EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000008060 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Minus strand
Length
5267 bases
Position
chr8:8926214-8931480
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000010884tRNA_SADPF07973.143.3e-0611
ENSTNIP00000010884HGTP_anticodonPF03129.201.5e-1411
ENSTNIP00000010884tRNA-synt_2bPF00587.257.7e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000011066-2224-ENSTNIP00000010884703 (aa)-H3CRK0
Gene Model
Click here to download ENSTNIG00000008060's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008060's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000008060-9651.546ENSTNIG00000015959tars9351.546
ENSTNIG00000008060-9650.877ENSTNIG00000011928tarsl28350.877
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000008060-9650.146ENSG00000185418TARSL29938.926Homo_sapiens
ENSTNIG00000008060-6175.814ENSAPOG00000015706-9975.814Acanthochromis_polyacanthus
ENSTNIG00000008060-9550.221ENSAMEG00000003074TARSL28550.221Ailuropoda_melanoleuca
ENSTNIG00000008060-5888.916ENSACIG00000007759-9085.849Amphilophus_citrinellus
ENSTNIG00000008060-6181.395ENSAOCG00000012359-9881.395Amphiprion_ocellaris
ENSTNIG00000008060-6176.977ENSAPEG00000007512-9976.977Amphiprion_percula
ENSTNIG00000008060-9976.638ENSATEG00000023568-9976.638Anabas_testudineus
ENSTNIG00000008060-9650.731ENSAPLG00000008485TARSL29350.731Anas_platyrhynchos
ENSTNIG00000008060-9650.219ENSACAG00000003076-9850.219Anolis_carolinensis
ENSTNIG00000008060-9539.763ENSACAG00000000199TARSL28639.763Anolis_carolinensis
ENSTNIG00000008060-9646.843ENSANAG00000020687TARSL28448.031Aotus_nancymaae
ENSTNIG00000008060-10074.788ENSACLG00000020262-9975.071Astatotilapia_calliptera
ENSTNIG00000008060-9668.778ENSAMXG00000012533-9568.778Astyanax_mexicanus
ENSTNIG00000008060-9648.476ENSBTAG00000007651TARSL28448.476Bos_taurus
ENSTNIG00000008060-9649.633ENSCJAG00000017350TARSL28249.633Callithrix_jacchus
ENSTNIG00000008060-9549.853ENSCAFG00000010453TARSL28349.853Canis_familiaris
ENSTNIG00000008060-9549.706ENSCAFG00020020868TARSL29751.613Canis_lupus_dingo
ENSTNIG00000008060-8449.007ENSCHIG00000015264TARSL28149.007Capra_hircus
ENSTNIG00000008060-9648.621ENSTSYG00000004538TARSL29548.621Carlito_syrichta
ENSTNIG00000008060-9543.368ENSCAPG00000004815TARSL29843.368Cavia_aperea
ENSTNIG00000008060-9649.347ENSCPOG00000008850TARSL29549.347Cavia_porcellus
ENSTNIG00000008060-9650.000ENSCCAG00000030068TARSL28151.415Cebus_capucinus
ENSTNIG00000008060-9649.489ENSCATG00000037383TARSL28649.489Cercocebus_atys
ENSTNIG00000008060-9649.708ENSCLAG00000016873TARSL28749.708Chinchilla_lanigera
ENSTNIG00000008060-9649.635ENSCSAG00000016828TARSL28349.635Chlorocebus_sabaeus
ENSTNIG00000008060-8949.449ENSCHOG00000001319TARSL29549.449Choloepus_hoffmanni
