EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000007882 (Gene tree)
Gene ID: -
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: RAB18B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3551 bases
Position: chr15:2718050-2721600
Accession: ZDB-GENE-040801-185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010702	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010883	-	1800	-	ENSTNIP00000010702	206 (aa)	-	H3CR18

Gene Model

Click here to download ENSTNIG00000007882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000007882	rab18b	78	31.325	ENSTNIG00000006596	dnajc27	61	31.325
ENSTNIG00000007882	rab18b	70	41.379	ENSTNIG00000008784	-	89	41.379
ENSTNIG00000007882	rab18b	84	46.857	ENSTNIG00000018319	-	85	46.857
ENSTNIG00000007882	rab18b	93	42.157	ENSTNIG00000011081	rab11bb	93	42.157
ENSTNIG00000007882	rab18b	76	36.709	ENSTNIG00000017844	-	84	36.709
ENSTNIG00000007882	rab18b	99	79.024	ENSTNIG00000008717	rab18a	99	79.024
ENSTNIG00000007882	rab18b	79	47.561	ENSTNIG00000014859	rab12	67	47.561
ENSTNIG00000007882	rab18b	78	41.317	ENSTNIG00000005090	rab25a	76	41.317
ENSTNIG00000007882	rab18b	85	33.889	ENSTNIG00000016231	rab34a	69	33.889
ENSTNIG00000007882	rab18b	79	39.759	ENSTNIG00000001956	RAB9A	79	39.759
ENSTNIG00000007882	rab18b	81	33.735	ENSTNIG00000012154	kras	87	33.735
ENSTNIG00000007882	rab18b	82	44.118	ENSTNIG00000001260	RAB15	78	44.118
ENSTNIG00000007882	rab18b	82	37.059	ENSTNIG00000007566	si:ch73-116o1.2	81	37.059
ENSTNIG00000007882	rab18b	95	41.791	ENSTNIG00000011711	rab5c	90	41.791
ENSTNIG00000007882	rab18b	58	34.454	ENSTNIG00000006917	si:cabz01085950.1	90	34.454
ENSTNIG00000007882	rab18b	94	40.609	ENSTNIG00000009196	rab5aa	91	40.609
ENSTNIG00000007882	rab18b	86	38.764	ENSTNIG00000015257	rab6bb	85	38.764
ENSTNIG00000007882	rab18b	95	35.678	ENSTNIG00000001195	rab9a	96	35.678
ENSTNIG00000007882	rab18b	93	38.000	ENSTNIG00000006650	RAB19	92	38.000
ENSTNIG00000007882	rab18b	93	42.157	ENSTNIG00000013184	-	93	42.157
ENSTNIG00000007882	rab18b	81	41.667	ENSTNIG00000018498	-	74	41.667
ENSTNIG00000007882	rab18b	80	32.386	ENSTNIG00000016158	rab34b	68	32.386
ENSTNIG00000007882	rab18b	91	41.053	ENSTNIG00000018267	rab22a	97	41.053
ENSTNIG00000007882	rab18b	74	40.994	ENSTNIG00000012343	-	68	40.994
ENSTNIG00000007882	rab18b	79	34.756	ENSTNIG00000001043	si:ch211-247i17.1	81	34.756
ENSTNIG00000007882	rab18b	79	46.951	ENSTNIG00000013182	-	75	46.951
ENSTNIG00000007882	rab18b	83	45.198	ENSTNIG00000004004	-	96	45.198
ENSTNIG00000007882	rab18b	86	33.520	ENSTNIG00000013137	ran	81	33.520
ENSTNIG00000007882	rab18b	79	37.725	ENSTNIG00000011114	-	81	37.725
ENSTNIG00000007882	rab18b	81	46.429	ENSTNIG00000016414	rab15	77	46.429
ENSTNIG00000007882	rab18b	79	46.951	ENSTNIG00000009039	rab14	74	46.951
