EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000007991 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 6487 bases
Position: chr15:722318-728804
Accession: 28987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010812	La	PF05383.17	4.3e-13	1	1
ENSTNIP00000002135	La	PF05383.17	4.6e-13	1	1
ENSTNIP00000010813	La	PF05383.17	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000618	LARP4B-203	2076	-	ENSTNIP00000002135	692 (aa)	-	H3C1L9
ENSTNIT00000010994	LARP4B-202	2292	-	ENSTNIP00000010812	764 (aa)	-	H3CRC8
ENSTNIT00000010995	LARP4B-201	2307	-	ENSTNIP00000010813	769 (aa)	-	H3CRC9

Gene Model

Click here to download ENSTNIG00000007991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000007991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000007991	LARP4B	75	38.603	ENSTNIG00000015109	larp4aa	66	42.115
ENSTNIG00000007991	LARP4B	75	40.293	ENSTNIG00000014571	larp4ab	71	39.851
ENSTNIG00000007991	LARP4B	99	96.104	ENSTNIG00000004571	-	99	96.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000007991	LARP4B	99	55.897	ENSG00000107929	LARP4B	100	56.667	Homo_sapiens
ENSTNIG00000007991	LARP4B	90	76.825	ENSAPOG00000020531	LARP4B	95	76.825	Acanthochromis_polyacanthus
ENSTNIG00000007991	LARP4B	99	53.782	ENSAMEG00000001810	LARP4B	99	54.215	Ailuropoda_melanoleuca
ENSTNIG00000007991	LARP4B	96	66.766	ENSAOCG00000007887	-	99	70.952	Amphiprion_ocellaris
ENSTNIG00000007991	LARP4B	99	72.524	ENSAPEG00000002512	LARP4B	92	72.385	Amphiprion_percula
ENSTNIG00000007991	LARP4B	100	74.377	ENSATEG00000012614	LARP4B	99	67.410	Anabas_testudineus
ENSTNIG00000007991	LARP4B	99	56.708	ENSAPLG00000003813	LARP4B	99	55.905	Anas_platyrhynchos
ENSTNIG00000007991	LARP4B	99	58.143	ENSACAG00000002858	LARP4B	99	53.384	Anolis_carolinensis
ENSTNIG00000007991	LARP4B	99	55.556	ENSANAG00000007531	-	99	55.311	Aotus_nancymaae
ENSTNIG00000007991	LARP4B	100	74.409	ENSACLG00000026356	LARP4B	99	68.970	Astatotilapia_calliptera
ENSTNIG00000007991	LARP4B	100	51.729	ENSAMXG00000003335	larp4b	92	50.143	Astyanax_mexicanus
ENSTNIG00000007991	LARP4B	100	55.477	ENSBTAG00000013899	LARP4B	98	55.260	Bos_taurus
ENSTNIG00000007991	LARP4B	99	55.769	ENSCJAG00000018434	LARP4B	99	55.829	Callithrix_jacchus
ENSTNIG00000007991	LARP4B	100	54.230	ENSCAFG00020004209	LARP4B	98	65.301	Canis_lupus_dingo
ENSTNIG00000007991	LARP4B	100	52.835	ENSCHIG00000013543	LARP4B	98	55.288	Capra_hircus
ENSTNIG00000007991	LARP4B	81	60.160	ENSTSYG00000002568	LARP4B	99	60.386	Carlito_syrichta
ENSTNIG00000007991	LARP4B	83	54.325	ENSCAPG00000009725	LARP4B	86	63.039	Cavia_aperea
ENSTNIG00000007991	LARP4B	99	55.134	ENSCPOG00000009375	LARP4B	99	55.000	Cavia_porcellus
