EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000008093 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2424 bases
Position: chr8:8638219-8640642
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010918	AKAP7_NLS	PF10469.9	7e-19	1	1
ENSTNIP00000003791	AKAP7_NLS	PF10469.9	1.1e-18	1	1
ENSTNIP00000001143	AKAP7_NLS	PF10469.9	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000229	-	1398	-	ENSTNIP00000003791	465 (aa)	-	H3C6C1
ENSTNIT00000011100	-	1191	-	ENSTNIP00000010918	396 (aa)	-	H3CRN4
ENSTNIT00000001538	-	1506	-	ENSTNIP00000001143	502 (aa)	-	H3BYS7

Gene Model

Click here to download ENSTNIG00000008093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008093	-	99	32.623	ENSG00000275183	LENG9	95	33.049	Homo_sapiens
ENSTNIG00000008093	-	99	61.589	ENSAPOG00000016038	-	96	59.785	Acanthochromis_polyacanthus
ENSTNIG00000008093	-	100	64.252	ENSACIG00000006238	-	99	63.785	Amphilophus_citrinellus
ENSTNIG00000008093	-	99	60.917	ENSAOCG00000012343	-	90	61.354	Amphiprion_ocellaris
ENSTNIG00000008093	-	99	61.135	ENSAPEG00000008438	-	90	61.572	Amphiprion_percula
ENSTNIG00000008093	-	99	62.642	ENSATEG00000022575	-	96	62.642	Anabas_testudineus
ENSTNIG00000008093	-	97	32.409	ENSACAG00000016906	LENG9	88	33.179	Anolis_carolinensis
ENSTNIG00000008093	-	99	70.588	ENSACLG00000021615	-	92	58.108	Astatotilapia_calliptera
ENSTNIG00000008093	-	99	46.154	ENSAMXG00000041663	-	89	45.400	Astyanax_mexicanus
ENSTNIG00000008093	-	99	43.243	ENSBTAG00000011693	LENG9	61	51.493	Bos_taurus
ENSTNIG00000008093	-	99	31.789	ENSCJAG00000001244	LENG9	95	32.558	Callithrix_jacchus
ENSTNIG00000008093	-	99	32.972	ENSCHIG00000016786	LENG9	94	31.328	Capra_hircus
ENSTNIG00000008093	-	99	33.094	ENSCPBG00000016763	LENG9	88	36.010	Chrysemys_picta_bellii
ENSTNIG00000008093	-	71	47.826	ENSCING00000013747	-	100	47.826	Ciona_intestinalis
ENSTNIG00000008093	-	100	32.305	ENSCGRG00001004238	Leng9	97	31.774	Cricetulus_griseus_chok1gshd
ENSTNIG00000008093	-	99	57.826	ENSCSEG00000018718	-	99	57.388	Cynoglossus_semilaevis
ENSTNIG00000008093	-	98	77.073	ENSCVAG00000007812	-	97	57.647	Cyprinodon_variegatus
ENSTNIG00000008093	-	96	53.731	ENSDARG00000062374	leng9	95	43.346	Danio_rerio
ENSTNIG00000008093	-	93	47.794	ENSDNOG00000005144	LENG9	96	31.288	Dasypus_novemcinctus
ENSTNIG00000008093	-	99	41.398	ENSEASG00005021529	LENG9	99	31.740	Equus_asinus_asinus
ENSTNIG00000008093	-	99	42.162	ENSECAG00000018281	LENG9	66	48.201	Equus_caballus
ENSTNIG00000008093	-	100	51.048	ENSELUG00000015268	-	89	50.095	Esox_lucius
ENSTNIG00000008093	-	99	61.013	ENSGMOG00000004924	leng9	95	67.883	Gadus_morhua
ENSTNIG00000008093	-	99	67.227	ENSGAFG00000013280	-	89	57.996	Gambusia_affinis
ENSTNIG00000008093	-	99	69.167	ENSGACG00000010726	-	100	61.261	Gasterosteus_aculeatus
ENSTNIG00000008093	-	99	33.915	ENSGAGG00000018912	LENG9	73	50.000	Gopherus_agassizii
ENSTNIG00000008093	-	99	70.588	ENSHBUG00000013531	-	92	57.774	Haplochromis_burtoni
ENSTNIG00000008093	-	99	61.343	ENSHCOG00000020683	-	94	61.751	Hippocampus_comes
ENSTNIG00000008093	-	99	52.857	ENSIPUG00000008163	leng9	90	43.662	Ictalurus_punctatus
ENSTNIG00000008093	-	96	78.155	ENSKMAG00000005354	-	99	58.777	Kryptolebias_marmoratus
ENSTNIG00000008093	-	98	77.670	ENSLBEG00000016902	-	91	60.911	Labrus_bergylta
ENSTNIG00000008093	-	99	33.902	ENSLACG00000012924	LENG9	77	46.099	Latimeria_chalumnae
ENSTNIG00000008093	-	99	79.612	ENSMAMG00000019552	-	90	60.000	Mastacembelus_armatus
ENSTNIG00000008093	-	99	70.588	ENSMZEG00005016430	-	92	58.108	Maylandia_zebra
ENSTNIG00000008093	-	99	64.560	ENSMMOG00000016554	-	94	64.560	Mola_mola
