EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000007932 (Gene tree)
Gene ID: -
Gene Symbol: chd8
Alias: si:ch211-10e2.6|wu:fi45h08
Full Name: chromodomain helicase DNA binding protein 8
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 11556 bases
Position: chr15:2284992-2296547
Accession: ZDB-GENE-030131-6320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010752	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000010933	-	6960	-	ENSTNIP00000010752	2320 (aa)	-	H3CR68

Gene Model

Click here to download ENSTNIG00000007932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000007932	chd8	61	60.178	ENSTNIG00000017487	chd6	57	59.467
ENSTNIG00000007932	chd8	65	64.476	ENSTNIG00000002647	chd7	76	64.476
ENSTNIG00000007932	chd8	55	77.670	ENSTNIG00000003825	chd9	77	77.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007932	chd8	95	63.930	ENSG00000100888	CHD8	86	85.393	Homo_sapiens
ENSTNIG00000007932	chd8	97	80.917	ENSAPOG00000015560	chd8	94	81.009	Acanthochromis_polyacanthus
ENSTNIG00000007932	chd8	63	65.703	ENSAPOG00000009351	chd7	62	60.668	Acanthochromis_polyacanthus
ENSTNIG00000007932	chd8	95	64.697	ENSAMEG00000006307	CHD8	88	64.758	Ailuropoda_melanoleuca
ENSTNIG00000007932	chd8	59	67.421	ENSACIG00000001590	chd7	62	67.421	Amphilophus_citrinellus
ENSTNIG00000007932	chd8	100	78.560	ENSACIG00000006440	chd8	94	82.692	Amphilophus_citrinellus
ENSTNIG00000007932	chd8	97	82.243	ENSAOCG00000016793	chd8	95	82.334	Amphiprion_ocellaris
ENSTNIG00000007932	chd8	59	68.534	ENSAOCG00000002337	chd7	60	67.015	Amphiprion_ocellaris
ENSTNIG00000007932	chd8	96	81.247	ENSATEG00000007108	chd8	95	81.108	Anabas_testudineus
ENSTNIG00000007932	chd8	59	66.467	ENSATEG00000002590	chd7	60	66.766	Anabas_testudineus
ENSTNIG00000007932	chd8	84	63.327	ENSACAG00000003139	CHD8	79	63.614	Anolis_carolinensis
ENSTNIG00000007932	chd8	95	64.047	ENSANAG00000037714	CHD8	86	69.690	Aotus_nancymaae
ENSTNIG00000007932	chd8	100	80.095	ENSACLG00000019692	chd8	97	82.605	Astatotilapia_calliptera
ENSTNIG00000007932	chd8	64	62.965	ENSAMXG00000006180	chd7	61	63.612	Astyanax_mexicanus
ENSTNIG00000007932	chd8	62	66.111	ENSBTAG00000021841	CHD7	52	64.926	Bos_taurus
ENSTNIG00000007932	chd8	84	69.702	ENSBTAG00000020422	CHD8	86	69.873	Bos_taurus
ENSTNIG00000007932	chd8	95	64.208	ENSCJAG00000009002	CHD8	86	69.690	Callithrix_jacchus
ENSTNIG00000007932	chd8	95	64.796	ENSCAFG00000005626	CHD8	85	71.561	Canis_familiaris
ENSTNIG00000007932	chd8	95	64.605	ENSCAFG00020014565	CHD8	98	79.526	Canis_lupus_dingo
ENSTNIG00000007932	chd8	95	64.784	ENSCHIG00000026157	CHD8	87	64.773	Capra_hircus
ENSTNIG00000007932	chd8	95	64.408	ENSTSYG00000011939	CHD8	88	64.538	Carlito_syrichta
ENSTNIG00000007932	chd8	94	55.718	ENSCAPG00000016749	CHD8	82	61.615	Cavia_aperea
ENSTNIG00000007932	chd8	100	57.702	ENSCPOG00000002538	CHD8	88	64.296	Cavia_porcellus