ENSTNIG00000007991	LARP4B	99	55.172	ENSCCAG00000024869	LARP4B	99	55.440	Cebus_capucinus
ENSTNIG00000007991	LARP4B	99	56.282	ENSCATG00000019750	LARP4B	99	56.477	Cercocebus_atys
ENSTNIG00000007991	LARP4B	99	56.792	ENSCLAG00000011570	LARP4B	89	58.702	Chinchilla_lanigera
ENSTNIG00000007991	LARP4B	62	88.889	ENSCHOG00000007831	-	61	88.889	Choloepus_hoffmanni
ENSTNIG00000007991	LARP4B	99	57.842	ENSCPBG00000017063	LARP4B	99	55.513	Chrysemys_picta_bellii
ENSTNIG00000007991	LARP4B	99	54.534	ENSCANG00000038021	LARP4B	99	54.793	Colobus_angolensis_palliatus
ENSTNIG00000007991	LARP4B	99	54.861	ENSCGRG00001022930	Larp4b	98	63.768	Cricetulus_griseus_chok1gshd
ENSTNIG00000007991	LARP4B	99	54.861	ENSCGRG00000006022	Larp4b	98	63.768	Cricetulus_griseus_crigri
ENSTNIG00000007991	LARP4B	99	66.954	ENSCSEG00000007342	LARP4B	99	66.234	Cynoglossus_semilaevis
ENSTNIG00000007991	LARP4B	100	72.238	ENSCVAG00000008910	LARP4B	99	67.643	Cyprinodon_variegatus
ENSTNIG00000007991	LARP4B	100	53.782	ENSDARG00000062146	larp4b	95	52.676	Danio_rerio
ENSTNIG00000007991	LARP4B	95	54.532	ENSDNOG00000045543	-	99	60.117	Dasypus_novemcinctus
ENSTNIG00000007991	LARP4B	99	52.809	ENSDORG00000009328	Larp4b	86	62.228	Dipodomys_ordii
ENSTNIG00000007991	LARP4B	85	56.250	ENSETEG00000011249	LARP4B	90	56.268	Echinops_telfairi
ENSTNIG00000007991	LARP4B	99	53.782	ENSEASG00005019068	-	99	54.922	Equus_asinus_asinus
ENSTNIG00000007991	LARP4B	99	53.782	ENSECAG00000024040	LARP4B	99	54.793	Equus_caballus
ENSTNIG00000007991	LARP4B	99	53.717	ENSEEUG00000008391	LARP4B	97	54.414	Erinaceus_europaeus
ENSTNIG00000007991	LARP4B	95	40.148	ENSELUG00000001417	-	94	40.889	Esox_lucius
ENSTNIG00000007991	LARP4B	99	66.074	ENSELUG00000008626	LARP4B	99	59.827	Esox_lucius
ENSTNIG00000007991	LARP4B	99	54.418	ENSFCAG00000000721	-	99	54.393	Felis_catus
ENSTNIG00000007991	LARP4B	99	58.908	ENSFALG00000006961	LARP4B	99	55.969	Ficedula_albicollis
ENSTNIG00000007991	LARP4B	99	56.290	ENSFDAG00000006158	LARP4B	97	56.122	Fukomys_damarensis
ENSTNIG00000007991	LARP4B	99	62.949	ENSFHEG00000013037	LARP4B	99	63.069	Fundulus_heteroclitus
ENSTNIG00000007991	LARP4B	75	72.000	ENSGMOG00000010818	-	90	72.500	Gadus_morhua
ENSTNIG00000007991	LARP4B	99	57.730	ENSGALG00000006672	LARP4B	99	55.243	Gallus_gallus
ENSTNIG00000007991	LARP4B	100	68.302	ENSGACG00000017535	LARP4B	99	67.525	Gasterosteus_aculeatus
ENSTNIG00000007991	LARP4B	92	55.932	ENSGAGG00000008598	LARP4B	99	55.415	Gopherus_agassizii
ENSTNIG00000007991	LARP4B	99	55.769	ENSGGOG00000003572	LARP4B	99	55.699	Gorilla_gorilla
ENSTNIG00000007991	LARP4B	100	73.992	ENSHBUG00000007535	LARP4B	99	68.488	Haplochromis_burtoni
