EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000007585 (Gene tree)
Gene ID: -
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger%2C C3HC-type containing 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3182 bases
Position: chr19:3405307-3408488
Accession: ZDB-GENE-061013-94
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010398	zf-C3HC	PF07967.13	2e-31	1	1
ENSTNIP00000003153	zf-C3HC	PF07967.13	4.8e-31	1	1
ENSTNIP00000003153	Rsm1	PF08600.10	5e-14	1	1
ENSTNIP00000010398	Rsm1	PF08600.10	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000216	-	1482	-	ENSTNIP00000003153	493 (aa)	-	H3C4I4
ENSTNIT00000010579	-	1404	-	ENSTNIP00000010398	468 (aa)	-	H3CQ64

Gene Model

Click here to download ENSTNIG00000007585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007585	zc3hc1	100	43.763	ENSG00000091732	ZC3HC1	93	47.516	Homo_sapiens
ENSTNIG00000007585	zc3hc1	99	68.987	ENSAPOG00000009078	zc3hc1	99	68.526	Acanthochromis_polyacanthus
ENSTNIG00000007585	zc3hc1	99	43.673	ENSAMEG00000005425	ZC3HC1	94	43.648	Ailuropoda_melanoleuca
ENSTNIG00000007585	zc3hc1	99	67.227	ENSACIG00000019513	zc3hc1	99	66.800	Amphilophus_citrinellus
ENSTNIG00000007585	zc3hc1	99	68.354	ENSAOCG00000024310	zc3hc1	99	67.928	Amphiprion_ocellaris
ENSTNIG00000007585	zc3hc1	99	68.354	ENSAPEG00000004907	zc3hc1	99	67.331	Amphiprion_percula
ENSTNIG00000007585	zc3hc1	90	70.998	ENSATEG00000016898	zc3hc1	89	70.998	Anabas_testudineus
ENSTNIG00000007585	zc3hc1	90	43.707	ENSAPLG00000003832	ZC3HC1	96	43.707	Anas_platyrhynchos
ENSTNIG00000007585	zc3hc1	99	44.672	ENSACAG00000001638	ZC3HC1	95	44.668	Anolis_carolinensis
ENSTNIG00000007585	zc3hc1	99	42.828	ENSANAG00000022213	ZC3HC1	93	47.385	Aotus_nancymaae
ENSTNIG00000007585	zc3hc1	95	69.978	ENSACLG00000025033	zc3hc1	99	70.460	Astatotilapia_calliptera
ENSTNIG00000007585	zc3hc1	98	50.108	ENSAMXG00000036792	zc3hc1	99	49.167	Astyanax_mexicanus
ENSTNIG00000007585	zc3hc1	99	43.354	ENSBTAG00000011247	ZC3HC1	94	43.532	Bos_taurus
ENSTNIG00000007585	zc3hc1	99	43.149	ENSCJAG00000010536	ZC3HC1	93	48.923	Callithrix_jacchus
ENSTNIG00000007585	zc3hc1	99	42.710	ENSCAFG00000031850	-	95	42.623	Canis_familiaris
ENSTNIG00000007585	zc3hc1	99	42.300	ENSCAFG00000028735	-	95	42.213	Canis_familiaris
ENSTNIG00000007585	zc3hc1	99	42.505	ENSCAFG00000029401	-	93	42.268	Canis_familiaris
ENSTNIG00000007585	zc3hc1	99	42.653	ENSCAFG00000001499	-	93	42.623	Canis_familiaris
ENSTNIG00000007585	zc3hc1	99	42.505	ENSCAFG00020006829	-	95	42.418	Canis_lupus_dingo
ENSTNIG00000007585	zc3hc1	99	42.127	ENSCAFG00020023333	-	93	45.538	Canis_lupus_dingo
ENSTNIG00000007585	zc3hc1	99	38.809	ENSCHIG00000014103	ZC3HC1	94	38.809	Capra_hircus
ENSTNIG00000007585	zc3hc1	99	42.536	ENSTSYG00000002843	ZC3HC1	92	45.370	Carlito_syrichta