ENSTNIG00000007932	chd8	95	64.145	ENSCCAG00000020467	CHD8	86	69.747	Cebus_capucinus
ENSTNIG00000007932	chd8	95	63.988	ENSCATG00000004861	CHD8	86	69.707	Cercocebus_atys
ENSTNIG00000007932	chd8	98	62.882	ENSCLAG00000001966	CHD8	88	64.244	Chinchilla_lanigera
ENSTNIG00000007932	chd8	65	64.097	ENSCLAG00000004679	CHD7	52	62.934	Chinchilla_lanigera
ENSTNIG00000007932	chd8	96	64.191	ENSCSAG00000016489	CHD8	88	64.472	Chlorocebus_sabaeus
ENSTNIG00000007932	chd8	89	64.842	ENSCHOG00000003782	CHD8	86	65.013	Choloepus_hoffmanni
ENSTNIG00000007932	chd8	94	64.615	ENSCPBG00000012687	CHD8	89	64.980	Chrysemys_picta_bellii
ENSTNIG00000007932	chd8	66	66.792	ENSCPBG00000021517	CHD7	87	67.092	Chrysemys_picta_bellii
ENSTNIG00000007932	chd8	95	63.939	ENSCANG00000042948	CHD8	86	69.707	Colobus_angolensis_palliatus
ENSTNIG00000007932	chd8	98	63.372	ENSCGRG00001014351	Chd8	90	63.321	Cricetulus_griseus_chok1gshd
ENSTNIG00000007932	chd8	98	63.372	ENSCGRG00000009710	Chd8	90	63.321	Cricetulus_griseus_crigri
ENSTNIG00000007932	chd8	100	76.761	ENSCSEG00000021155	chd8	95	77.327	Cynoglossus_semilaevis
ENSTNIG00000007932	chd8	62	65.669	ENSCSEG00000017886	chd7	64	61.978	Cynoglossus_semilaevis
ENSTNIG00000007932	chd8	66	62.141	ENSDARG00000075211	chd7	64	63.221	Danio_rerio
ENSTNIG00000007932	chd8	100	69.010	ENSDARG00000075543	chd8	95	73.075	Danio_rerio
ENSTNIG00000007932	chd8	95	65.111	ENSDNOG00000005838	CHD8	87	64.553	Dasypus_novemcinctus
ENSTNIG00000007932	chd8	85	63.274	ENSDORG00000002050	Chd8	79	63.645	Dipodomys_ordii
ENSTNIG00000007932	chd8	86	68.993	ENSETEG00000012353	CHD8	86	69.204	Echinops_telfairi
ENSTNIG00000007932	chd8	80	57.173	ENSEBUG00000007607	chd8	83	56.973	Eptatretus_burgeri
ENSTNIG00000007932	chd8	95	64.310	ENSEASG00005010882	CHD8	92	65.003	Equus_asinus_asinus
ENSTNIG00000007932	chd8	95	65.119	ENSECAG00000016102	CHD8	87	64.694	Equus_caballus
ENSTNIG00000007932	chd8	64	98.438	ENSEEUG00000003523	CHD8	67	98.438	Erinaceus_europaeus
ENSTNIG00000007932	chd8	69	57.641	ENSELUG00000024442	chd7	60	60.714	Esox_lucius
ENSTNIG00000007932	chd8	100	71.797	ENSELUG00000004302	chd8	96	72.050	Esox_lucius
ENSTNIG00000007932	chd8	95	64.877	ENSFCAG00000013859	CHD8	87	64.872	Felis_catus
ENSTNIG00000007932	chd8	95	64.187	ENSFDAG00000011368	CHD8	87	64.163	Fukomys_damarensis
ENSTNIG00000007932	chd8	84	84.144	ENSGMOG00000015075	chd8	93	83.981	Gadus_morhua
ENSTNIG00000007932	chd8	55	68.710	ENSGMOG00000004232	chd7	59	68.710	Gadus_morhua
ENSTNIG00000007932	chd8	63	65.563	ENSGAFG00000006858	chd7	53	64.796	Gambusia_affinis
ENSTNIG00000007932	chd8	89	83.952	ENSGACG00000014096	chd8	99	83.762	Gasterosteus_aculeatus
ENSTNIG00000007932	chd8	58	66.083	ENSGACG00000014897	chd7	63	65.171	Gasterosteus_aculeatus
ENSTNIG00000007932	chd8	94	64.069	ENSGAGG00000022951	CHD8	85	75.036	Gopherus_agassizii