ENSTNIG00000007882	rab18b	72	42.667	ENSTNIG00000010125	rab33ba	63	42.667
ENSTNIG00000007882	rab18b	96	35.784	ENSTNIG00000010122	rab33a	85	35.784
ENSTNIG00000007882	rab18b	84	33.523	ENSTNIG00000017951	rabl2	77	33.523
ENSTNIG00000007882	rab18b	81	34.337	ENSTNIG00000011385	hrasb	87	34.337
ENSTNIG00000007882	rab18b	78	46.914	ENSTNIG00000002003	-	79	46.914
ENSTNIG00000007882	rab18b	79	47.561	ENSTNIG00000011300	si:dkey-16l2.16	84	45.198
ENSTNIG00000007882	rab18b	92	37.949	ENSTNIG00000015000	zgc:101559	78	37.949
ENSTNIG00000007882	rab18b	79	37.423	ENSTNIG00000001448	-	96	37.423
ENSTNIG00000007882	rab18b	79	37.725	ENSTNIG00000014604	RAB7A	81	37.725
ENSTNIG00000007882	rab18b	73	52.980	ENSTNIG00000004511	-	93	52.980
ENSTNIG00000007882	rab18b	84	31.285	ENSTNIG00000014591	rheb	93	31.285
ENSTNIG00000007882	rab18b	83	33.721	ENSTNIG00000016575	rab23	73	33.721
ENSTNIG00000007882	rab18b	83	40.805	ENSTNIG00000003679	-	81	40.805
ENSTNIG00000007882	rab18b	89	46.032	ENSTNIG00000003472	rab2a	97	44.762
ENSTNIG00000007882	rab18b	83	40.230	ENSTNIG00000016831	RAB41	79	40.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007882	rab18b	99	82.439	ENSG00000099246	RAB18	99	82.439	Homo_sapiens
ENSTNIG00000007882	rab18b	100	88.350	ENSAPOG00000019881	rab18b	100	88.350	Acanthochromis_polyacanthus
ENSTNIG00000007882	rab18b	99	72.340	ENSAMEG00000015990	RAB18	99	72.340	Ailuropoda_melanoleuca
ENSTNIG00000007882	rab18b	100	89.320	ENSACIG00000008102	rab18b	100	89.320	Amphilophus_citrinellus
ENSTNIG00000007882	rab18b	100	88.350	ENSAOCG00000013479	rab18b	100	88.350	Amphiprion_ocellaris
ENSTNIG00000007882	rab18b	100	87.864	ENSAPEG00000022923	rab18b	100	87.864	Amphiprion_percula
ENSTNIG00000007882	rab18b	100	86.408	ENSATEG00000002952	rab18b	100	86.408	Anabas_testudineus
ENSTNIG00000007882	rab18b	99	82.439	ENSANAG00000035856	RAB18	99	82.439	Aotus_nancymaae
ENSTNIG00000007882	rab18b	100	87.864	ENSACLG00000015289	rab18b	100	87.864	Astatotilapia_calliptera
ENSTNIG00000007882	rab18b	99	88.780	ENSAMXG00000042073	rab18b	99	88.780	Astyanax_mexicanus
ENSTNIG00000007882	rab18b	99	82.927	ENSBTAG00000009871	RAB18	88	82.927	Bos_taurus
ENSTNIG00000007882	rab18b	99	81.463	ENSBTAG00000050873	-	99	81.463	Bos_taurus
ENSTNIG00000007882	rab18b	99	82.439	ENSCJAG00000045749	RAB18	99	82.439	Callithrix_jacchus
ENSTNIG00000007882	rab18b	99	82.927	ENSCAFG00020003253	RAB18	99	82.927	Canis_lupus_dingo
ENSTNIG00000007882	rab18b	99	82.927	ENSCHIG00000008749	RAB18	99	82.927	Capra_hircus
ENSTNIG00000007882	rab18b	99	82.439	ENSTSYG00000013092	RAB18	99	82.439	Carlito_syrichta
ENSTNIG00000007882	rab18b	99	82.439	ENSCPOG00000032827	RAB18	99	82.439	Cavia_porcellus
ENSTNIG00000007882	rab18b	99	82.439	ENSCCAG00000006762	RAB18	99	82.439	Cebus_capucinus
ENSTNIG00000007882	rab18b	99	82.439	ENSCATG00000009672	RAB18	99	82.439	Cercocebus_atys
