EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008088 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1893 bases
Position: chr8:8669822-8671714
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010913	Fox-1_C	PF12414.8	7.8e-36	1	1
ENSTNIP00000010913	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011095	-	795	-	ENSTNIP00000010913	264 (aa)	-	H3CRM9

Gene Model

Click here to download ENSTNIG00000008088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008088	rbfox1l	51	49.650	ENSTNIG00000006271	rbfox2	61	51.049
ENSTNIG00000008088	rbfox1l	94	44.898	ENSTNIG00000002567	rbfox1	93	45.578
ENSTNIG00000008088	rbfox1l	99	60.265	ENSTNIG00000011278	rbfox3b	73	60.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008088	rbfox1l	92	84.677	ENSAPOG00000016304	rbfox1l	62	80.859	Acanthochromis_polyacanthus
ENSTNIG00000008088	rbfox1l	97	75.581	ENSACIG00000006441	rbfox1l	62	73.962	Amphilophus_citrinellus
ENSTNIG00000008088	rbfox1l	97	79.008	ENSAOCG00000020938	rbfox1l	72	77.528	Amphiprion_ocellaris
ENSTNIG00000008088	rbfox1l	97	84.733	ENSAPEG00000008232	rbfox1l	65	82.463	Amphiprion_percula
ENSTNIG00000008088	rbfox1l	97	81.395	ENSATEG00000022649	rbfox1l	64	78.788	Anabas_testudineus
ENSTNIG00000008088	rbfox1l	99	71.429	ENSACAG00000011931	-	91	71.429	Anolis_carolinensis
ENSTNIG00000008088	rbfox1l	97	82.443	ENSACLG00000021394	rbfox1l	64	80.297	Astatotilapia_calliptera
ENSTNIG00000008088	rbfox1l	97	85.000	ENSAMXG00000010470	rbfox1l	64	81.203	Astyanax_mexicanus
ENSTNIG00000008088	rbfox1l	99	66.540	ENSCPBG00000010944	-	66	67.045	Chrysemys_picta_bellii
ENSTNIG00000008088	rbfox1l	99	85.227	ENSCSEG00000018898	rbfox1l	64	83.774	Cynoglossus_semilaevis
ENSTNIG00000008088	rbfox1l	100	82.900	ENSCVAG00000007986	rbfox1l	65	80.297	Cyprinodon_variegatus
ENSTNIG00000008088	rbfox1l	99	83.835	ENSDARG00000021184	rbfox1l	65	82.397	Danio_rerio
ENSTNIG00000008088	rbfox1l	97	78.067	ENSELUG00000015077	rbfox1l	68	78.545	Esox_lucius
ENSTNIG00000008088	rbfox1l	69	92.683	ENSFHEG00000016557	rbfox1l	51	92.683	Fundulus_heteroclitus
ENSTNIG00000008088	rbfox1l	99	81.343	ENSGMOG00000005040	rbfox1l	65	79.182	Gadus_morhua
ENSTNIG00000008088	rbfox1l	100	83.643	ENSGAFG00000013211	rbfox1l	69	80.669	Gambusia_affinis
ENSTNIG00000008088	rbfox1l	99	82.463	ENSGACG00000010757	rbfox1l	65	80.669	Gasterosteus_aculeatus
ENSTNIG00000008088	rbfox1l	99	67.300	ENSGAGG00000012440	-	86	67.803	Gopherus_agassizii
ENSTNIG00000008088	rbfox1l	97	82.443	ENSHBUG00000013406	rbfox1l	64	80.297	Haplochromis_burtoni
ENSTNIG00000008088	rbfox1l	97	84.291	ENSHCOG00000020771	rbfox1l	67	83.582	Hippocampus_comes