ENSTNIG00000007932	chd8	76	69.149	ENSGAGG00000017996	CHD7	74	67.042	Gopherus_agassizii
ENSTNIG00000007932	chd8	95	64.051	ENSGGOG00000002251	CHD8	86	69.588	Gorilla_gorilla
ENSTNIG00000007932	chd8	97	81.566	ENSHBUG00000002850	chd8	94	81.806	Haplochromis_burtoni
ENSTNIG00000007932	chd8	98	62.583	ENSHGLG00000003559	CHD8	87	64.114	Heterocephalus_glaber_female
ENSTNIG00000007932	chd8	98	62.583	ENSHGLG00100001031	CHD8	87	64.114	Heterocephalus_glaber_male
ENSTNIG00000007932	chd8	91	77.597	ENSHCOG00000016611	chd8	94	79.612	Hippocampus_comes
ENSTNIG00000007932	chd8	63	65.094	ENSHCOG00000014380	chd7	61	65.538	Hippocampus_comes
ENSTNIG00000007932	chd8	64	58.311	ENSIPUG00000007585	chd7	63	58.675	Ictalurus_punctatus
ENSTNIG00000007932	chd8	100	68.337	ENSIPUG00000019891	chd8	96	68.290	Ictalurus_punctatus
ENSTNIG00000007932	chd8	95	64.500	ENSSTOG00000001854	CHD8	88	64.805	Ictidomys_tridecemlineatus
ENSTNIG00000007932	chd8	100	76.777	ENSKMAG00000020106	chd8	96	76.896	Kryptolebias_marmoratus
ENSTNIG00000007932	chd8	100	56.707	ENSLACG00000011367	CHD8	89	63.744	Latimeria_chalumnae
ENSTNIG00000007932	chd8	63	64.846	ENSLOCG00000005062	chd7	51	62.524	Lepisosteus_oculatus
ENSTNIG00000007932	chd8	95	63.738	ENSMFAG00000035402	CHD8	86	69.690	Macaca_fascicularis
ENSTNIG00000007932	chd8	95	63.738	ENSMMUG00000015002	CHD8	86	69.690	Macaca_mulatta
ENSTNIG00000007932	chd8	95	63.988	ENSMNEG00000031076	CHD8	86	69.690	Macaca_nemestrina
ENSTNIG00000007932	chd8	95	63.988	ENSMLEG00000035911	CHD8	86	69.690	Mandrillus_leucophaeus
ENSTNIG00000007932	chd8	87	81.310	ENSMAMG00000016297	chd8	85	78.678	Mastacembelus_armatus
ENSTNIG00000007932	chd8	97	82.348	ENSMZEG00005012027	chd8	94	82.407	Maylandia_zebra
ENSTNIG00000007932	chd8	98	58.736	ENSMAUG00000015827	Chd8	89	69.156	Mesocricetus_auratus
ENSTNIG00000007932	chd8	95	63.734	ENSMICG00000007735	CHD8	86	69.650	Microcebus_murinus
ENSTNIG00000007932	chd8	97	61.284	ENSMOCG00000013700	Chd8	93	61.965	Microtus_ochrogaster
ENSTNIG00000007932	chd8	100	79.887	ENSMMOG00000013335	chd8	94	84.145	Mola_mola
ENSTNIG00000007932	chd8	85	64.567	ENSMODG00000006219	CHD8	83	64.489	Monodelphis_domestica
ENSTNIG00000007932	chd8	97	81.625	ENSMALG00000011572	chd8	95	81.948	Monopterus_albus
ENSTNIG00000007932	chd8	59	68.631	ENSMALG00000004389	chd7	56	68.729	Monopterus_albus
ENSTNIG00000007932	chd8	95	64.515	MGP_CAROLIEiJ_G0019237	Chd8	85	69.805	Mus_caroli
ENSTNIG00000007932	chd8	95	64.515	ENSMUSG00000053754	Chd8	88	64.872	Mus_musculus
ENSTNIG00000007932	chd8	95	64.556	MGP_PahariEiJ_G0030258	Chd8	85	69.885	Mus_pahari
ENSTNIG00000007932	chd8	85	64.808	ENSMPUG00000000174	CHD8	76	64.941	Mustela_putorius_furo
ENSTNIG00000007932	chd8	95	65.022	ENSMLUG00000001878	CHD8	87	64.921	Myotis_lucifugus
ENSTNIG00000007932	chd8	98	63.070	ENSNGAG00000022658	Chd8	88	64.458	Nannospalax_galili
ENSTNIG00000007932	chd8	60	64.975	ENSNBRG00000001280	chd7	62	65.047	Neolamprologus_brichardi
