EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000007729 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 6539 bases
Position: chr16:1829621-1836159
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010546	GTP_EFTU	PF00009.27	9.9e-65	1	1
ENSTNIP00000010546	GTP_EFTU_D2	PF03144.25	2e-17	1	1
ENSTNIP00000010546	EFG_IV	PF03764.18	3.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010727	-	2247	-	ENSTNIP00000010546	748 (aa)	-	H3CQL2

Gene Model

Click here to download ENSTNIG00000007729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000007729	gfm1	64	52.381	ENSTNIG00000010631	-	66	52.381
ENSTNIG00000007729	gfm1	50	31.731	ENSTNIG00000004218	guf1	61	31.731
ENSTNIG00000007729	gfm1	92	32.377	ENSTNIG00000013438	gfm2	97	32.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007729	gfm1	97	80.579	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSTNIG00000007729	gfm1	92	87.645	ENSAPOG00000016489	gfm1	98	87.645	Acanthochromis_polyacanthus
ENSTNIG00000007729	gfm1	96	82.173	ENSAMEG00000013542	GFM1	95	82.173	Ailuropoda_melanoleuca
ENSTNIG00000007729	gfm1	97	85.655	ENSACIG00000014465	gfm1	94	85.655	Amphilophus_citrinellus
ENSTNIG00000007729	gfm1	100	87.834	ENSAOCG00000006023	gfm1	100	87.834	Amphiprion_ocellaris
ENSTNIG00000007729	gfm1	100	87.834	ENSAPEG00000024499	gfm1	100	87.834	Amphiprion_percula
ENSTNIG00000007729	gfm1	100	89.572	ENSATEG00000013789	gfm1	100	89.572	Anabas_testudineus
ENSTNIG00000007729	gfm1	97	79.724	ENSAPLG00000005022	GFM1	100	79.724	Anas_platyrhynchos
ENSTNIG00000007729	gfm1	97	80.690	ENSACAG00000006829	GFM1	98	80.690	Anolis_carolinensis
ENSTNIG00000007729	gfm1	97	80.441	ENSANAG00000035983	GFM1	97	80.441	Aotus_nancymaae
ENSTNIG00000007729	gfm1	100	90.107	ENSACLG00000016586	gfm1	100	90.107	Astatotilapia_calliptera
ENSTNIG00000007729	gfm1	100	83.289	ENSAMXG00000013435	gfm1	97	85.201	Astyanax_mexicanus
ENSTNIG00000007729	gfm1	96	81.476	ENSBTAG00000027795	GFM1	95	81.476	Bos_taurus
ENSTNIG00000007729	gfm1	94	58.773	WBGene00009246	gfm-1	95	58.427	Caenorhabditis_elegans
ENSTNIG00000007729	gfm1	100	79.073	ENSCJAG00000000363	GFM1	100	79.073	Callithrix_jacchus
ENSTNIG00000007729	gfm1	96	82.033	ENSCAFG00000009006	GFM1	100	81.657	Canis_familiaris
ENSTNIG00000007729	gfm1	96	82.033	ENSCAFG00020005878	GFM1	98	82.033	Canis_lupus_dingo
ENSTNIG00000007729	gfm1	96	81.476	ENSCHIG00000015220	GFM1	95	81.476	Capra_hircus
ENSTNIG00000007729	gfm1	97	80.579	ENSTSYG00000002013	GFM1	96	80.579	Carlito_syrichta
ENSTNIG00000007729	gfm1	96	71.547	ENSCAPG00000005699	GFM1	97	71.547	Cavia_aperea
ENSTNIG00000007729	gfm1	97	80.992	ENSCPOG00000001194	GFM1	96	80.992	Cavia_porcellus
