EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000008058 (Gene tree)
Gene ID: -
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: PRP3 pre-mRNA processing factor 3 homolog (yeast)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3730 bases
Position: chr8:8942453-8946182
Accession: ZDB-GENE-040823-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010882	PRP3	PF08572.10	6.1e-77	1	1
ENSTNIP00000010882	PWI	PF01480.17	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011064	-	2106	-	ENSTNIP00000010882	702 (aa)	-	H3CRJ8

Gene Model

Click here to download ENSTNIG00000008058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008058	prpf3	100	71.449	ENSG00000117360	PRPF3	100	72.624	Homo_sapiens
ENSTNIG00000008058	prpf3	100	83.475	ENSAPOG00000015584	prpf3	99	83.757	Acanthochromis_polyacanthus
ENSTNIG00000008058	prpf3	100	71.591	ENSAMEG00000001630	PRPF3	100	72.766	Ailuropoda_melanoleuca
ENSTNIG00000008058	prpf3	100	82.188	ENSACIG00000007876	prpf3	99	82.188	Amphilophus_citrinellus
ENSTNIG00000008058	prpf3	100	83.333	ENSAOCG00000011449	prpf3	99	83.616	Amphiprion_ocellaris
ENSTNIG00000008058	prpf3	100	85.169	ENSATEG00000023583	prpf3	99	85.452	Anabas_testudineus
ENSTNIG00000008058	prpf3	100	73.475	ENSAPLG00000002440	PRPF3	100	73.654	Anas_platyrhynchos
ENSTNIG00000008058	prpf3	100	72.458	ENSACAG00000003176	PRPF3	100	72.791	Anolis_carolinensis
ENSTNIG00000008058	prpf3	100	71.449	ENSANAG00000026138	PRPF3	100	72.624	Aotus_nancymaae
ENSTNIG00000008058	prpf3	100	82.504	ENSACLG00000020127	prpf3	99	82.788	Astatotilapia_calliptera
ENSTNIG00000008058	prpf3	100	78.237	ENSAMXG00000007306	prpf3	99	78.237	Astyanax_mexicanus
ENSTNIG00000008058	prpf3	100	71.449	ENSBTAG00000013946	PRPF3	100	72.624	Bos_taurus
ENSTNIG00000008058	prpf3	81	38.687	WBGene00010844	prp-3	95	35.901	Caenorhabditis_elegans
ENSTNIG00000008058	prpf3	100	71.449	ENSCJAG00000009926	PRPF3	100	72.624	Callithrix_jacchus
ENSTNIG00000008058	prpf3	100	71.449	ENSCAFG00000011820	PRPF3	100	72.624	Canis_familiaris
ENSTNIG00000008058	prpf3	80	71.301	ENSCAFG00020019653	PRPF3	100	72.549	Canis_lupus_dingo
ENSTNIG00000008058	prpf3	100	71.449	ENSCHIG00000015434	PRPF3	100	72.624	Capra_hircus
ENSTNIG00000008058	prpf3	100	71.307	ENSTSYG00000001383	PRPF3	100	72.482	Carlito_syrichta
ENSTNIG00000008058	prpf3	93	61.832	ENSCAPG00000017812	PRPF3	95	62.652	Cavia_aperea
ENSTNIG00000008058	prpf3	100	71.307	ENSCPOG00000008068	PRPF3	100	72.482	Cavia_porcellus
ENSTNIG00000008058	prpf3	100	71.449	ENSCCAG00000026380	PRPF3	100	72.624	Cebus_capucinus
ENSTNIG00000008058	prpf3	100	58.956	ENSCATG00000041778	PRPF3	100	60.141	Cercocebus_atys
ENSTNIG00000008058	prpf3	100	71.591	ENSCLAG00000015009	PRPF3	100	72.766	Chinchilla_lanigera
ENSTNIG00000008058	prpf3	77	78.893	ENSCHOG00000011645	PRPF3	77	79.310	Choloepus_hoffmanni