ENSTNIG00000007932	chd8	97	81.338	ENSNBRG00000017428	chd8	94	81.304	Neolamprologus_brichardi
ENSTNIG00000007932	chd8	94	63.801	ENSNLEG00000014445	CHD8	86	69.588	Nomascus_leucogenys
ENSTNIG00000007932	chd8	94	56.859	ENSMEUG00000011732	CHD8	86	63.694	Notamacropus_eugenii
ENSTNIG00000007932	chd8	84	70.113	ENSOPRG00000016120	CHD8	88	70.640	Ochotona_princeps
ENSTNIG00000007932	chd8	97	63.155	ENSODEG00000001047	CHD8	93	64.194	Octodon_degus
ENSTNIG00000007932	chd8	70	57.746	ENSONIG00000016614	chd7	53	62.573	Oreochromis_niloticus
ENSTNIG00000007932	chd8	100	82.061	ENSONIG00000015569	chd8	100	82.038	Oreochromis_niloticus
ENSTNIG00000007932	chd8	62	65.972	ENSOANG00000005042	CHD7	71	63.413	Ornithorhynchus_anatinus
ENSTNIG00000007932	chd8	85	64.451	ENSOCUG00000010822	CHD8	87	64.973	Oryctolagus_cuniculus
ENSTNIG00000007932	chd8	100	77.935	ENSORLG00000012103	chd8	96	77.553	Oryzias_latipes
ENSTNIG00000007932	chd8	100	77.032	ENSORLG00020008031	chd8	85	80.621	Oryzias_latipes_hni
ENSTNIG00000007932	chd8	100	77.689	ENSOMEG00000012832	chd8	96	77.448	Oryzias_melastigma
ENSTNIG00000007932	chd8	85	64.423	ENSOGAG00000002722	CHD8	76	64.581	Otolemur_garnettii
ENSTNIG00000007932	chd8	95	64.833	ENSOARG00000019643	CHD8	87	64.822	Ovis_aries
ENSTNIG00000007932	chd8	95	63.957	ENSPPAG00000039987	CHD8	88	64.170	Pan_paniscus
ENSTNIG00000007932	chd8	95	64.877	ENSPPRG00000006591	CHD8	86	69.931	Panthera_pardus
ENSTNIG00000007932	chd8	95	64.877	ENSPTIG00000021989	CHD8	86	69.931	Panthera_tigris_altaica
ENSTNIG00000007932	chd8	95	64.258	ENSPTRG00000006124	CHD8	86	69.570	Pan_troglodytes
ENSTNIG00000007932	chd8	95	63.738	ENSPANG00000011742	CHD8	86	69.690	Papio_anubis
ENSTNIG00000007932	chd8	79	73.904	ENSPKIG00000009142	chd8	96	65.680	Paramormyrops_kingsleyae
ENSTNIG00000007932	chd8	66	64.918	ENSPKIG00000009637	chd7	50	64.468	Paramormyrops_kingsleyae
ENSTNIG00000007932	chd8	65	62.071	ENSPMGG00000018543	chd7	64	62.071	Periophthalmus_magnuspinnatus
ENSTNIG00000007932	chd8	95	64.659	ENSPEMG00000022977	Chd8	88	64.732	Peromyscus_maniculatus_bairdii
ENSTNIG00000007932	chd8	95	64.110	ENSPCIG00000020931	CHD8	99	58.590	Phascolarctos_cinereus
ENSTNIG00000007932	chd8	100	77.747	ENSPFOG00000016369	chd8	96	76.072	Poecilia_formosa
ENSTNIG00000007932	chd8	76	55.987	ENSPFOG00000004891	chd7	88	62.936	Poecilia_formosa
ENSTNIG00000007932	chd8	97	80.834	ENSPLAG00000018522	chd8	94	80.711	Poecilia_latipinna
ENSTNIG00000007932	chd8	57	65.950	ENSPMEG00000005879	chd7	60	62.704	Poecilia_mexicana
ENSTNIG00000007932	chd8	100	77.577	ENSPMEG00000006541	chd8	94	80.880	Poecilia_mexicana
ENSTNIG00000007932	chd8	100	77.821	ENSPREG00000021867	chd8	96	75.796	Poecilia_reticulata
ENSTNIG00000007932	chd8	95	64.100	ENSPPYG00000005596	CHD8	88	64.631	Pongo_abelii
ENSTNIG00000007932	chd8	81	77.026	ENSPCAG00000007099	CHD8	82	77.026	Procavia_capensis