ENSTNIG00000007585	zc3hc1	92	38.542	ENSCAPG00000016300	ZC3HC1	94	38.542	Cavia_aperea
ENSTNIG00000007585	zc3hc1	99	43.182	ENSCPOG00000014034	ZC3HC1	94	44.595	Cavia_porcellus
ENSTNIG00000007585	zc3hc1	99	33.333	ENSCCAG00000020384	ZC3HC1	99	38.912	Cebus_capucinus
ENSTNIG00000007585	zc3hc1	99	43.737	ENSCATG00000023130	ZC3HC1	93	47.692	Cercocebus_atys
ENSTNIG00000007585	zc3hc1	87	32.771	ENSCLAG00000008260	ZC3HC1	88	33.175	Chinchilla_lanigera
ENSTNIG00000007585	zc3hc1	79	41.344	ENSCSAG00000009881	ZC3HC1	99	41.299	Chlorocebus_sabaeus
ENSTNIG00000007585	zc3hc1	92	45.575	ENSCHOG00000011846	ZC3HC1	96	45.556	Choloepus_hoffmanni
ENSTNIG00000007585	zc3hc1	99	45.208	ENSCPBG00000017519	ZC3HC1	95	44.792	Chrysemys_picta_bellii
ENSTNIG00000007585	zc3hc1	99	43.943	ENSCANG00000029091	ZC3HC1	93	48.000	Colobus_angolensis_palliatus
ENSTNIG00000007585	zc3hc1	99	42.355	ENSCGRG00001018805	Zc3hc1	93	45.988	Cricetulus_griseus_chok1gshd
ENSTNIG00000007585	zc3hc1	99	41.736	ENSCGRG00000017114	Zc3hc1	95	41.273	Cricetulus_griseus_crigri
ENSTNIG00000007585	zc3hc1	99	65.828	ENSCSEG00000009284	zc3hc1	98	64.752	Cynoglossus_semilaevis
ENSTNIG00000007585	zc3hc1	99	64.331	ENSCVAG00000011566	zc3hc1	99	63.655	Cyprinodon_variegatus
ENSTNIG00000007585	zc3hc1	99	55.180	ENSDARG00000062651	zc3hc1	99	54.491	Danio_rerio
ENSTNIG00000007585	zc3hc1	99	42.653	ENSDNOG00000045016	ZC3HC1	95	42.596	Dasypus_novemcinctus
ENSTNIG00000007585	zc3hc1	90	45.538	ENSDORG00000008697	Zc3hc1	89	51.273	Dipodomys_ordii
ENSTNIG00000007585	zc3hc1	92	44.743	ENSEASG00005008789	ZC3HC1	93	44.944	Equus_asinus_asinus
ENSTNIG00000007585	zc3hc1	99	43.648	ENSECAG00000017886	ZC3HC1	95	43.558	Equus_caballus
ENSTNIG00000007585	zc3hc1	68	49.704	ENSEEUG00000003123	ZC3HC1	77	39.130	Erinaceus_europaeus
ENSTNIG00000007585	zc3hc1	99	55.533	ENSELUG00000023168	zc3hc1	100	56.615	Esox_lucius
ENSTNIG00000007585	zc3hc1	99	42.191	ENSFCAG00000010429	ZC3HC1	93	46.084	Felis_catus
ENSTNIG00000007585	zc3hc1	90	41.943	ENSFALG00000005006	ZC3HC1	95	41.921	Ficedula_albicollis
ENSTNIG00000007585	zc3hc1	99	43.033	ENSFDAG00000019897	ZC3HC1	95	43.558	Fukomys_damarensis
ENSTNIG00000007585	zc3hc1	99	64.000	ENSFHEG00000020149	zc3hc1	99	63.419	Fundulus_heteroclitus
ENSTNIG00000007585	zc3hc1	99	59.494	ENSGMOG00000002914	zc3hc1	99	59.073	Gadus_morhua
ENSTNIG00000007585	zc3hc1	99	41.736	ENSGALG00000008003	ZC3HC1	95	41.803	Gallus_gallus
ENSTNIG00000007585	zc3hc1	99	65.895	ENSGAFG00000016095	zc3hc1	99	65.010	Gambusia_affinis
ENSTNIG00000007585	zc3hc1	99	69.362	ENSGACG00000019706	zc3hc1	99	68.000	Gasterosteus_aculeatus
ENSTNIG00000007585	zc3hc1	81	43.367	ENSGAGG00000016106	ZC3HC1	100	45.088	Gopherus_agassizii
ENSTNIG00000007585	zc3hc1	100	43.967	ENSGGOG00000015504	ZC3HC1	93	47.826	Gorilla_gorilla