ENSTNIG00000008060-9650.221ENSCPBG00000010792TARSL28350.221Chrysemys_picta_bellii
ENSTNIG00000008060-9649.781ENSCANG00000035438TARSL29349.781Colobus_angolensis_palliatus
ENSTNIG00000008060-9650.073ENSCGRG00001020827Tarsl28450.073Cricetulus_griseus_chok1gshd
ENSTNIG00000008060-9650.073ENSCGRG00000011398Tarsl29350.073Cricetulus_griseus_crigri
ENSTNIG00000008060-10071.875ENSCSEG00000002562-9880.930Cynoglossus_semilaevis
ENSTNIG00000008060-5886.732ENSCVAG00000009253-9783.721Cyprinodon_variegatus
ENSTNIG00000008060-6175.000ENSDARG00000075385LO017852.19875.000Danio_rerio
ENSTNIG00000008060-9648.908ENSDNOG00000046161TARSL29648.908Dasypus_novemcinctus
ENSTNIG00000008060-9649.708ENSDORG00000009653Tarsl29549.708Dipodomys_ordii
ENSTNIG00000008060-9650.000ENSEASG00005017718TARSL28450.000Equus_asinus_asinus
ENSTNIG00000008060-9650.000ENSECAG00000024315TARSL28450.000Equus_caballus
ENSTNIG00000008060-8851.929ENSEEUG00000014117TARSL29951.929Erinaceus_europaeus
ENSTNIG00000008060-9970.213ENSELUG00000013552-9970.496Esox_lucius
ENSTNIG00000008060-9650.437ENSFCAG00000008836TARSL28251.654Felis_catus
ENSTNIG00000008060-9750.507ENSFALG00000012444TARSL29150.507Ficedula_albicollis
ENSTNIG00000008060-9647.668ENSFDAG00000002767TARSL29547.668Fukomys_damarensis
ENSTNIG00000008060-5886.732ENSFHEG00000021877-7783.721Fundulus_heteroclitus
ENSTNIG00000008060-9870.954ENSGMOG00000006184-9970.312Gadus_morhua
ENSTNIG00000008060-9650.439ENSGALG00000003985TARSL28550.439Gallus_gallus
ENSTNIG00000008060-9651.679ENSGALG00000043416-9462.864Gallus_gallus
ENSTNIG00000008060-9874.674ENSGAFG00000012691-9774.819Gambusia_affinis
ENSTNIG00000008060-9878.582ENSGACG00000011734-9778.582Gasterosteus_aculeatus
ENSTNIG00000008060-9649.632ENSGAGG00000010775TARSL28349.632Gopherus_agassizii
ENSTNIG00000008060-9650.000ENSGGOG00000007839TARSL28650.000Gorilla_gorilla
ENSTNIG00000008060-10075.071ENSHBUG00000003411-9975.536Haplochromis_burtoni
ENSTNIG00000008060-9649.489ENSHGLG00000011618TARSL28549.489Heterocephalus_glaber_female
ENSTNIG00000008060-9649.489ENSHGLG00100016769TARSL29549.489Heterocephalus_glaber_male
ENSTNIG00000008060-9970.213ENSHCOG00000014119-9870.213Hippocampus_comes
ENSTNIG00000008060-5873.966ENSIPUG00000000099-9971.860Ictalurus_punctatus
ENSTNIG00000008060-9650.073ENSSTOG00000032725TARSL28450.073Ictidomys_tridecemlineatus
ENSTNIG00000008060-9875.434ENSKMAG00000001354-9775.578Kryptolebias_marmoratus
ENSTNIG00000008060-5884.521ENSLBEG00000026238-9981.628Labrus_bergylta
ENSTNIG00000008060-9649.563ENSLAFG00000011941TARSL29949.563Loxodonta_africana
ENSTNIG00000008060-9649.635ENSMFAG00000001902TARSL28250.861Macaca_fascicularis
ENSTNIG00000008060-9649.489ENSMMUG00000000278TARSL28250.704Macaca_mulatta
ENSTNIG00000008060-9649.343ENSMNEG00000034952TARSL28250.548Macaca_nemestrina