ENSTNIG00000007932	chd8	72	56.651	ENSPCAG00000000227	CHD7	52	61.219	Procavia_capensis
ENSTNIG00000007932	chd8	95	63.818	ENSPCOG00000014628	CHD8	88	63.809	Propithecus_coquereli
ENSTNIG00000007932	chd8	79	67.682	ENSPVAG00000000272	CHD8	75	66.966	Pteropus_vampyrus
ENSTNIG00000007932	chd8	97	81.980	ENSPNYG00000018020	chd8	94	81.810	Pundamilia_nyererei
ENSTNIG00000007932	chd8	64	61.465	ENSPNYG00000012490	chd7	63	61.831	Pundamilia_nyererei
ENSTNIG00000007932	chd8	100	69.472	ENSPNAG00000003683	chd8	96	69.421	Pygocentrus_nattereri
ENSTNIG00000007932	chd8	95	64.543	ENSRNOG00000025011	Chd8	88	64.936	Rattus_norvegicus
ENSTNIG00000007932	chd8	95	60.780	ENSRBIG00000039239	CHD8	86	66.227	Rhinopithecus_bieti
ENSTNIG00000007932	chd8	95	63.988	ENSRROG00000044285	CHD8	86	69.707	Rhinopithecus_roxellana
ENSTNIG00000007932	chd8	95	64.047	ENSSBOG00000023442	CHD8	88	64.472	Saimiri_boliviensis_boliviensis
ENSTNIG00000007932	chd8	95	64.293	ENSSHAG00000008118	CHD8	87	64.648	Sarcophilus_harrisii
ENSTNIG00000007932	chd8	96	69.792	ENSSFOG00015011577	chd8	93	69.940	Scleropages_formosus
ENSTNIG00000007932	chd8	66	65.479	ENSSFOG00015015077	chd7	53	66.018	Scleropages_formosus
ENSTNIG00000007932	chd8	100	78.965	ENSSMAG00000014060	chd8	96	79.177	Scophthalmus_maximus
ENSTNIG00000007932	chd8	56	66.511	ENSSMAG00000001453	-	51	66.417	Scophthalmus_maximus
ENSTNIG00000007932	chd8	97	81.992	ENSSDUG00000012439	chd8	94	81.984	Seriola_dumerili
ENSTNIG00000007932	chd8	100	80.359	ENSSLDG00000001679	chd8	96	80.287	Seriola_lalandi_dorsalis
ENSTNIG00000007932	chd8	84	66.419	ENSSARG00000004849	CHD8	93	66.686	Sorex_araneus
ENSTNIG00000007932	chd8	63	65.728	ENSSPAG00000006320	chd7	56	65.496	Stegastes_partitus
ENSTNIG00000007932	chd8	100	79.021	ENSSPAG00000022956	chd8	96	78.821	Stegastes_partitus
ENSTNIG00000007932	chd8	85	64.924	ENSSSCG00000002127	CHD8	83	64.970	Sus_scrofa
ENSTNIG00000007932	chd8	100	85.651	ENSTRUG00000006682	chd8	98	91.758	Takifugu_rubripes
ENSTNIG00000007932	chd8	50	70.332	ENSTRUG00000008632	chd7	53	70.123	Takifugu_rubripes
ENSTNIG00000007932	chd8	68	83.721	ENSTBEG00000012606	CHD8	68	83.721	Tupaia_belangeri
ENSTNIG00000007932	chd8	80	69.292	ENSTTRG00000016076	CHD8	80	69.528	Tursiops_truncatus
ENSTNIG00000007932	chd8	63	74.760	ENSUAMG00000004198	CHD8	99	75.328	Ursus_americanus
ENSTNIG00000007932	chd8	65	64.325	ENSUAMG00000025734	CHD7	63	64.186	Ursus_americanus
ENSTNIG00000007932	chd8	77	53.178	ENSUMAG00000010436	CHD7	70	64.500	Ursus_maritimus
ENSTNIG00000007932	chd8	95	64.556	ENSUMAG00000004045	CHD8	92	64.357	Ursus_maritimus
ENSTNIG00000007932	chd8	53	77.308	ENSVPAG00000007359	CHD8	53	77.308	Vicugna_pacos
ENSTNIG00000007932	chd8	95	64.810	ENSVVUG00000009444	CHD8	89	64.822	Vulpes_vulpes
ENSTNIG00000007932	chd8	92	59.246	ENSXETG00000017194	CHD8	99	77.083	Xenopus_tropicalis