ENSTNIG00000007882	rab18b	99	82.439	ENSCSAG00000011749	RAB18	99	82.439	Chlorocebus_sabaeus
ENSTNIG00000007882	rab18b	99	82.439	ENSCANG00000035397	RAB18	99	82.439	Colobus_angolensis_palliatus
ENSTNIG00000007882	rab18b	99	82.439	ENSCGRG00001017519	Rab18	99	82.439	Cricetulus_griseus_chok1gshd
ENSTNIG00000007882	rab18b	99	82.439	ENSCGRG00000017201	Rab18	99	82.439	Cricetulus_griseus_crigri
ENSTNIG00000007882	rab18b	95	88.718	ENSCSEG00000016803	rab18b	99	88.718	Cynoglossus_semilaevis
ENSTNIG00000007882	rab18b	99	86.829	ENSDARG00000098344	rab18b	99	86.829	Danio_rerio
ENSTNIG00000007882	rab18b	55	87.611	ENSDNOG00000038845	-	75	87.611	Dasypus_novemcinctus
ENSTNIG00000007882	rab18b	99	82.439	ENSDNOG00000047713	RAB18	99	82.439	Dasypus_novemcinctus
ENSTNIG00000007882	rab18b	84	81.034	ENSDORG00000029360	-	83	81.034	Dipodomys_ordii
ENSTNIG00000007882	rab18b	99	82.439	ENSDORG00000028596	-	99	82.439	Dipodomys_ordii
ENSTNIG00000007882	rab18b	99	82.439	ENSEASG00005007164	RAB18	99	82.439	Equus_asinus_asinus
ENSTNIG00000007882	rab18b	99	82.439	ENSECAG00000017521	RAB18	88	82.439	Equus_caballus
ENSTNIG00000007882	rab18b	100	83.575	ENSELUG00000016450	rab18b	100	83.575	Esox_lucius
ENSTNIG00000007882	rab18b	99	82.439	ENSFCAG00000027161	RAB18	99	82.439	Felis_catus
ENSTNIG00000007882	rab18b	93	83.854	ENSFALG00000007160	RAB18	99	83.010	Ficedula_albicollis
ENSTNIG00000007882	rab18b	100	88.835	ENSFHEG00000020035	rab18b	100	88.835	Fundulus_heteroclitus
ENSTNIG00000007882	rab18b	100	82.524	ENSGMOG00000016608	rab18b	100	82.524	Gadus_morhua
ENSTNIG00000007882	rab18b	99	83.415	ENSGALG00000007435	RAB18	99	83.415	Gallus_gallus
ENSTNIG00000007882	rab18b	100	88.835	ENSGAFG00000008560	rab18b	100	88.835	Gambusia_affinis
ENSTNIG00000007882	rab18b	100	86.893	ENSGACG00000016395	rab18b	100	86.893	Gasterosteus_aculeatus
ENSTNIG00000007882	rab18b	99	82.439	ENSGGOG00000008086	RAB18	99	82.439	Gorilla_gorilla
ENSTNIG00000007882	rab18b	100	87.864	ENSHBUG00000003696	rab18b	100	87.864	Haplochromis_burtoni
ENSTNIG00000007882	rab18b	99	81.951	ENSHGLG00000004365	RAB18	99	81.951	Heterocephalus_glaber_female
ENSTNIG00000007882	rab18b	99	72.195	ENSHGLG00000007301	-	95	72.195	Heterocephalus_glaber_female
ENSTNIG00000007882	rab18b	99	72.195	ENSHGLG00100009117	-	95	72.195	Heterocephalus_glaber_male
ENSTNIG00000007882	rab18b	99	81.951	ENSHGLG00100013089	-	99	81.951	Heterocephalus_glaber_male
ENSTNIG00000007882	rab18b	100	88.835	ENSHCOG00000002217	rab18b	100	88.835	Hippocampus_comes
ENSTNIG00000007882	rab18b	99	84.390	ENSIPUG00000010859	rab18b	99	84.390	Ictalurus_punctatus
ENSTNIG00000007882	rab18b	99	82.439	ENSSTOG00000014560	-	99	82.439	Ictidomys_tridecemlineatus
ENSTNIG00000007882	rab18b	100	88.835	ENSKMAG00000007364	rab18b	100	88.835	Kryptolebias_marmoratus