ENSTNIG00000008060-9649.343ENSMLEG00000035535TARSL29450.391Mandrillus_leucophaeus
ENSTNIG00000008060-10076.803ENSMAMG00000015032-9976.803Mastacembelus_armatus
ENSTNIG00000008060-10074.788ENSMZEG00005015989-9975.071Maylandia_zebra
ENSTNIG00000008060-8760.656ENSMGAG00000004951TARSL29660.656Meleagris_gallopavo
ENSTNIG00000008060-8759.288ENSMAUG00000015756Tarsl28359.288Mesocricetus_auratus
ENSTNIG00000008060-9649.927ENSMICG00000013039TARSL29749.927Microcebus_murinus
ENSTNIG00000008060-9850.286ENSMOCG00000014909Tarsl28650.286Microtus_ochrogaster
ENSTNIG00000008060-5890.686ENSMMOG00000016135-9290.686Mola_mola
ENSTNIG00000008060-9649.561ENSMODG00000011941TARSL28349.561Monodelphis_domestica
ENSTNIG00000008060-9677.286ENSMALG00000007340-9477.286Monopterus_albus
ENSTNIG00000008060-9650.365MGP_CAROLIEiJ_G0029834Tarsl28450.365Mus_caroli
ENSTNIG00000008060-9650.219ENSMUSG00000030515Tarsl28450.219Mus_musculus
ENSTNIG00000008060-9849.499MGP_PahariEiJ_G0013059Tarsl28649.499Mus_pahari
ENSTNIG00000008060-9650.875ENSMPUG00000011032TARSL28650.875Mustela_putorius_furo
ENSTNIG00000008060-9648.980ENSMLUG00000012870-8448.980Myotis_lucifugus
ENSTNIG00000008060-8050.174ENSMLUG00000024482-9350.174Myotis_lucifugus
ENSTNIG00000008060-9649.709ENSNGAG00000020451Tarsl28945.938Nannospalax_galili
ENSTNIG00000008060-9875.107ENSNBRG00000003429-9975.393Neolamprologus_brichardi
ENSTNIG00000008060-9649.782ENSNLEG00000000541TARSL28449.782Nomascus_leucogenys
ENSTNIG00000008060-8246.967ENSMEUG00000002935TARSL27046.967Notamacropus_eugenii
ENSTNIG00000008060-7342.578ENSOPRG00000002689-6242.578Ochotona_princeps
ENSTNIG00000008060-9650.507ENSODEG00000014454TARSL28450.507Octodon_degus
ENSTNIG00000008060-9676.696ENSONIG00000006402-9977.286Oreochromis_niloticus
ENSTNIG00000008060-9649.488ENSOANG00000013263TARSL29949.488Ornithorhynchus_anatinus
ENSTNIG00000008060-9649.564ENSOCUG00000010740TARSL29449.564Oryctolagus_cuniculus
ENSTNIG00000008060-9973.550ENSORLG00000010391-9873.975Oryzias_latipes
ENSTNIG00000008060-9974.749ENSORLG00020008928-9875.179Oryzias_latipes_hni
ENSTNIG00000008060-9974.749ENSORLG00015014897-9875.179Oryzias_latipes_hsok
ENSTNIG00000008060-9974.749ENSOMEG00000009022-9875.323Oryzias_melastigma
ENSTNIG00000008060-9648.977ENSOGAG00000014311TARSL28348.977Otolemur_garnettii
ENSTNIG00000008060-9648.331ENSOARG00000016573TARSL29548.331Ovis_aries
ENSTNIG00000008060-9650.000ENSPPAG00000040066TARSL29650.000Pan_paniscus
ENSTNIG00000008060-9650.146ENSPPRG00000017275TARSL28251.339Panthera_pardus
ENSTNIG00000008060-9650.146ENSPTIG00000015184TARSL28350.146Panthera_tigris_altaica
ENSTNIG00000008060-9650.000ENSPTRG00000007516TARSL28350.000Pan_troglodytes
ENSTNIG00000008060-9647.701ENSPANG00000022401TARSL28248.769Papio_anubis
ENSTNIG00000008060-9665.390ENSPKIG00000010658-9773.647Paramormyrops_kingsleyae