ENSTNIG00000007729	gfm1	100	78.411	ENSCCAG00000025561	GFM1	100	78.411	Cebus_capucinus
ENSTNIG00000007729	gfm1	97	80.716	ENSCATG00000037622	GFM1	97	80.716	Cercocebus_atys
ENSTNIG00000007729	gfm1	97	80.716	ENSCLAG00000002503	GFM1	96	80.716	Chinchilla_lanigera
ENSTNIG00000007729	gfm1	97	80.992	ENSCSAG00000012162	GFM1	97	80.992	Chlorocebus_sabaeus
ENSTNIG00000007729	gfm1	100	70.424	ENSCHOG00000004867	GFM1	100	70.424	Choloepus_hoffmanni
ENSTNIG00000007729	gfm1	100	79.813	ENSCPBG00000018367	GFM1	99	79.813	Chrysemys_picta_bellii
ENSTNIG00000007729	gfm1	99	57.275	ENSCING00000011960	-	98	57.275	Ciona_intestinalis
ENSTNIG00000007729	gfm1	95	59.722	ENSCSAVG00000008514	-	99	59.829	Ciona_savignyi
ENSTNIG00000007729	gfm1	97	80.854	ENSCANG00000031714	GFM1	97	80.854	Colobus_angolensis_palliatus
ENSTNIG00000007729	gfm1	100	78.429	ENSCGRG00001022095	GFM1	100	78.429	Cricetulus_griseus_chok1gshd
ENSTNIG00000007729	gfm1	100	78.429	ENSCGRG00000012043	GFM1	100	78.429	Cricetulus_griseus_crigri
ENSTNIG00000007729	gfm1	97	83.541	ENSCSEG00000017088	gfm1	99	83.541	Cynoglossus_semilaevis
ENSTNIG00000007729	gfm1	100	89.572	ENSCVAG00000004126	gfm1	100	89.572	Cyprinodon_variegatus
ENSTNIG00000007729	gfm1	100	83.155	ENSDARG00000063624	gfm1	100	83.155	Danio_rerio
ENSTNIG00000007729	gfm1	55	79.218	ENSDNOG00000016385	-	100	79.218	Dasypus_novemcinctus
ENSTNIG00000007729	gfm1	100	77.025	ENSDORG00000014165	Gfm1	100	77.025	Dipodomys_ordii
ENSTNIG00000007729	gfm1	95	69.111	FBgn0263133	mEFG1	95	69.111	Drosophila_melanogaster
ENSTNIG00000007729	gfm1	96	73.648	ENSETEG00000019197	GFM1	95	73.648	Echinops_telfairi
ENSTNIG00000007729	gfm1	90	61.778	ENSEBUG00000012794	gfm1	100	61.778	Eptatretus_burgeri
ENSTNIG00000007729	gfm1	96	60.694	ENSEEUG00000000429	GFM1	99	60.694	Erinaceus_europaeus
ENSTNIG00000007729	gfm1	100	84.893	ENSELUG00000014728	gfm1	100	84.893	Esox_lucius
ENSTNIG00000007729	gfm1	97	80.992	ENSFCAG00000013291	GFM1	96	80.992	Felis_catus
ENSTNIG00000007729	gfm1	90	79.556	ENSFALG00000007619	GFM1	100	79.556	Ficedula_albicollis
ENSTNIG00000007729	gfm1	100	78.117	ENSFDAG00000016559	GFM1	100	78.117	Fukomys_damarensis
ENSTNIG00000007729	gfm1	100	90.642	ENSFHEG00000006091	gfm1	100	90.642	Fundulus_heteroclitus
ENSTNIG00000007729	gfm1	97	86.107	ENSGMOG00000010161	gfm1	100	86.107	Gadus_morhua
ENSTNIG00000007729	gfm1	97	80.138	ENSGALG00000009634	GFM1	98	80.138	Gallus_gallus
ENSTNIG00000007729	gfm1	100	90.241	ENSGAFG00000012527	gfm1	100	90.241	Gambusia_affinis
ENSTNIG00000007729	gfm1	100	89.586	ENSGACG00000009864	gfm1	100	89.586	Gasterosteus_aculeatus