ENSTNIG00000008058	prpf3	100	72.057	ENSCPBG00000008216	PRPF3	100	72.663	Chrysemys_picta_bellii
ENSTNIG00000008058	prpf3	60	58.824	ENSCING00000003312	-	99	58.824	Ciona_intestinalis
ENSTNIG00000008058	prpf3	80	53.710	ENSCSAVG00000008720	-	94	53.710	Ciona_savignyi
ENSTNIG00000008058	prpf3	100	71.023	ENSCANG00000036769	PRPF3	100	72.199	Colobus_angolensis_palliatus
ENSTNIG00000008058	prpf3	100	71.449	ENSCGRG00001019100	Prpf3	100	72.624	Cricetulus_griseus_chok1gshd
ENSTNIG00000008058	prpf3	100	71.449	ENSCGRG00000007322	Prpf3	100	72.624	Cricetulus_griseus_crigri
ENSTNIG00000008058	prpf3	100	81.678	ENSCSEG00000002532	prpf3	99	82.238	Cynoglossus_semilaevis
ENSTNIG00000008058	prpf3	100	81.560	ENSCVAG00000009318	prpf3	99	81.844	Cyprinodon_variegatus
ENSTNIG00000008058	prpf3	100	78.822	ENSDARG00000086425	prpf3	99	78.822	Danio_rerio
ENSTNIG00000008058	prpf3	79	74.686	ENSDNOG00000005904	PRPF3	100	66.051	Dasypus_novemcinctus
ENSTNIG00000008058	prpf3	93	71.145	ENSDORG00000008664	Prpf3	100	72.409	Dipodomys_ordii
ENSTNIG00000008058	prpf3	80	52.000	FBgn0036915	Prp3	99	52.305	Drosophila_melanogaster
ENSTNIG00000008058	prpf3	100	71.023	ENSETEG00000019124	PRPF3	100	72.199	Echinops_telfairi
ENSTNIG00000008058	prpf3	99	59.867	ENSEBUG00000011680	prpf3	99	59.867	Eptatretus_burgeri
ENSTNIG00000008058	prpf3	100	71.307	ENSEASG00005001566	PRPF3	100	72.482	Equus_asinus_asinus
ENSTNIG00000008058	prpf3	100	71.449	ENSECAG00000019840	PRPF3	100	72.624	Equus_caballus
ENSTNIG00000008058	prpf3	85	73.154	ENSEEUG00000007338	PRPF3	85	73.438	Erinaceus_europaeus
ENSTNIG00000008058	prpf3	100	71.950	ENSELUG00000013624	prpf3	99	72.230	Esox_lucius
ENSTNIG00000008058	prpf3	100	71.449	ENSFCAG00000013940	PRPF3	100	72.624	Felis_catus
ENSTNIG00000008058	prpf3	100	71.875	ENSFDAG00000010365	PRPF3	100	73.050	Fukomys_damarensis
ENSTNIG00000008058	prpf3	100	81.960	ENSFHEG00000021746	prpf3	99	82.244	Fundulus_heteroclitus
ENSTNIG00000008058	prpf3	100	77.840	ENSGMOG00000008535	prpf3	99	77.980	Gadus_morhua
ENSTNIG00000008058	prpf3	100	73.617	ENSGALG00000028205	PRPF3	100	73.796	Gallus_gallus
ENSTNIG00000008058	prpf3	100	81.392	ENSGAFG00000012671	prpf3	99	81.676	Gambusia_affinis
ENSTNIG00000008058	prpf3	100	81.742	ENSGACG00000011792	prpf3	99	82.022	Gasterosteus_aculeatus
ENSTNIG00000008058	prpf3	100	72.057	ENSGAGG00000013765	PRPF3	100	74.778	Gopherus_agassizii
ENSTNIG00000008058	prpf3	86	77.391	ENSGGOG00000013174	PRPF3	100	77.746	Gorilla_gorilla
ENSTNIG00000008058	prpf3	100	82.955	ENSHBUG00000003493	prpf3	99	83.239	Haplochromis_burtoni
ENSTNIG00000008058	prpf3	100	71.591	ENSHGLG00000016569	PRPF3	100	72.766	Heterocephalus_glaber_female
ENSTNIG00000008058	prpf3	100	53.201	ENSHGLG00000016033	-	100	53.267	Heterocephalus_glaber_female