ENSTNIG00000007585	zc3hc1	99	69.979	ENSHBUG00000008347	zc3hc1	99	69.200	Haplochromis_burtoni
ENSTNIG00000007585	zc3hc1	99	42.300	ENSHGLG00000005085	ZC3HC1	94	42.796	Heterocephalus_glaber_female
ENSTNIG00000007585	zc3hc1	99	42.300	ENSHGLG00100011395	ZC3HC1	94	42.796	Heterocephalus_glaber_male
ENSTNIG00000007585	zc3hc1	99	62.527	ENSHCOG00000014309	zc3hc1	99	62.626	Hippocampus_comes
ENSTNIG00000007585	zc3hc1	99	41.189	ENSSTOG00000023599	-	97	41.468	Ictidomys_tridecemlineatus
ENSTNIG00000007585	zc3hc1	99	66.245	ENSKMAG00000015315	zc3hc1	93	65.070	Kryptolebias_marmoratus
ENSTNIG00000007585	zc3hc1	100	66.601	ENSLBEG00000017325	zc3hc1	99	66.601	Labrus_bergylta
ENSTNIG00000007585	zc3hc1	76	43.490	ENSLACG00000013032	ZC3HC1	94	43.424	Latimeria_chalumnae
ENSTNIG00000007585	zc3hc1	99	51.967	ENSLOCG00000015963	zc3hc1	95	52.664	Lepisosteus_oculatus
ENSTNIG00000007585	zc3hc1	99	40.404	ENSLAFG00000001292	ZC3HC1	95	41.331	Loxodonta_africana
ENSTNIG00000007585	zc3hc1	99	43.737	ENSMFAG00000030176	ZC3HC1	93	47.385	Macaca_fascicularis
ENSTNIG00000007585	zc3hc1	99	43.443	ENSMMUG00000006155	ZC3HC1	93	47.692	Macaca_mulatta
ENSTNIG00000007585	zc3hc1	99	43.737	ENSMNEG00000011833	ZC3HC1	93	47.692	Macaca_nemestrina
ENSTNIG00000007585	zc3hc1	99	43.737	ENSMLEG00000027328	ZC3HC1	93	47.692	Mandrillus_leucophaeus
ENSTNIG00000007585	zc3hc1	99	69.409	ENSMAMG00000010691	zc3hc1	99	69.062	Mastacembelus_armatus
ENSTNIG00000007585	zc3hc1	99	69.767	ENSMZEG00005007142	zc3hc1	99	69.000	Maylandia_zebra
ENSTNIG00000007585	zc3hc1	99	40.816	ENSMGAG00000002977	ZC3HC1	95	42.073	Meleagris_gallopavo
ENSTNIG00000007585	zc3hc1	91	39.910	ENSMAUG00000017032	Zc3hc1	97	40.135	Mesocricetus_auratus
ENSTNIG00000007585	zc3hc1	99	43.149	ENSMICG00000009167	ZC3HC1	93	47.853	Microcebus_murinus
ENSTNIG00000007585	zc3hc1	99	43.093	ENSMOCG00000015239	Zc3hc1	93	47.385	Microtus_ochrogaster
ENSTNIG00000007585	zc3hc1	91	70.776	ENSMMOG00000002204	zc3hc1	99	71.171	Mola_mola
ENSTNIG00000007585	zc3hc1	99	34.195	ENSMODG00000014630	ZC3HC1	95	34.055	Monodelphis_domestica
ENSTNIG00000007585	zc3hc1	98	69.379	ENSMALG00000014447	zc3hc1	99	67.928	Monopterus_albus
ENSTNIG00000007585	zc3hc1	99	42.236	MGP_CAROLIEiJ_G0028183	Zc3hc1	93	47.059	Mus_caroli
ENSTNIG00000007585	zc3hc1	99	41.736	ENSMUSG00000039130	Zc3hc1	93	46.914	Mus_musculus
ENSTNIG00000007585	zc3hc1	99	38.669	MGP_PahariEiJ_G0021941	Zc3hc1	92	41.358	Mus_pahari
ENSTNIG00000007585	zc3hc1	99	41.942	MGP_SPRETEiJ_G0029183	Zc3hc1	93	46.914	Mus_spretus
ENSTNIG00000007585	zc3hc1	94	42.424	ENSMPUG00000005297	ZC3HC1	89	42.549	Mustela_putorius_furo
ENSTNIG00000007585	zc3hc1	99	40.900	ENSMLUG00000000063	-	94	41.889	Myotis_lucifugus
ENSTNIG00000007585	zc3hc1	70	36.467	ENSMLUG00000029228	-	98	37.822	Myotis_lucifugus