ENSTNIG00000007729	gfm1	97	80.854	ENSGGOG00000003085	GFM1	97	80.854	Gorilla_gorilla
ENSTNIG00000007729	gfm1	100	90.241	ENSHBUG00000002120	gfm1	100	90.241	Haplochromis_burtoni
ENSTNIG00000007729	gfm1	97	80.028	ENSHGLG00000016855	GFM1	96	80.028	Heterocephalus_glaber_female
ENSTNIG00000007729	gfm1	97	80.028	ENSHGLG00100013049	GFM1	96	80.028	Heterocephalus_glaber_male
ENSTNIG00000007729	gfm1	100	87.834	ENSHCOG00000007638	gfm1	100	87.834	Hippocampus_comes
ENSTNIG00000007729	gfm1	100	85.428	ENSIPUG00000005873	gfm1	100	85.428	Ictalurus_punctatus
ENSTNIG00000007729	gfm1	97	79.063	ENSSTOG00000010150	GFM1	98	79.063	Ictidomys_tridecemlineatus
ENSTNIG00000007729	gfm1	100	78.029	ENSJJAG00000016447	Gfm1	100	78.029	Jaculus_jaculus
ENSTNIG00000007729	gfm1	100	86.364	ENSKMAG00000020768	gfm1	100	86.364	Kryptolebias_marmoratus
ENSTNIG00000007729	gfm1	94	90.300	ENSLBEG00000021315	gfm1	100	90.300	Labrus_bergylta
ENSTNIG00000007729	gfm1	100	80.882	ENSLACG00000012295	GFM1	100	80.882	Latimeria_chalumnae
ENSTNIG00000007729	gfm1	97	79.754	ENSLOCG00000003778	gfm1	100	79.754	Lepisosteus_oculatus
ENSTNIG00000007729	gfm1	99	77.867	ENSLAFG00000010945	GFM1	99	78.889	Loxodonta_africana
ENSTNIG00000007729	gfm1	100	79.095	ENSMFAG00000035731	GFM1	100	79.095	Macaca_fascicularis
ENSTNIG00000007729	gfm1	100	79.095	ENSMMUG00000004961	GFM1	100	79.095	Macaca_mulatta
ENSTNIG00000007729	gfm1	97	80.716	ENSMNEG00000033245	GFM1	97	80.716	Macaca_nemestrina
ENSTNIG00000007729	gfm1	97	78.897	ENSMLEG00000030908	GFM1	99	78.919	Mandrillus_leucophaeus
ENSTNIG00000007729	gfm1	100	88.770	ENSMAMG00000011760	gfm1	100	88.770	Mastacembelus_armatus
ENSTNIG00000007729	gfm1	100	90.241	ENSMZEG00005016639	gfm1	100	90.241	Maylandia_zebra
ENSTNIG00000007729	gfm1	97	80.387	ENSMGAG00000010641	GFM1	97	80.387	Meleagris_gallopavo
ENSTNIG00000007729	gfm1	97	80.552	ENSMAUG00000000611	Gfm1	97	80.552	Mesocricetus_auratus
ENSTNIG00000007729	gfm1	97	81.267	ENSMICG00000049086	GFM1	96	81.267	Microcebus_murinus
ENSTNIG00000007729	gfm1	100	79.095	ENSMOCG00000000465	Gfm1	100	79.095	Microtus_ochrogaster
ENSTNIG00000007729	gfm1	97	92.011	ENSMMOG00000012538	gfm1	98	92.011	Mola_mola
ENSTNIG00000007729	gfm1	98	79.620	ENSMODG00000015673	GFM1	99	79.620	Monodelphis_domestica
ENSTNIG00000007729	gfm1	96	88.424	ENSMALG00000012508	gfm1	95	88.424	Monopterus_albus
ENSTNIG00000007729	gfm1	100	78.296	MGP_CAROLIEiJ_G0025052	Gfm1	100	78.296	Mus_caroli
ENSTNIG00000007729	gfm1	100	78.296	ENSMUSG00000027774	Gfm1	100	78.296	Mus_musculus
ENSTNIG00000007729	gfm1	100	78.429	MGP_PahariEiJ_G0026495	Gfm1	100	78.429	Mus_pahari
ENSTNIG00000007729	gfm1	100	78.296	MGP_SPRETEiJ_G0025994	Gfm1	100	78.296	Mus_spretus