ENSTNIG00000007991	LARP4B	99	55.669	ENSHGLG00000012936	LARP4B	98	66.988	Heterocephalus_glaber_female
ENSTNIG00000007991	LARP4B	86	49.754	ENSHGLG00100017261	-	100	49.173	Heterocephalus_glaber_male
ENSTNIG00000007991	LARP4B	99	55.683	ENSHGLG00100016220	-	99	56.347	Heterocephalus_glaber_male
ENSTNIG00000007991	LARP4B	81	68.770	ENSHCOG00000011581	LARP4B	67	78.910	Hippocampus_comes
ENSTNIG00000007991	LARP4B	99	51.156	ENSIPUG00000009705	larp4b	97	49.185	Ictalurus_punctatus
ENSTNIG00000007991	LARP4B	87	66.427	ENSSTOG00000000587	LARP4B	86	66.586	Ictidomys_tridecemlineatus
ENSTNIG00000007991	LARP4B	99	54.073	ENSJJAG00000020847	Larp4b	99	54.522	Jaculus_jaculus
ENSTNIG00000007991	LARP4B	100	73.574	ENSKMAG00000021674	LARP4B	99	67.640	Kryptolebias_marmoratus
ENSTNIG00000007991	LARP4B	85	81.438	ENSLBEG00000025293	-	82	81.438	Labrus_bergylta
ENSTNIG00000007991	LARP4B	92	53.881	ENSLACG00000009492	LARP4B	86	58.833	Latimeria_chalumnae
ENSTNIG00000007991	LARP4B	97	63.543	ENSLOCG00000012290	larp4b	99	59.264	Lepisosteus_oculatus
ENSTNIG00000007991	LARP4B	99	54.511	ENSLAFG00000015334	LARP4B	99	54.972	Loxodonta_africana
ENSTNIG00000007991	LARP4B	99	56.870	ENSMFAG00000001766	LARP4B	99	54.793	Macaca_fascicularis
ENSTNIG00000007991	LARP4B	99	56.282	ENSMMUG00000005279	LARP4B	99	56.218	Macaca_mulatta
ENSTNIG00000007991	LARP4B	99	56.743	ENSMNEG00000014019	LARP4B	99	54.663	Macaca_nemestrina
ENSTNIG00000007991	LARP4B	99	56.322	ENSMLEG00000035198	LARP4B	99	56.606	Mandrillus_leucophaeus
ENSTNIG00000007991	LARP4B	100	74.965	ENSMAMG00000013742	LARP4B	99	67.706	Mastacembelus_armatus
ENSTNIG00000007991	LARP4B	85	80.135	ENSMZEG00005006498	-	95	79.534	Maylandia_zebra
ENSTNIG00000007991	LARP4B	93	72.660	ENSMZEG00005014594	-	99	68.579	Maylandia_zebra
ENSTNIG00000007991	LARP4B	99	54.937	ENSMGAG00000005472	LARP4B	99	54.942	Meleagris_gallopavo
ENSTNIG00000007991	LARP4B	99	54.861	ENSMAUG00000021657	Larp4b	99	53.453	Mesocricetus_auratus
ENSTNIG00000007991	LARP4B	99	56.034	ENSMICG00000001301	LARP4B	99	54.712	Microcebus_murinus
ENSTNIG00000007991	LARP4B	86	60.733	ENSMOCG00000021452	Larp4b	84	60.526	Microtus_ochrogaster
ENSTNIG00000007991	LARP4B	84	92.593	ENSMMOG00000011253	-	84	92.593	Mola_mola
ENSTNIG00000007991	LARP4B	95	56.928	ENSMODG00000005957	LARP4B	99	53.173	Monodelphis_domestica
ENSTNIG00000007991	LARP4B	99	58.693	ENSMALG00000012432	LARP4B	99	59.103	Monopterus_albus
ENSTNIG00000007991	LARP4B	99	55.355	MGP_CAROLIEiJ_G0018216	Larp4b	98	64.891	Mus_caroli
ENSTNIG00000007991	LARP4B	99	55.019	ENSMUSG00000033499	Larp4b	98	64.663	Mus_musculus
ENSTNIG00000007991	LARP4B	99	55.432	MGP_PahariEiJ_G0019266	Larp4b	98	64.891	Mus_pahari