ENSTNIG00000007882	rab18b	100	89.806	ENSLBEG00000019428	rab18b	100	89.806	Labrus_bergylta
ENSTNIG00000007882	rab18b	99	74.634	ENSLACG00000011256	rab18b	99	74.634	Latimeria_chalumnae
ENSTNIG00000007882	rab18b	93	83.333	ENSLAFG00000015582	RAB18	99	82.439	Loxodonta_africana
ENSTNIG00000007882	rab18b	99	82.439	ENSMFAG00000006430	RAB18	99	82.439	Macaca_fascicularis
ENSTNIG00000007882	rab18b	98	82.090	ENSMMUG00000046971	RAB18	73	82.090	Macaca_mulatta
ENSTNIG00000007882	rab18b	99	82.439	ENSMNEG00000038180	RAB18	99	82.439	Macaca_nemestrina
ENSTNIG00000007882	rab18b	99	82.439	ENSMLEG00000033595	RAB18	99	82.439	Mandrillus_leucophaeus
ENSTNIG00000007882	rab18b	99	86.829	ENSMAMG00000018445	rab18b	99	86.829	Mastacembelus_armatus
ENSTNIG00000007882	rab18b	100	87.864	ENSMZEG00005008244	rab18b	100	87.864	Maylandia_zebra
ENSTNIG00000007882	rab18b	99	74.146	ENSMAUG00000020698	-	99	74.146	Mesocricetus_auratus
ENSTNIG00000007882	rab18b	93	83.333	ENSMICG00000017280	RAB18	99	82.439	Microcebus_murinus
ENSTNIG00000007882	rab18b	99	82.439	ENSMOCG00000013044	Rab18	99	82.439	Microtus_ochrogaster
ENSTNIG00000007882	rab18b	100	79.263	ENSMMOG00000017849	rab18b	100	79.263	Mola_mola
ENSTNIG00000007882	rab18b	99	74.146	ENSMODG00000024936	-	99	74.146	Monodelphis_domestica
ENSTNIG00000007882	rab18b	99	82.439	ENSMODG00000008253	RAB18	99	82.439	Monodelphis_domestica
ENSTNIG00000007882	rab18b	99	88.293	ENSMALG00000005069	rab18b	99	88.293	Monopterus_albus
ENSTNIG00000007882	rab18b	99	82.439	MGP_CAROLIEiJ_G0021978	Rab18	99	82.439	Mus_caroli
ENSTNIG00000007882	rab18b	99	82.439	ENSMUSG00000073639	Rab18	99	82.439	Mus_musculus
ENSTNIG00000007882	rab18b	99	82.439	MGP_PahariEiJ_G0018716	Rab18	99	82.439	Mus_pahari
ENSTNIG00000007882	rab18b	99	82.439	MGP_SPRETEiJ_G0022894	Rab18	99	82.439	Mus_spretus
ENSTNIG00000007882	rab18b	99	82.927	ENSMPUG00000010592	RAB18	99	82.927	Mustela_putorius_furo
ENSTNIG00000007882	rab18b	99	71.915	ENSMLUG00000027295	RAB18	99	71.915	Myotis_lucifugus
ENSTNIG00000007882	rab18b	99	82.927	ENSNGAG00000001465	Rab18	99	82.927	Nannospalax_galili
ENSTNIG00000007882	rab18b	100	87.379	ENSNBRG00000008137	rab18b	100	87.379	Neolamprologus_brichardi
ENSTNIG00000007882	rab18b	99	82.439	ENSNLEG00000016970	RAB18	99	82.439	Nomascus_leucogenys
ENSTNIG00000007882	rab18b	99	82.439	ENSODEG00000004150	-	99	82.439	Octodon_degus
ENSTNIG00000007882	rab18b	100	87.379	ENSONIG00000018673	rab18b	100	87.379	Oreochromis_niloticus
ENSTNIG00000007882	rab18b	99	82.927	ENSOANG00000021391	RAB18	99	82.927	Ornithorhynchus_anatinus
ENSTNIG00000007882	rab18b	99	81.463	ENSOCUG00000022307	RAB18	99	81.463	Oryctolagus_cuniculus
ENSTNIG00000007882	rab18b	100	88.350	ENSORLG00000009609	rab18b	100	88.350	Oryzias_latipes
ENSTNIG00000007882	rab18b	100	88.350	ENSORLG00020011590	rab18b	100	88.350	Oryzias_latipes_hni