ENSTNIG00000008093	-	95	38.298	ENSMODG00000023541	-	92	53.906	Monodelphis_domestica
ENSTNIG00000008093	-	84	50.360	MGP_CAROLIEiJ_G0029106	Leng9	64	54.688	Mus_caroli
ENSTNIG00000008093	-	100	31.569	ENSMUSG00000043432	Leng9	64	54.331	Mus_musculus
ENSTNIG00000008093	-	84	50.360	MGP_PahariEiJ_G0020974	Leng9	97	31.215	Mus_pahari
ENSTNIG00000008093	-	99	40.488	MGP_SPRETEiJ_G0030159	Leng9	64	54.331	Mus_spretus
ENSTNIG00000008093	-	99	34.141	ENSMPUG00000018631	LENG9	99	32.383	Mustela_putorius_furo
ENSTNIG00000008093	-	100	61.488	ENSNBRG00000003056	-	97	60.125	Neolamprologus_brichardi
ENSTNIG00000008093	-	91	31.871	ENSNLEG00000019192	LENG9	97	31.739	Nomascus_leucogenys
ENSTNIG00000008093	-	99	68.593	ENSONIG00000012767	-	100	68.702	Oreochromis_niloticus
ENSTNIG00000008093	-	99	36.386	ENSOANG00000005166	-	95	44.516	Ornithorhynchus_anatinus
ENSTNIG00000008093	-	95	74.272	ENSORLG00000011328	-	91	57.336	Oryzias_latipes
ENSTNIG00000008093	-	95	74.272	ENSORLG00020007474	-	91	57.529	Oryzias_latipes_hni
ENSTNIG00000008093	-	95	73.786	ENSORLG00015013245	-	91	56.757	Oryzias_latipes_hsok
ENSTNIG00000008093	-	99	70.996	ENSOMEG00000010765	-	91	58.929	Oryzias_melastigma
ENSTNIG00000008093	-	82	47.368	ENSOARG00000002644	-	54	46.250	Ovis_aries
ENSTNIG00000008093	-	99	33.613	ENSPPRG00000012303	LENG9	97	33.054	Panthera_pardus
ENSTNIG00000008093	-	99	33.051	ENSPTRG00000050721	-	91	33.475	Pan_troglodytes
ENSTNIG00000008093	-	99	33.263	ENSPTRG00000011460	-	91	33.686	Pan_troglodytes
ENSTNIG00000008093	-	95	49.730	ENSPKIG00000012289	-	67	48.193	Paramormyrops_kingsleyae
ENSTNIG00000008093	-	99	55.269	ENSPMGG00000012138	-	78	85.437	Periophthalmus_magnuspinnatus
ENSTNIG00000008093	-	85	48.951	ENSPEMG00000006776	Leng9	97	33.603	Peromyscus_maniculatus_bairdii
ENSTNIG00000008093	-	99	33.085	ENSPCIG00000009911	-	79	52.344	Phascolarctos_cinereus
ENSTNIG00000008093	-	99	65.966	ENSPFOG00000009984	-	89	57.611	Poecilia_formosa
ENSTNIG00000008093	-	99	65.126	ENSPLAG00000012683	-	89	57.225	Poecilia_latipinna
ENSTNIG00000008093	-	99	66.387	ENSPMEG00000017453	-	89	57.692	Poecilia_mexicana
ENSTNIG00000008093	-	99	60.722	ENSPREG00000008082	-	93	60.722	Poecilia_reticulata
ENSTNIG00000008093	-	99	32.218	ENSPPYG00000010383	LENG9	95	32.636	Pongo_abelii
ENSTNIG00000008093	-	100	33.403	ENSPCAG00000005749	LENG9	65	54.331	Procavia_capensis
ENSTNIG00000008093	-	100	57.004	ENSPNYG00000001936	-	92	57.336	Pundamilia_nyererei
ENSTNIG00000008093	-	99	46.171	ENSPNAG00000003520	-	93	44.289	Pygocentrus_nattereri
ENSTNIG00000008093	-	80	49.275	ENSRNOG00000018621	Leng9	62	53.543	Rattus_norvegicus
ENSTNIG00000008093	-	99	50.549	ENSSFOG00015000816	-	66	51.667	Scleropages_formosus
ENSTNIG00000008093	-	91	75.243	ENSSMAG00000012988	-	91	58.302	Scophthalmus_maximus
ENSTNIG00000008093	-	78	76.821	ENSSDUG00000008877	-	87	57.203	Seriola_dumerili
ENSTNIG00000008093	-	78	76.821	ENSSLDG00000022376	-	84	56.632	Seriola_lalandi_dorsalis
ENSTNIG00000008093	-	70	54.545	ENSSPUG00000002762	LENG9	55	54.545	Sphenodon_punctatus
ENSTNIG00000008093	-	98	62.528	ENSSPAG00000016516	-	76	78.218	Stegastes_partitus
ENSTNIG00000008093	-	100	65.236	ENSTRUG00000016004	-	98	65.021	Takifugu_rubripes
ENSTNIG00000008093	-	99	34.021	ENSTTRG00000006593	LENG9	95	33.058	Tursiops_truncatus
ENSTNIG00000008093	-	74	36.932	ENSUAMG00000009573	LENG9	91	33.473	Ursus_americanus
ENSTNIG00000008093	-	99	32.936	ENSXETG00000027476	leng9	78	52.518	Xenopus_tropicalis
ENSTNIG00000008093	-	99	66.917	ENSXCOG00000019442	-	97	77.778	Xiphophorus_couchianus
ENSTNIG00000008093	-	99	65.546	ENSXMAG00000023792	-	90	57.225	Xiphophorus_maculatus