ENSTNIG00000007991	LARP4B	99	54.892	MGP_SPRETEiJ_G0019074	Larp4b	98	64.663	Mus_spretus
ENSTNIG00000007991	LARP4B	100	55.125	ENSMPUG00000016220	LARP4B	98	55.443	Mustela_putorius_furo
ENSTNIG00000007991	LARP4B	96	53.673	ENSMLUG00000005880	LARP4B	98	54.494	Myotis_lucifugus
ENSTNIG00000007991	LARP4B	99	55.927	ENSNGAG00000001750	Larp4b	99	56.258	Nannospalax_galili
ENSTNIG00000007991	LARP4B	99	58.808	ENSNBRG00000020018	LARP4B	99	58.693	Neolamprologus_brichardi
ENSTNIG00000007991	LARP4B	99	55.385	ENSNLEG00000013442	LARP4B	99	55.699	Nomascus_leucogenys
ENSTNIG00000007991	LARP4B	82	43.446	ENSMEUG00000013114	-	83	43.446	Notamacropus_eugenii
ENSTNIG00000007991	LARP4B	99	53.384	ENSOPRG00000003300	LARP4B	99	53.915	Ochotona_princeps
ENSTNIG00000007991	LARP4B	99	51.681	ENSODEG00000001109	LARP4B	95	59.466	Octodon_degus
ENSTNIG00000007991	LARP4B	100	74.270	ENSONIG00000017705	LARP4B	99	69.782	Oreochromis_niloticus
ENSTNIG00000007991	LARP4B	99	54.369	ENSOANG00000006100	LARP4B	99	53.485	Ornithorhynchus_anatinus
ENSTNIG00000007991	LARP4B	99	54.084	ENSOCUG00000004950	LARP4B	98	53.665	Oryctolagus_cuniculus
ENSTNIG00000007991	LARP4B	99	72.664	ENSORLG00000006080	LARP4B	99	65.912	Oryzias_latipes
ENSTNIG00000007991	LARP4B	99	71.210	ENSORLG00020020940	LARP4B	99	65.769	Oryzias_latipes_hni
ENSTNIG00000007991	LARP4B	100	71.667	ENSORLG00015020608	LARP4B	99	65.938	Oryzias_latipes_hsok
ENSTNIG00000007991	LARP4B	100	70.793	ENSOMEG00000019619	LARP4B	99	65.212	Oryzias_melastigma
ENSTNIG00000007991	LARP4B	95	54.985	ENSOGAG00000011540	LARP4B	88	57.920	Otolemur_garnettii
ENSTNIG00000007991	LARP4B	100	52.762	ENSOARG00000015320	LARP4B	97	55.191	Ovis_aries
ENSTNIG00000007991	LARP4B	99	56.026	ENSPPAG00000039232	LARP4B	99	56.218	Pan_paniscus
ENSTNIG00000007991	LARP4B	99	54.571	ENSPPRG00000009489	LARP4B	99	55.168	Panthera_pardus
ENSTNIG00000007991	LARP4B	99	54.571	ENSPTIG00000008543	LARP4B	99	55.168	Panthera_tigris_altaica
ENSTNIG00000007991	LARP4B	99	56.026	ENSPTRG00000002235	LARP4B	99	56.218	Pan_troglodytes
ENSTNIG00000007991	LARP4B	99	56.870	ENSPANG00000023546	LARP4B	99	54.793	Papio_anubis
ENSTNIG00000007991	LARP4B	99	58.274	ENSPKIG00000012368	LARP4B	97	54.429	Paramormyrops_kingsleyae
ENSTNIG00000007991	LARP4B	79	66.561	ENSPSIG00000005600	LARP4B	99	66.486	Pelodiscus_sinensis
ENSTNIG00000007991	LARP4B	99	58.101	ENSPMGG00000008261	LARP4B	87	58.824	Periophthalmus_magnuspinnatus
ENSTNIG00000007991	LARP4B	99	54.875	ENSPEMG00000014052	Larp4b	89	57.732	Peromyscus_maniculatus_bairdii
ENSTNIG00000007991	LARP4B	99	72.715	ENSPFOG00000000029	LARP4B	99	67.534	Poecilia_formosa