ENSTNIG00000008088	rbfox1l	97	81.992	ENSIPUG00000000065	rbfox1l	70	79.478	Ictalurus_punctatus
ENSTNIG00000008088	rbfox1l	97	83.270	ENSKMAG00000005146	rbfox1l	64	81.413	Kryptolebias_marmoratus
ENSTNIG00000008088	rbfox1l	99	83.955	ENSLBEG00000017089	rbfox1l	65	82.528	Labrus_bergylta
ENSTNIG00000008088	rbfox1l	97	84.351	ENSMAMG00000019480	rbfox1l	65	81.784	Mastacembelus_armatus
ENSTNIG00000008088	rbfox1l	97	82.443	ENSMZEG00005016374	rbfox1l	64	80.297	Maylandia_zebra
ENSTNIG00000008088	rbfox1l	99	85.171	ENSMMOG00000016530	rbfox1l	64	85.227	Mola_mola
ENSTNIG00000008088	rbfox1l	99	83.712	ENSMALG00000009384	rbfox1l	67	81.509	Monopterus_albus
ENSTNIG00000008088	rbfox1l	97	84.170	ENSNBRG00000003346	rbfox1l	64	81.955	Neolamprologus_brichardi
ENSTNIG00000008088	rbfox1l	97	82.824	ENSONIG00000012754	rbfox1l	64	80.669	Oreochromis_niloticus
ENSTNIG00000008088	rbfox1l	97	82.824	ENSORLG00000011269	rbfox1l	65	79.926	Oryzias_latipes
ENSTNIG00000008088	rbfox1l	97	83.588	ENSORLG00020000162	rbfox1l	67	80.669	Oryzias_latipes_hni
ENSTNIG00000008088	rbfox1l	97	83.206	ENSORLG00015013464	rbfox1l	65	80.669	Oryzias_latipes_hsok
ENSTNIG00000008088	rbfox1l	97	83.588	ENSOMEG00000010584	rbfox1l	65	81.041	Oryzias_melastigma
ENSTNIG00000008088	rbfox1l	99	83.774	ENSPKIG00000012029	rbfox1l	64	81.579	Paramormyrops_kingsleyae
ENSTNIG00000008088	rbfox1l	97	77.606	ENSPMGG00000012082	rbfox1l	64	75.564	Periophthalmus_magnuspinnatus
ENSTNIG00000008088	rbfox1l	100	82.900	ENSPFOG00000009338	rbfox1l	65	81.784	Poecilia_formosa
ENSTNIG00000008088	rbfox1l	95	73.541	ENSPLAG00000012816	rbfox1l	73	71.595	Poecilia_latipinna
ENSTNIG00000008088	rbfox1l	100	76.952	ENSPMEG00000017597	rbfox1l	63	76.866	Poecilia_mexicana
ENSTNIG00000008088	rbfox1l	100	76.580	ENSPREG00000007940	rbfox1l	63	76.493	Poecilia_reticulata
ENSTNIG00000008088	rbfox1l	97	82.443	ENSPNYG00000002098	rbfox1l	64	80.297	Pundamilia_nyererei
ENSTNIG00000008088	rbfox1l	97	85.271	ENSPNAG00000001620	rbfox1l	64	81.203	Pygocentrus_nattereri
ENSTNIG00000008088	rbfox1l	98	83.525	ENSSFOG00015000675	rbfox1l	66	80.755	Scleropages_formosus
ENSTNIG00000008088	rbfox1l	99	83.582	ENSSMAG00000013090	rbfox1l	67	81.041	Scophthalmus_maximus
ENSTNIG00000008088	rbfox1l	97	78.707	ENSSDUG00000008705	rbfox1l	65	78.148	Seriola_dumerili
ENSTNIG00000008088	rbfox1l	97	78.409	ENSSLDG00000022256	rbfox1l	65	77.860	Seriola_lalandi_dorsalis
ENSTNIG00000008088	rbfox1l	97	84.733	ENSSPAG00000016620	rbfox1l	65	82.528	Stegastes_partitus
ENSTNIG00000008088	rbfox1l	94	86.400	ENSTRUG00000015905	rbfox1l	63	86.454	Takifugu_rubripes
ENSTNIG00000008088	rbfox1l	100	82.900	ENSXMAG00000023471	rbfox1l	65	80.297	Xiphophorus_maculatus