ENSTNIG00000008058	prpf3	100	52.205	ENSHGLG00100008951	-	100	52.415	Heterocephalus_glaber_male
ENSTNIG00000008058	prpf3	100	71.591	ENSHGLG00100007590	PRPF3	100	72.766	Heterocephalus_glaber_male
ENSTNIG00000008058	prpf3	100	78.702	ENSHCOG00000014058	prpf3	99	78.984	Hippocampus_comes
ENSTNIG00000008058	prpf3	100	77.949	ENSIPUG00000000902	PRPF3	99	77.949	Ictalurus_punctatus
ENSTNIG00000008058	prpf3	100	71.449	ENSSTOG00000001889	PRPF3	100	72.624	Ictidomys_tridecemlineatus
ENSTNIG00000008058	prpf3	100	82.062	ENSKMAG00000001390	prpf3	99	89.130	Kryptolebias_marmoratus
ENSTNIG00000008058	prpf3	100	83.708	ENSLBEG00000026310	prpf3	99	83.989	Labrus_bergylta
ENSTNIG00000008058	prpf3	93	67.325	ENSLACG00000010541	PRPF3	100	67.830	Latimeria_chalumnae
ENSTNIG00000008058	prpf3	100	71.449	ENSLAFG00000004713	PRPF3	100	72.624	Loxodonta_africana
ENSTNIG00000008058	prpf3	100	71.449	ENSMFAG00000039791	PRPF3	100	72.624	Macaca_fascicularis
ENSTNIG00000008058	prpf3	90	71.698	ENSMMUG00000016301	PRPF3	99	72.799	Macaca_mulatta
ENSTNIG00000008058	prpf3	100	71.449	ENSMNEG00000038161	PRPF3	100	72.624	Macaca_nemestrina
ENSTNIG00000008058	prpf3	86	77.391	ENSMLEG00000040609	PRPF3	100	77.746	Mandrillus_leucophaeus
ENSTNIG00000008058	prpf3	99	49.211	ENSMLEG00000041065	-	97	49.498	Mandrillus_leucophaeus
ENSTNIG00000008058	prpf3	100	83.708	ENSMAMG00000014968	prpf3	99	83.708	Mastacembelus_armatus
ENSTNIG00000008058	prpf3	100	82.609	ENSMZEG00005015970	prpf3	99	88.043	Maylandia_zebra
ENSTNIG00000008058	prpf3	100	73.617	ENSMGAG00000000707	PRPF3	100	73.796	Meleagris_gallopavo
ENSTNIG00000008058	prpf3	100	71.449	ENSMAUG00000017112	Prpf3	100	72.482	Mesocricetus_auratus
ENSTNIG00000008058	prpf3	100	71.449	ENSMICG00000015386	PRPF3	100	75.089	Microcebus_murinus
ENSTNIG00000008058	prpf3	100	71.449	ENSMOCG00000000242	Prpf3	100	72.624	Microtus_ochrogaster
ENSTNIG00000008058	prpf3	100	78.691	ENSMMOG00000016131	prpf3	99	79.387	Mola_mola
ENSTNIG00000008058	prpf3	100	71.165	ENSMODG00000018774	PRPF3	100	72.340	Monodelphis_domestica
ENSTNIG00000008058	prpf3	100	81.702	ENSMALG00000007257	prpf3	99	81.702	Monopterus_albus
ENSTNIG00000008058	prpf3	100	71.023	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.199	Mus_caroli
ENSTNIG00000008058	prpf3	100	71.023	ENSMUSG00000015748	Prpf3	100	72.199	Mus_musculus
ENSTNIG00000008058	prpf3	100	71.165	MGP_PahariEiJ_G0026798	Prpf3	100	72.340	Mus_pahari
ENSTNIG00000008058	prpf3	100	71.023	MGP_SPRETEiJ_G0026298	Prpf3	100	72.199	Mus_spretus
ENSTNIG00000008058	prpf3	100	69.460	ENSMPUG00000005080	PRPF3	100	70.638	Mustela_putorius_furo
ENSTNIG00000008058	prpf3	100	71.773	ENSMLUG00000004646	-	100	72.946	Myotis_lucifugus
ENSTNIG00000008058	prpf3	100	71.449	ENSNGAG00000000910	Prpf3	100	72.624	Nannospalax_galili
ENSTNIG00000008058	prpf3	100	81.692	ENSNBRG00000003462	prpf3	99	82.108	Neolamprologus_brichardi