ENSTNIG00000007729	gfm1	98	80.408	ENSMPUG00000002859	GFM1	97	80.408	Mustela_putorius_furo
ENSTNIG00000007729	gfm1	97	81.129	ENSMLUG00000000452	GFM1	96	81.129	Myotis_lucifugus
ENSTNIG00000007729	gfm1	97	80.138	ENSNGAG00000012375	Gfm1	97	80.138	Nannospalax_galili
ENSTNIG00000007729	gfm1	97	90.797	ENSNBRG00000004631	gfm1	99	90.797	Neolamprologus_brichardi
ENSTNIG00000007729	gfm1	97	80.854	ENSNLEG00000004176	GFM1	97	80.854	Nomascus_leucogenys
ENSTNIG00000007729	gfm1	91	72.500	ENSMEUG00000007784	GFM1	99	72.500	Notamacropus_eugenii
ENSTNIG00000007729	gfm1	97	79.890	ENSOPRG00000009860	GFM1	98	79.890	Ochotona_princeps
ENSTNIG00000007729	gfm1	97	81.267	ENSODEG00000004316	GFM1	95	81.919	Octodon_degus
ENSTNIG00000007729	gfm1	100	90.775	ENSONIG00000003772	gfm1	100	90.775	Oreochromis_niloticus
ENSTNIG00000007729	gfm1	97	81.319	ENSOCUG00000013561	GFM1	97	81.319	Oryctolagus_cuniculus
ENSTNIG00000007729	gfm1	95	90.254	ENSORLG00000006487	gfm1	100	90.254	Oryzias_latipes
ENSTNIG00000007729	gfm1	100	89.171	ENSORLG00020003362	gfm1	100	89.171	Oryzias_latipes_hni
ENSTNIG00000007729	gfm1	100	89.171	ENSORLG00015005829	gfm1	100	89.171	Oryzias_latipes_hsok
ENSTNIG00000007729	gfm1	100	89.037	ENSOMEG00000012894	gfm1	100	89.037	Oryzias_melastigma
ENSTNIG00000007729	gfm1	97	80.579	ENSOGAG00000008298	GFM1	96	80.579	Otolemur_garnettii
ENSTNIG00000007729	gfm1	96	80.583	ENSOARG00000002409	GFM1	99	80.583	Ovis_aries
ENSTNIG00000007729	gfm1	97	80.854	ENSPPAG00000033881	GFM1	97	80.854	Pan_paniscus
ENSTNIG00000007729	gfm1	97	80.992	ENSPPRG00000009281	GFM1	96	80.992	Panthera_pardus
ENSTNIG00000007729	gfm1	97	80.854	ENSPTIG00000012416	GFM1	96	80.854	Panthera_tigris_altaica
ENSTNIG00000007729	gfm1	97	80.854	ENSPTRG00000015570	GFM1	97	80.854	Pan_troglodytes
ENSTNIG00000007729	gfm1	97	80.716	ENSPANG00000016512	GFM1	97	80.716	Papio_anubis
ENSTNIG00000007729	gfm1	100	83.289	ENSPKIG00000004876	gfm1	100	83.289	Paramormyrops_kingsleyae
ENSTNIG00000007729	gfm1	100	79.679	ENSPSIG00000012567	GFM1	99	79.679	Pelodiscus_sinensis
ENSTNIG00000007729	gfm1	97	87.172	ENSPMGG00000014068	gfm1	100	87.172	Periophthalmus_magnuspinnatus
ENSTNIG00000007729	gfm1	100	78.695	ENSPEMG00000008942	Gfm1	100	78.695	Peromyscus_maniculatus_bairdii
ENSTNIG00000007729	gfm1	86	78.125	ENSPCIG00000020195	GFM1	97	80.000	Phascolarctos_cinereus
ENSTNIG00000007729	gfm1	100	90.775	ENSPFOG00000011022	gfm1	100	90.775	Poecilia_formosa
ENSTNIG00000007729	gfm1	98	90.574	ENSPLAG00000019585	gfm1	100	89.888	Poecilia_latipinna
ENSTNIG00000007729	gfm1	100	90.642	ENSPMEG00000012376	gfm1	100	90.642	Poecilia_mexicana