ENSTNIG00000008060-8451.438ENSPSIG00000008419TARSL29951.438Pelodiscus_sinensis
ENSTNIG00000008060-5884.767ENSPMGG00000007785-9781.860Periophthalmus_magnuspinnatus
ENSTNIG00000008060-9650.000ENSPEMG00000019852Tarsl29050.000Peromyscus_maniculatus_bairdii
ENSTNIG00000008060-9649.854ENSPCIG00000022481TARSL28349.854Phascolarctos_cinereus
ENSTNIG00000008060-9675.369ENSPFOG00000013444-9975.664Poecilia_formosa
ENSTNIG00000008060-10073.229ENSPLAG00000018145-9973.513Poecilia_latipinna
ENSTNIG00000008060-10073.654ENSPMEG00000023625-9973.938Poecilia_mexicana
ENSTNIG00000008060-5885.012ENSPREG00000017312-9982.093Poecilia_reticulata
ENSTNIG00000008060-8256.452ENSPPYG00000006830TARSL28156.452Pongo_abelii
ENSTNIG00000008060-8847.343ENSPCAG00000011132TARSL27547.343Procavia_capensis
ENSTNIG00000008060-9638.428ENSPCOG00000026095TARSL28138.439Propithecus_coquereli
ENSTNIG00000008060-8650.000ENSPVAG00000012240TARSL27550.000Pteropus_vampyrus
ENSTNIG00000008060-10075.071ENSPNYG00000004232-9975.354Pundamilia_nyererei
ENSTNIG00000008060-9867.288ENSPNAG00000002308-9867.288Pygocentrus_nattereri
ENSTNIG00000008060-6044.884ENSRNOG00000024460Tarsl27644.884Rattus_norvegicus
ENSTNIG00000008060-9649.635ENSRBIG00000035707TARSL28649.635Rhinopithecus_bieti
ENSTNIG00000008060-9649.489ENSRROG00000029492TARSL28557.203Rhinopithecus_roxellana
ENSTNIG00000008060-9649.707ENSSBOG00000029807TARSL29649.707Saimiri_boliviensis_boliviensis
ENSTNIG00000008060-9650.219ENSSHAG00000010266TARSL28950.219Sarcophilus_harrisii
ENSTNIG00000008060-9765.396ENSSFOG00015022086tars28875.339Scleropages_formosus
ENSTNIG00000008060-9677.025ENSSMAG00000015682-9677.320Scophthalmus_maximus
ENSTNIG00000008060-6186.744ENSSDUG00000007180-9786.744Seriola_dumerili
ENSTNIG00000008060-6186.744ENSSLDG00000015367-9886.744Seriola_lalandi_dorsalis
ENSTNIG00000008060-5863.882ENSSPUG00000001523TARSL29761.717Sphenodon_punctatus
ENSTNIG00000008060-9972.546ENSSPAG00000018887-9972.546Stegastes_partitus
ENSTNIG00000008060-9348.869ENSSSCG00000005781TARSL29947.947Sus_scrofa
ENSTNIG00000008060-9650.439ENSTGUG00000005726TARSL29950.439Taeniopygia_guttata
ENSTNIG00000008060-6058.588ENSTGUG00000004602-9658.588Taeniopygia_guttata
ENSTNIG00000008060-5893.366ENSTRUG00000015004-9890.000Takifugu_rubripes
ENSTNIG00000008060-7157.221ENSTBEG00000001134-7357.221Tupaia_belangeri
ENSTNIG00000008060-9649.271ENSTTRG00000016207TARSL29549.271Tursiops_truncatus
ENSTNIG00000008060-9949.086ENSUMAG00000024371TARSL29952.513Ursus_maritimus
ENSTNIG00000008060-9549.780ENSVVUG00000014742TARSL29649.780Vulpes_vulpes
ENSTNIG00000008060-5886.241ENSXCOG00000019508-9684.524Xiphophorus_couchianus
ENSTNIG00000008060-9874.530ENSXMAG00000016382-9774.819Xiphophorus_maculatus

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