ENSTNIG00000008058	prpf3	89	72.134	ENSNLEG00000009841	PRPF3	100	73.248	Nomascus_leucogenys
ENSTNIG00000008058	prpf3	83	63.188	ENSMEUG00000008733	PRPF3	89	64.583	Notamacropus_eugenii
ENSTNIG00000008058	prpf3	100	71.449	ENSOPRG00000010139	PRPF3	100	72.624	Ochotona_princeps
ENSTNIG00000008058	prpf3	100	71.307	ENSODEG00000011363	-	100	72.482	Octodon_degus
ENSTNIG00000008058	prpf3	100	54.571	ENSODEG00000014412	-	100	55.259	Octodon_degus
ENSTNIG00000008058	prpf3	100	82.609	ENSONIG00000006394	prpf3	99	82.889	Oreochromis_niloticus
ENSTNIG00000008058	prpf3	100	55.853	ENSOANG00000015441	PRPF3	100	55.853	Ornithorhynchus_anatinus
ENSTNIG00000008058	prpf3	100	71.449	ENSOCUG00000011760	PRPF3	100	72.624	Oryctolagus_cuniculus
ENSTNIG00000008058	prpf3	100	82.955	ENSORLG00000010330	prpf3	99	82.955	Oryzias_latipes
ENSTNIG00000008058	prpf3	100	82.955	ENSORLG00020009054	prpf3	99	82.955	Oryzias_latipes_hni
ENSTNIG00000008058	prpf3	100	82.528	ENSORLG00015015016	prpf3	99	82.528	Oryzias_latipes_hsok
ENSTNIG00000008058	prpf3	100	83.665	ENSOMEG00000000940	prpf3	99	83.949	Oryzias_melastigma
ENSTNIG00000008058	prpf3	100	67.518	ENSOGAG00000005352	PRPF3	100	68.555	Otolemur_garnettii
ENSTNIG00000008058	prpf3	100	71.449	ENSOARG00000020798	PRPF3	100	72.624	Ovis_aries
ENSTNIG00000008058	prpf3	100	71.307	ENSPPAG00000030983	PRPF3	100	72.482	Pan_paniscus
ENSTNIG00000008058	prpf3	99	55.780	ENSPPAG00000043769	-	99	55.700	Pan_paniscus
ENSTNIG00000008058	prpf3	100	71.449	ENSPPRG00000000731	PRPF3	100	72.624	Panthera_pardus
ENSTNIG00000008058	prpf3	100	71.449	ENSPTIG00000005516	PRPF3	100	72.624	Panthera_tigris_altaica
ENSTNIG00000008058	prpf3	100	71.449	ENSPTRG00000001254	PRPF3	100	72.624	Pan_troglodytes
ENSTNIG00000008058	prpf3	99	54.913	ENSPTRG00000047819	-	99	54.834	Pan_troglodytes
ENSTNIG00000008058	prpf3	100	71.307	ENSPANG00000000499	PRPF3	100	72.482	Papio_anubis
ENSTNIG00000008058	prpf3	100	78.511	ENSPKIG00000010501	prpf3	99	78.511	Paramormyrops_kingsleyae
ENSTNIG00000008058	prpf3	100	72.482	ENSPSIG00000014877	PRPF3	100	72.908	Pelodiscus_sinensis
ENSTNIG00000008058	prpf3	100	72.404	ENSPMGG00000007776	prpf3	99	72.546	Periophthalmus_magnuspinnatus
ENSTNIG00000008058	prpf3	100	71.449	ENSPEMG00000011672	Prpf3	100	72.624	Peromyscus_maniculatus_bairdii
ENSTNIG00000008058	prpf3	63	69.663	ENSPMAG00000005588	prpf3	99	68.478	Petromyzon_marinus
ENSTNIG00000008058	prpf3	100	71.165	ENSPCIG00000008795	PRPF3	100	72.340	Phascolarctos_cinereus
ENSTNIG00000008058	prpf3	100	80.899	ENSPFOG00000013638	prpf3	99	81.601	Poecilia_formosa
ENSTNIG00000008058	prpf3	100	81.818	ENSPLAG00000018103	prpf3	99	82.102	Poecilia_latipinna
ENSTNIG00000008058	prpf3	100	81.161	ENSPMEG00000023546	prpf3	99	82.102	Poecilia_mexicana