ENSTNIG00000007585	zc3hc1	99	42.593	ENSNGAG00000019014	Zc3hc1	93	46.809	Nannospalax_galili
ENSTNIG00000007585	zc3hc1	99	69.280	ENSNBRG00000004577	zc3hc1	99	68.537	Neolamprologus_brichardi
ENSTNIG00000007585	zc3hc1	100	43.967	ENSNLEG00000012698	ZC3HC1	97	42.133	Nomascus_leucogenys
ENSTNIG00000007585	zc3hc1	99	43.326	ENSMEUG00000011023	ZC3HC1	95	43.354	Notamacropus_eugenii
ENSTNIG00000007585	zc3hc1	99	40.283	ENSODEG00000014604	ZC3HC1	94	44.377	Octodon_degus
ENSTNIG00000007585	zc3hc1	99	69.767	ENSONIG00000011644	zc3hc1	99	69.200	Oreochromis_niloticus
ENSTNIG00000007585	zc3hc1	91	39.606	ENSOANG00000011460	ZC3HC1	96	39.913	Ornithorhynchus_anatinus
ENSTNIG00000007585	zc3hc1	99	42.510	ENSOCUG00000017137	ZC3HC1	95	43.061	Oryctolagus_cuniculus
ENSTNIG00000007585	zc3hc1	99	67.024	ENSORLG00000014409	zc3hc1	98	65.795	Oryzias_latipes
ENSTNIG00000007585	zc3hc1	99	67.452	ENSORLG00020015874	zc3hc1	98	66.197	Oryzias_latipes_hni
ENSTNIG00000007585	zc3hc1	99	66.809	ENSORLG00015014641	zc3hc1	98	65.392	Oryzias_latipes_hsok
ENSTNIG00000007585	zc3hc1	99	65.880	ENSOMEG00000020604	zc3hc1	99	65.191	Oryzias_melastigma
ENSTNIG00000007585	zc3hc1	99	66.161	ENSOMEG00000000215	zc3hc1	99	65.447	Oryzias_melastigma
ENSTNIG00000007585	zc3hc1	99	38.163	ENSOGAG00000026193	ZC3HC1	97	37.795	Otolemur_garnettii
ENSTNIG00000007585	zc3hc1	99	41.718	ENSOARG00000004907	ZC3HC1	93	42.740	Ovis_aries
ENSTNIG00000007585	zc3hc1	100	43.763	ENSPPAG00000043172	ZC3HC1	93	47.516	Pan_paniscus
ENSTNIG00000007585	zc3hc1	99	41.903	ENSPPRG00000001004	ZC3HC1	93	45.566	Panthera_pardus
ENSTNIG00000007585	zc3hc1	99	42.394	ENSPTIG00000007823	ZC3HC1	93	46.084	Panthera_tigris_altaica
ENSTNIG00000007585	zc3hc1	100	43.763	ENSPTRG00000019685	ZC3HC1	93	47.516	Pan_troglodytes
ENSTNIG00000007585	zc3hc1	99	43.033	ENSPANG00000014229	ZC3HC1	93	47.692	Papio_anubis
ENSTNIG00000007585	zc3hc1	99	50.734	ENSPKIG00000007172	zc3hc1	99	49.803	Paramormyrops_kingsleyae
ENSTNIG00000007585	zc3hc1	93	41.758	ENSPSIG00000016646	ZC3HC1	90	42.117	Pelodiscus_sinensis
ENSTNIG00000007585	zc3hc1	95	62.418	ENSPMGG00000003548	zc3hc1	95	61.042	Periophthalmus_magnuspinnatus
ENSTNIG00000007585	zc3hc1	99	40.664	ENSPEMG00000000514	Zc3hc1	93	45.988	Peromyscus_maniculatus_bairdii
ENSTNIG00000007585	zc3hc1	99	41.564	ENSPCIG00000020619	ZC3HC1	100	43.216	Phascolarctos_cinereus
ENSTNIG00000007585	zc3hc1	99	65.678	ENSPFOG00000003466	zc3hc1	99	64.800	Poecilia_formosa
ENSTNIG00000007585	zc3hc1	99	65.466	ENSPLAG00000022211	zc3hc1	99	64.600	Poecilia_latipinna
ENSTNIG00000007585	zc3hc1	99	65.678	ENSPMEG00000001458	zc3hc1	99	64.800	Poecilia_mexicana
ENSTNIG00000007585	zc3hc1	99	66.102	ENSPREG00000004004	zc3hc1	99	65.200	Poecilia_reticulata