ENSTNIG00000007991	LARP4B	99	72.614	ENSPLAG00000002871	LARP4B	99	68.701	Poecilia_latipinna
ENSTNIG00000007991	LARP4B	99	72.337	ENSPMEG00000016361	LARP4B	99	67.509	Poecilia_mexicana
ENSTNIG00000007991	LARP4B	99	56.163	ENSPPYG00000002035	LARP4B	98	55.330	Pongo_abelii
ENSTNIG00000007991	LARP4B	99	55.412	ENSPCOG00000014688	LARP4B	99	55.339	Propithecus_coquereli
ENSTNIG00000007991	LARP4B	80	55.088	ENSPVAG00000009784	LARP4B	81	54.695	Pteropus_vampyrus
ENSTNIG00000007991	LARP4B	100	74.548	ENSPNYG00000024252	LARP4B	99	68.615	Pundamilia_nyererei
ENSTNIG00000007991	LARP4B	100	51.700	ENSPNAG00000028956	larp4b	97	49.054	Pygocentrus_nattereri
ENSTNIG00000007991	LARP4B	99	55.230	ENSRNOG00000015888	Larp4b	100	54.604	Rattus_norvegicus
ENSTNIG00000007991	LARP4B	99	56.026	ENSRBIG00000033294	LARP4B	89	59.380	Rhinopithecus_bieti
ENSTNIG00000007991	LARP4B	99	56.154	ENSRROG00000033879	LARP4B	89	59.527	Rhinopithecus_roxellana
ENSTNIG00000007991	LARP4B	99	51.213	ENSSBOG00000021109	LARP4B	99	51.425	Saimiri_boliviensis_boliviensis
ENSTNIG00000007991	LARP4B	99	57.040	ENSSHAG00000013392	LARP4B	99	53.393	Sarcophilus_harrisii
ENSTNIG00000007991	LARP4B	99	60.028	ENSSFOG00015003256	LARP4B	91	55.115	Scleropages_formosus
ENSTNIG00000007991	LARP4B	84	92.593	ENSSMAG00000005982	-	99	89.286	Scophthalmus_maximus
ENSTNIG00000007991	LARP4B	99	76.751	ENSSDUG00000006704	LARP4B	99	69.835	Seriola_dumerili
ENSTNIG00000007991	LARP4B	85	92.593	ENSSLDG00000020660	LARP4B	99	89.286	Seriola_lalandi_dorsalis
ENSTNIG00000007991	LARP4B	62	83.178	ENSSARG00000001243	-	75	83.019	Sorex_araneus
ENSTNIG00000007991	LARP4B	84	74.468	ENSSPUG00000013734	-	88	69.231	Sphenodon_punctatus
ENSTNIG00000007991	LARP4B	99	55.861	ENSSPUG00000002102	-	99	55.118	Sphenodon_punctatus
ENSTNIG00000007991	LARP4B	85	96.296	ENSSPAG00000014628	LARP4B	83	96.296	Stegastes_partitus
ENSTNIG00000007991	LARP4B	100	54.242	ENSSSCG00000011162	LARP4B	98	56.101	Sus_scrofa
ENSTNIG00000007991	LARP4B	99	57.365	ENSTGUG00000000811	-	99	56.057	Taeniopygia_guttata
ENSTNIG00000007991	LARP4B	77	61.134	ENSTTRG00000011151	LARP4B	79	61.759	Tursiops_truncatus
ENSTNIG00000007991	LARP4B	86	57.459	ENSUAMG00000016461	LARP4B	95	58.220	Ursus_americanus
ENSTNIG00000007991	LARP4B	100	53.878	ENSUMAG00000016127	LARP4B	99	55.383	Ursus_maritimus
ENSTNIG00000007991	LARP4B	100	54.420	ENSVVUG00000008641	LARP4B	98	66.505	Vulpes_vulpes
ENSTNIG00000007991	LARP4B	99	57.797	ENSXETG00000016882	larp4b	100	55.683	Xenopus_tropicalis
ENSTNIG00000007991	LARP4B	99	63.171	ENSXCOG00000019952	LARP4B	99	63.329	Xiphophorus_couchianus
ENSTNIG00000007991	LARP4B	99	72.261	ENSXMAG00000021533	LARP4B	99	67.602	Xiphophorus_maculatus