ENSTNIG00000007882	rab18b	100	88.350	ENSORLG00015007182	rab18b	100	88.350	Oryzias_latipes_hsok
ENSTNIG00000007882	rab18b	100	88.350	ENSOMEG00000007546	rab18b	100	88.350	Oryzias_melastigma
ENSTNIG00000007882	rab18b	93	83.333	ENSOGAG00000028015	RAB18	99	82.439	Otolemur_garnettii
ENSTNIG00000007882	rab18b	99	82.927	ENSOARG00000016208	RAB18	99	82.927	Ovis_aries
ENSTNIG00000007882	rab18b	99	82.439	ENSPPAG00000041625	RAB18	99	82.439	Pan_paniscus
ENSTNIG00000007882	rab18b	99	82.439	ENSPPRG00000010314	RAB18	99	82.439	Panthera_pardus
ENSTNIG00000007882	rab18b	99	82.439	ENSPTIG00000011667	RAB18	99	82.439	Panthera_tigris_altaica
ENSTNIG00000007882	rab18b	99	82.439	ENSPTRG00000002384	RAB18	99	82.439	Pan_troglodytes
ENSTNIG00000007882	rab18b	99	82.439	ENSPANG00000023005	RAB18	99	82.439	Papio_anubis
ENSTNIG00000007882	rab18b	98	81.373	ENSPMAG00000005322	rab18b	98	81.373	Petromyzon_marinus
ENSTNIG00000007882	rab18b	99	82.927	ENSPCIG00000028705	-	88	82.927	Phascolarctos_cinereus
ENSTNIG00000007882	rab18b	100	88.835	ENSPFOG00000013491	rab18b	100	88.835	Poecilia_formosa
ENSTNIG00000007882	rab18b	100	88.835	ENSPLAG00000019136	rab18b	100	88.835	Poecilia_latipinna
ENSTNIG00000007882	rab18b	100	88.835	ENSPMEG00000008223	rab18b	100	88.835	Poecilia_mexicana
ENSTNIG00000007882	rab18b	99	82.439	ENSPPYG00000002172	RAB18	99	82.439	Pongo_abelii
ENSTNIG00000007882	rab18b	93	83.333	ENSPCOG00000018906	RAB18	99	82.439	Propithecus_coquereli
ENSTNIG00000007882	rab18b	100	87.864	ENSPNYG00000001751	rab18b	100	87.864	Pundamilia_nyererei
ENSTNIG00000007882	rab18b	99	87.317	ENSPNAG00000002404	rab18b	99	87.317	Pygocentrus_nattereri
ENSTNIG00000007882	rab18b	99	82.439	ENSRNOG00000018972	Rab18	99	82.439	Rattus_norvegicus
ENSTNIG00000007882	rab18b	99	81.951	ENSRBIG00000035948	RAB18	99	81.951	Rhinopithecus_bieti
ENSTNIG00000007882	rab18b	99	82.439	ENSRROG00000040563	RAB18	99	82.439	Rhinopithecus_roxellana
ENSTNIG00000007882	rab18b	99	82.927	ENSSHAG00000007613	RAB18	99	82.927	Sarcophilus_harrisii
ENSTNIG00000007882	rab18b	100	87.864	ENSSMAG00000011814	rab18b	100	87.864	Scophthalmus_maximus
ENSTNIG00000007882	rab18b	100	88.350	ENSSDUG00000005960	rab18b	100	88.350	Seriola_dumerili
ENSTNIG00000007882	rab18b	100	88.350	ENSSLDG00000006014	rab18b	100	88.350	Seriola_lalandi_dorsalis
ENSTNIG00000007882	rab18b	100	87.379	ENSSPAG00000020875	rab18b	100	87.379	Stegastes_partitus
ENSTNIG00000007882	rab18b	99	82.927	ENSSSCG00000028655	RAB18	99	82.927	Sus_scrofa
ENSTNIG00000007882	rab18b	93	73.516	ENSTGUG00000001105	-	99	73.391	Taeniopygia_guttata
ENSTNIG00000007882	rab18b	100	93.689	ENSTRUG00000004283	rab18b	100	94.175	Takifugu_rubripes
ENSTNIG00000007882	rab18b	99	82.927	ENSVVUG00000001705	RAB18	99	82.927	Vulpes_vulpes
ENSTNIG00000007882	rab18b	100	89.320	ENSXMAG00000006945	rab18b	100	90.291	Xiphophorus_maculatus