ENSTNIG00000007585	zc3hc1	100	41.548	ENSPPYG00000017998	ZC3HC1	95	41.513	Pongo_abelii
ENSTNIG00000007585	zc3hc1	92	43.177	ENSPCAG00000001182	ZC3HC1	95	43.556	Procavia_capensis
ENSTNIG00000007585	zc3hc1	99	42.593	ENSPCOG00000017354	ZC3HC1	94	43.784	Propithecus_coquereli
ENSTNIG00000007585	zc3hc1	99	40.956	ENSPVAG00000003195	ZC3HC1	94	41.372	Pteropus_vampyrus
ENSTNIG00000007585	zc3hc1	99	69.767	ENSPNYG00000020692	zc3hc1	99	69.000	Pundamilia_nyererei
ENSTNIG00000007585	zc3hc1	98	50.535	ENSPNAG00000020746	zc3hc1	96	50.210	Pygocentrus_nattereri
ENSTNIG00000007585	zc3hc1	99	41.273	ENSRNOG00000010154	Zc3hc1	95	41.104	Rattus_norvegicus
ENSTNIG00000007585	zc3hc1	92	45.536	ENSRBIG00000029409	ZC3HC1	95	51.049	Rhinopithecus_bieti
ENSTNIG00000007585	zc3hc1	99	43.943	ENSRROG00000041831	ZC3HC1	93	48.000	Rhinopithecus_roxellana
ENSTNIG00000007585	zc3hc1	81	52.294	ENSSBOG00000032787	ZC3HC1	93	52.294	Saimiri_boliviensis_boliviensis
ENSTNIG00000007585	zc3hc1	92	44.196	ENSSHAG00000002529	ZC3HC1	94	43.946	Sarcophilus_harrisii
ENSTNIG00000007585	zc3hc1	99	53.766	ENSSFOG00015003667	zc3hc1	95	53.057	Scleropages_formosus
ENSTNIG00000007585	zc3hc1	99	69.362	ENSSMAG00000000647	zc3hc1	90	68.000	Scophthalmus_maximus
ENSTNIG00000007585	zc3hc1	99	71.882	ENSSDUG00000004241	zc3hc1	97	71.000	Seriola_dumerili
ENSTNIG00000007585	zc3hc1	99	71.670	ENSSLDG00000025056	zc3hc1	97	70.800	Seriola_lalandi_dorsalis
ENSTNIG00000007585	zc3hc1	99	38.086	ENSSARG00000012013	ZC3HC1	95	39.351	Sorex_araneus
ENSTNIG00000007585	zc3hc1	85	42.344	ENSSPUG00000000778	ZC3HC1	80	42.548	Sphenodon_punctatus
ENSTNIG00000007585	zc3hc1	99	69.831	ENSSPAG00000020041	zc3hc1	99	69.323	Stegastes_partitus
ENSTNIG00000007585	zc3hc1	99	42.857	ENSSSCG00000016565	ZC3HC1	100	42.821	Sus_scrofa
ENSTNIG00000007585	zc3hc1	50	33.871	ENSTGUG00000016262	ZC3HC1	97	35.573	Taeniopygia_guttata
ENSTNIG00000007585	zc3hc1	99	83.621	ENSTRUG00000020077	zc3hc1	99	83.537	Takifugu_rubripes
ENSTNIG00000007585	zc3hc1	99	35.391	ENSTBEG00000005216	ZC3HC1	94	35.950	Tupaia_belangeri
ENSTNIG00000007585	zc3hc1	99	41.770	ENSTTRG00000008458	ZC3HC1	99	43.149	Tursiops_truncatus
ENSTNIG00000007585	zc3hc1	99	43.852	ENSUAMG00000020249	ZC3HC1	95	43.763	Ursus_americanus
ENSTNIG00000007585	zc3hc1	99	43.852	ENSUMAG00000009268	ZC3HC1	94	43.827	Ursus_maritimus
ENSTNIG00000007585	zc3hc1	64	42.718	ENSVPAG00000010846	ZC3HC1	60	42.949	Vicugna_pacos
ENSTNIG00000007585	zc3hc1	93	42.982	ENSVVUG00000012386	ZC3HC1	92	43.107	Vulpes_vulpes
ENSTNIG00000007585	zc3hc1	94	40.830	ENSXETG00000033900	zc3hc1	94	41.176	Xenopus_tropicalis
ENSTNIG00000007585	zc3hc1	99	63.579	ENSXCOG00000013570	zc3hc1	99	62.823	Xiphophorus_couchianus
ENSTNIG00000007585	zc3hc1	94	65.708	ENSXMAG00000010979	zc3hc1	97	66.302	Xiphophorus_maculatus