ENSTNIG00000008058	prpf3	100	81.392	ENSPREG00000017216	prpf3	99	81.676	Poecilia_reticulata
ENSTNIG00000008058	prpf3	75	63.447	ENSPPYG00000018646	-	100	64.015	Pongo_abelii
ENSTNIG00000008058	prpf3	93	70.427	ENSPPYG00000000900	PRPF3	99	71.689	Pongo_abelii
ENSTNIG00000008058	prpf3	85	74.457	ENSPCAG00000014908	PRPF3	86	75.167	Procavia_capensis
ENSTNIG00000008058	prpf3	100	71.591	ENSPCOG00000013828	PRPF3	100	72.766	Propithecus_coquereli
ENSTNIG00000008058	prpf3	100	71.307	ENSPVAG00000013472	PRPF3	100	72.482	Pteropus_vampyrus
ENSTNIG00000008058	prpf3	100	82.812	ENSPNYG00000004279	prpf3	99	83.097	Pundamilia_nyererei
ENSTNIG00000008058	prpf3	100	78.809	ENSPNAG00000001799	prpf3	99	88.043	Pygocentrus_nattereri
ENSTNIG00000008058	prpf3	100	71.165	ENSRNOG00000025629	Prpf3	100	72.340	Rattus_norvegicus
ENSTNIG00000008058	prpf3	83	69.595	ENSRBIG00000028854	PRPF3	98	70.470	Rhinopithecus_bieti
ENSTNIG00000008058	prpf3	100	71.449	ENSRROG00000027464	PRPF3	100	72.624	Rhinopithecus_roxellana
ENSTNIG00000008058	prpf3	100	65.341	ENSSBOG00000033104	PRPF3	100	66.525	Saimiri_boliviensis_boliviensis
ENSTNIG00000008058	prpf3	100	70.780	ENSSHAG00000009548	PRPF3	100	71.955	Sarcophilus_harrisii
ENSTNIG00000008058	prpf3	100	78.008	ENSSFOG00015022014	prpf3	99	78.008	Scleropages_formosus
ENSTNIG00000008058	prpf3	100	82.083	ENSSMAG00000015739	prpf3	99	82.361	Scophthalmus_maximus
ENSTNIG00000008058	prpf3	100	80.085	ENSSDUG00000006840	prpf3	99	81.081	Seriola_dumerili
ENSTNIG00000008058	prpf3	100	83.079	ENSSLDG00000015423	prpf3	99	83.495	Seriola_lalandi_dorsalis
ENSTNIG00000008058	prpf3	100	71.307	ENSSARG00000011064	PRPF3	100	72.482	Sorex_araneus
ENSTNIG00000008058	prpf3	100	71.888	ENSSPUG00000000809	PRPF3	100	72.308	Sphenodon_punctatus
ENSTNIG00000008058	prpf3	100	82.419	ENSSPAG00000018721	prpf3	99	83.685	Stegastes_partitus
ENSTNIG00000008058	prpf3	100	71.449	ENSSSCG00000030119	PRPF3	100	75.089	Sus_scrofa
ENSTNIG00000008058	prpf3	100	63.404	ENSTGUG00000004552	PRPF3	100	63.598	Taeniopygia_guttata
ENSTNIG00000008058	prpf3	100	90.469	ENSTRUG00000014923	prpf3	99	90.754	Takifugu_rubripes
ENSTNIG00000008058	prpf3	81	71.365	ENSTBEG00000014072	PRPF3	88	72.991	Tupaia_belangeri
ENSTNIG00000008058	prpf3	100	66.051	ENSTTRG00000010616	PRPF3	100	67.234	Tursiops_truncatus
ENSTNIG00000008058	prpf3	80	74.866	ENSUAMG00000009345	PRPF3	100	75.089	Ursus_americanus
ENSTNIG00000008058	prpf3	100	71.449	ENSUMAG00000003720	PRPF3	100	72.624	Ursus_maritimus
ENSTNIG00000008058	prpf3	88	77.181	ENSVPAG00000005425	PRPF3	89	77.455	Vicugna_pacos
ENSTNIG00000008058	prpf3	100	71.449	ENSVVUG00000007933	PRPF3	100	72.624	Vulpes_vulpes
ENSTNIG00000008058	prpf3	100	69.817	ENSXETG00000018654	prpf3	100	71.227	Xenopus_tropicalis
ENSTNIG00000008058	prpf3	100	81.818	ENSXMAG00000016347	prpf3	99	85.870	Xiphophorus_maculatus