ENSTNIG00000007729	gfm1	100	90.374	ENSPREG00000001332	gfm1	95	90.374	Poecilia_reticulata
ENSTNIG00000007729	gfm1	97	80.579	ENSPPYG00000014244	GFM1	97	80.579	Pongo_abelii
ENSTNIG00000007729	gfm1	94	79.943	ENSPCAG00000008934	GFM1	100	79.943	Procavia_capensis
ENSTNIG00000007729	gfm1	97	80.854	ENSPCOG00000022259	GFM1	96	80.854	Propithecus_coquereli
ENSTNIG00000007729	gfm1	97	80.579	ENSPVAG00000013605	GFM1	96	80.579	Pteropus_vampyrus
ENSTNIG00000007729	gfm1	100	89.973	ENSPNYG00000006037	gfm1	100	89.973	Pundamilia_nyererei
ENSTNIG00000007729	gfm1	100	84.626	ENSPNAG00000001237	gfm1	100	84.626	Pygocentrus_nattereri
ENSTNIG00000007729	gfm1	100	78.562	ENSRNOG00000012873	Gfm1	100	78.562	Rattus_norvegicus
ENSTNIG00000007729	gfm1	97	80.716	ENSRBIG00000031363	GFM1	97	80.716	Rhinopithecus_bieti
ENSTNIG00000007729	gfm1	97	80.854	ENSRROG00000031081	GFM1	97	80.854	Rhinopithecus_roxellana
ENSTNIG00000007729	gfm1	92	56.628	YLR069C	-	90	56.628	Saccharomyces_cerevisiae
ENSTNIG00000007729	gfm1	97	80.441	ENSSBOG00000023252	GFM1	97	80.441	Saimiri_boliviensis_boliviensis
ENSTNIG00000007729	gfm1	97	81.881	ENSSHAG00000017772	GFM1	97	81.655	Sarcophilus_harrisii
ENSTNIG00000007729	gfm1	100	83.044	ENSSFOG00015003117	gfm1	100	83.044	Scleropages_formosus
ENSTNIG00000007729	gfm1	100	89.439	ENSSMAG00000013221	gfm1	100	89.439	Scophthalmus_maximus
ENSTNIG00000007729	gfm1	100	90.508	ENSSDUG00000018665	gfm1	100	90.508	Seriola_dumerili
ENSTNIG00000007729	gfm1	100	90.374	ENSSLDG00000020606	gfm1	100	90.374	Seriola_lalandi_dorsalis
ENSTNIG00000007729	gfm1	97	77.931	ENSSPUG00000018686	GFM1	98	77.931	Sphenodon_punctatus
ENSTNIG00000007729	gfm1	100	91.176	ENSSPAG00000008800	gfm1	100	91.176	Stegastes_partitus
ENSTNIG00000007729	gfm1	96	80.919	ENSSSCG00000025651	GFM1	95	80.919	Sus_scrofa
ENSTNIG00000007729	gfm1	100	91.444	ENSTRUG00000009244	gfm1	100	91.444	Takifugu_rubripes
ENSTNIG00000007729	gfm1	90	72.741	ENSTBEG00000017404	GFM1	89	72.741	Tupaia_belangeri
ENSTNIG00000007729	gfm1	96	81.058	ENSTTRG00000001735	GFM1	95	81.058	Tursiops_truncatus
ENSTNIG00000007729	gfm1	97	81.267	ENSUAMG00000026381	GFM1	97	80.764	Ursus_americanus
ENSTNIG00000007729	gfm1	97	81.129	ENSUMAG00000011268	GFM1	97	80.628	Ursus_maritimus
ENSTNIG00000007729	gfm1	97	77.793	ENSVPAG00000009444	GFM1	96	77.793	Vicugna_pacos
ENSTNIG00000007729	gfm1	96	82.123	ENSVVUG00000020091	GFM1	100	81.657	Vulpes_vulpes
ENSTNIG00000007729	gfm1	100	80.984	ENSXETG00000032551	GFM1	100	80.984	Xenopus_tropicalis
ENSTNIG00000007729	gfm1	54	86.849	ENSXCOG00000012590	gfm1	93	86.849	Xiphophorus_couchianus
ENSTNIG00000007729	gfm1	100	90.508	ENSXMAG00000000261	gfm1	100	90.508	Xiphophorus_maculatus