	Mus_caroli
ENSTNIG00000007464	si:ch211-117n7.8	97	50.745	ENSMUSG00000024135	Srbd1	100	51.877	Mus_musculus
ENSTNIG00000007464	si:ch211-117n7.8	97	50.945	MGP_PahariEiJ_G0020924	Srbd1	98	50.945	Mus_pahari
ENSTNIG00000007464	si:ch211-117n7.8	97	50.745	MGP_SPRETEiJ_G0022850	Srbd1	98	50.745	Mus_spretus
ENSTNIG00000007464	si:ch211-117n7.8	97	51.195	ENSMLUG00000007039	SRBD1	99	50.628	Myotis_lucifugus
ENSTNIG00000007464	si:ch211-117n7.8	99	48.476	ENSNGAG00000011893	Srbd1	99	48.476	Nannospalax_galili
ENSTNIG00000007464	si:ch211-117n7.8	98	70.079	ENSNBRG00000012873	si:ch211-117n7.8	99	70.669	Neolamprologus_brichardi
ENSTNIG00000007464	si:ch211-117n7.8	97	50.808	ENSNLEG00000016877	SRBD1	99	50.441	Nomascus_leucogenys
ENSTNIG00000007464	si:ch211-117n7.8	99	49.314	ENSODEG00000012095	SRBD1	99	49.314	Octodon_degus
ENSTNIG00000007464	si:ch211-117n7.8	98	74.165	ENSONIG00000000945	si:ch211-117n7.8	100	81.221	Oreochromis_niloticus
ENSTNIG00000007464	si:ch211-117n7.8	99	50.193	ENSOCUG00000015385	SRBD1	99	50.290	Oryctolagus_cuniculus
ENSTNIG00000007464	si:ch211-117n7.8	98	66.567	ENSORLG00000004427	si:ch211-117n7.8	97	66.567	Oryzias_latipes
ENSTNIG00000007464	si:ch211-117n7.8	98	69.574	ENSORLG00020012792	si:ch211-117n7.8	97	69.574	Oryzias_latipes_hni
ENSTNIG00000007464	si:ch211-117n7.8	98	69.643	ENSORLG00015018598	si:ch211-117n7.8	97	69.643	Oryzias_latipes_hsok
ENSTNIG00000007464	si:ch211-117n7.8	98	67.815	ENSOMEG00000012229	si:ch211-117n7.8	97	72.527	Oryzias_melastigma
ENSTNIG00000007464	si:ch211-117n7.8	99	48.874	ENSOGAG00000001076	SRBD1	99	49.070	Otolemur_garnettii
ENSTNIG00000007464	si:ch211-117n7.8	99	47.159	ENSOARG00000005958	SRBD1	99	47.633	Ovis_aries
ENSTNIG00000007464	si:ch211-117n7.8	99	50.000	ENSPPAG00000038442	SRBD1	99	50.245	Pan_paniscus
ENSTNIG00000007464	si:ch211-117n7.8	97	50.706	ENSPPRG00000003449	SRBD1	99	50.244	Panthera_pardus
ENSTNIG00000007464	si:ch211-117n7.8	97	50.706	ENSPTIG00000012495	SRBD1	99	50.244	Panthera_tigris_altaica
ENSTNIG00000007464	si:ch211-117n7.8	99	50.000	ENSPTRG00000011889	SRBD1	99	50.245	Pan_troglodytes
ENSTNIG00000007464	si:ch211-117n7.8	97	50.602	ENSPANG00000008063	SRBD1	99	50.243	Papio_anubis
ENSTNIG00000007464	si:ch211-117n7.8	96	60.812	ENSPKIG00000021973	si:ch211-117n7.8	99	60.178	Paramormyrops_kingsleyae
ENSTNIG00000007464	si:ch211-117n7.8	93	52.500	ENSPSIG00000008992	SRBD1	98	51.443	Pelodiscus_sinensis
ENSTNIG00000007464	si:ch211-117n7.8	98	70.268	ENSPMGG00000013348	si:ch211-117n7.8	99	70.437	Periophthalmus_magnuspinnatus
ENSTNIG00000007464	si:ch211-117n7.8	99	48.430	ENSPEMG00000020684	Srbd1	99	48.430	Peromyscus_maniculatus_bairdii
ENSTNIG00000007464	si:ch211-117n7.8	98	72.475	ENSPFOG00000010650	si:ch211-117n7.8	98	72.475	Poecilia_formosa
ENSTNIG00000007464	si:ch211-117n7.8	98	72.673	ENSPLAG00000002141	si:ch211-117n7.8	98	72.673	Poecilia_latipinna
ENSTNIG00000007464	si:ch211-117n7.8	98	72.574	ENSPMEG00000018537	si:ch211-117n7.8	98	72.574	Poecilia_mexicana
ENSTNIG00000007464	si:ch211-117n7.8	97	72.864	ENSPREG00000003258	si:ch211-117n7.8	97	72.864	Poecilia_reticulata
ENSTNIG00000007464	si:ch211-117n7.8	99	45.051	ENSPPYG00000012444	SRBD1	98	45.379	Pongo_abelii
ENSTNIG00000007464	si:ch211-117n7.8	75	49.547	ENSPCAG00000005629	SRBD1	80	49.547	Procavia_capensis
ENSTNIG00000007464	si:ch211-117n7.8	99	42.580	ENSPCOG00000017669	SRBD1	99	43.092	Propithecus_coquereli
ENSTNIG00000007464	si:ch211-117n7.8	94	45.557	ENSPVAG00000001782	SRBD1	99	44.595	Pteropus_vampyrus
ENSTNIG00000007464	si:ch211-117n7.8	97	68.825	ENSPNYG00000000508	si:ch211-117n7.8	99	69.422	Pundamilia_nyererei
ENSTNIG00000007464	si:ch211-117n7.8	96	62.857	ENSPNAG00000013492	SRBD1	97	63.280	Pygocentrus_nattereri
ENSTNIG00000007464	si:ch211-117n7.8	97	49.800	ENSRNOG00000014720	Srbd1	97	49.950	Rattus_norvegicus
ENSTNIG00000007464	si:ch211-117n7.8	99	49.610	ENSRBIG00000033486	SRBD1	99	49.708	Rhinopithecus_bieti
ENSTNIG00000007464	si:ch211-117n7.8	99	49.610	ENSRROG00000041599	SRBD1	99	49.708	Rhinopithecus_roxellana
ENSTNIG00000007464	si:ch211-117n7.8	97	50.301	ENSSBOG00000024982	SRBD1	99	49.951	Saimiri_boliviensis_boliviensis
ENSTNIG00000007464	si:ch211-117n7.8	82	66.429	ENSSFOG00015001128	si:ch211-117n7.8	89	66.429	Scleropages_formosus
ENSTNIG00000007464	si:ch211-117n7.8	98	73.529	ENSSMAG00000018256	si:ch211-117n7.8	98	73.529	Scophthalmus_maximus
ENSTNIG00000007464	si:ch211-117n7.8	93	74.745	ENSSLDG00000023189	si:ch211-117n7.8	99	73.587	Seriola_lalandi_dorsalis
ENSTNIG00000007464	si:ch211-117n7.8	95	48.152	ENSSARG00000009740	SRBD1	98	47.676	Sorex_araneus
ENSTNIG00000007464	si:ch211-117n7.8	85	56.286	ENSSPUG00000010475	SRBD1	98	55.011	Sphenodon_punctatus
ENSTNIG00000007464	si:ch211-117n7.8	92	71.504	ENSSPAG00000008092	-	99	69.951	Stegastes_partitus
ENSTNIG00000007464	si:ch211-117n7.8	99	50.147	ENSSSCG00000008445	SRBD1	98	50.440	Sus_scrofa
ENSTNIG00000007464	si:ch211-117n7.8	83	56.302	ENSTGUG00000003878	SRBD1	100	56.302	Taeniopygia_guttata
ENSTNIG00000007464	si:ch211-117n7.8	98	79.941	ENSTRUG00000007080	si:ch211-117n7.8	99	82.096	Takifugu_rubripes
ENSTNIG00000007464	si:ch211-117n7.8	64	78.947	ENSTBEG00000004556	SRBD1	69	78.947	Tupaia_belangeri
ENSTNIG00000007464	si:ch211-117n7.8	92	55.155	ENSTTRG00000011871	SRBD1	91	55.155	Tursiops_truncatus
ENSTNIG00000007464	si:ch211-117n7.8	97	51.303	ENSUAMG00000008126	SRBD1	97	54.710	Ursus_americanus
ENSTNIG00000007464	si:ch211-117n7.8	97	51.303	ENSUMAG00000012902	SRBD1	98	50.681	Ursus_maritimus
ENSTNIG00000007464	si:ch211-117n7.8	89	52.574	ENSVPAG00000006825	SRBD1	98	52.574	Vicugna_pacos
ENSTNIG00000007464	si:ch211-117n7.8	99	50.244	ENSVVUG00000005389	SRBD1	99	50.537	Vulpes_vulpes
ENSTNIG00000007464	si:ch211-117n7.8	98	43.679	ENSXETG00000002760	srbd1	98	44.359	Xenopus_tropicalis
ENSTNIG00000007464	si:ch211-117n7.8	98	72.871	ENSXMAG00000016861	si:ch211-117n7.8	98	72.871	Xiphophorus_maculatus