EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008154 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4615 bases
Position: chr6:2266652-2271266
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000010980	zf-C2H2	PF00096.26	6.3e-47	1	4
ENSTNIP00000010980	zf-C2H2	PF00096.26	6.3e-47	2	4
ENSTNIP00000010980	zf-C2H2	PF00096.26	6.3e-47	3	4
ENSTNIP00000010980	zf-C2H2	PF00096.26	6.3e-47	4	4
ENSTNIP00000010980	zf-met	PF12874.7	6.9e-17	1	2
ENSTNIP00000010980	zf-met	PF12874.7	6.9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011162	-	1443	-	ENSTNIP00000010980	481 (aa)	-	H3CRU6

Gene Model

Click here to download ENSTNIG00000008154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008154	-	100	35.857	ENSTNIG00000012449	zbtb48	56	35.857
ENSTNIG00000008154	-	99	30.108	ENSTNIG00000019069	-	99	35.678
ENSTNIG00000008154	-	100	36.937	ENSTNIG00000011188	-	98	36.937
ENSTNIG00000008154	-	99	37.037	ENSTNIG00000018001	e4f1	58	37.037
ENSTNIG00000008154	-	99	38.211	ENSTNIG00000000330	-	100	38.211
ENSTNIG00000008154	-	99	33.813	ENSTNIG00000008242	-	99	33.608
ENSTNIG00000008154	-	100	35.417	ENSTNIG00000005856	-	100	38.372
ENSTNIG00000008154	-	76	39.264	ENSTNIG00000017000	-	100	39.264
ENSTNIG00000008154	-	100	32.119	ENSTNIG00000010902	zbtb17	64	38.618
ENSTNIG00000008154	-	99	48.810	ENSTNIG00000000277	-	96	48.810
ENSTNIG00000008154	-	99	34.483	ENSTNIG00000010722	GZF1	55	34.483
ENSTNIG00000008154	-	99	32.819	ENSTNIG00000005798	zbtb16a	59	34.286
ENSTNIG00000008154	-	99	34.091	ENSTNIG00000002343	-	87	35.470
ENSTNIG00000008154	-	99	36.900	ENSTNIG00000002344	-	100	36.900
ENSTNIG00000008154	-	72	35.556	ENSTNIG00000003865	-	66	35.556
ENSTNIG00000008154	-	99	30.519	ENSTNIG00000001164	ZNF628	99	30.519
ENSTNIG00000008154	-	99	46.835	ENSTNIG00000005023	-	99	46.835
ENSTNIG00000008154	-	99	39.007	ENSTNIG00000008200	-	100	39.007
ENSTNIG00000008154	-	94	39.394	ENSTNIG00000003834	gfi1b	57	43.750
ENSTNIG00000008154	-	99	44.048	ENSTNIG00000000320	-	99	44.048
ENSTNIG00000008154	-	100	37.500	ENSTNIG00000005479	-	99	37.500
ENSTNIG00000008154	-	96	49.624	ENSTNIG00000000934	-	100	49.624
ENSTNIG00000008154	-	52	47.561	ENSTNIG00000003479	-	100	47.561
ENSTNIG00000008154	-	91	36.364	ENSTNIG00000008504	snai2	61	36.364
ENSTNIG00000008154	-	100	30.046	ENSTNIG00000001159	si:dkey-89b17.4	99	34.568
ENSTNIG00000008154	-	99	32.159	ENSTNIG00000001401	zbtb47b	53	32.159
ENSTNIG00000008154	-	99	35.404	ENSTNIG00000018984	-	99	33.747
ENSTNIG00000008154	-	99	30.725	ENSTNIG00000000528	-	100	33.193
ENSTNIG00000008154	-	99	33.166	ENSTNIG00000001921	-	68	33.166
ENSTNIG00000008154	-	78	36.667	ENSTNIG00000018384	scrt1b	52	36.667
ENSTNIG00000008154	-	100	31.383	ENSTNIG00000008100	-	99	31.383
ENSTNIG00000008154	-	99	38.750	ENSTNIG00000011367	znf710b	52	36.017
ENSTNIG00000008154	-	79	36.170	ENSTNIG00000012473	scrt2	67	36.170
ENSTNIG00000008154	-	99	35.503	ENSTNIG00000003979	-	99	33.495
ENSTNIG00000008154	-	99	37.500	ENSTNIG00000009831	-	95	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008154	-	71	39.062	ENSACIG00000017166	-	60	39.062	Amphilophus_citrinellus
ENSTNIG00000008154	-	100	37.324	ENSAPEG00000007889	-	90	37.324	Amphiprion_percula
ENSTNIG00000008154	-	99	35.000	ENSAPEG00000019755	-	97	35.000	Amphiprion_percula
ENSTNIG00000008154	-	52	35.673	ENSAMXG00000032845	-	60	35.673	Astyanax_mexicanus
ENSTNIG00000008154	-	53	33.577	WBGene00021374	Y37E11B.1	91	33.577	Caenorhabditis_elegans
ENSTNIG00000008154	-	53	34.228	ENSCING00000003384	-	98	31.707	Ciona_intestinalis
ENSTNIG00000008154	-	58	39.252	ENSCSAVG00000003895	-	100	39.252	Ciona_savignyi
ENSTNIG00000008154	-	99	37.220	ENSCSAVG00000009574	-	99	37.220	Ciona_savignyi
ENSTNIG00000008154	-	99	31.128	ENSCSAVG00000006729	-	73	31.128	Ciona_savignyi
ENSTNIG00000008154	-	100	31.618	ENSCSEG00000005491	-	90	31.618	Cynoglossus_semilaevis
ENSTNIG00000008154	-	99	40.541	ENSCVAG00000002295	-	80	34.653	Cyprinodon_variegatus
ENSTNIG00000008154	-	53	37.069	ENSCVAG00000019574	-	72	37.069	Cyprinodon_variegatus
ENSTNIG00000008154	-	85	39.259	FBgn0028895	CG17328	54	39.259	Drosophila_melanogaster
ENSTNIG00000008154	-	99	33.043	FBgn0037722	CG8319	63	33.043	Drosophila_melanogaster
ENSTNIG00000008154	-	99	33.523	FBgn0033934	CG17385	89	33.523	Drosophila_melanogaster
ENSTNIG00000008154	-	100	38.028	FBgn0030012	CG18262	63	38.028	Drosophila_melanogaster
ENSTNIG00000008154	-	99	42.188	ENSEBUG00000008392	-	69	40.343	Eptatretus_burgeri
ENSTNIG00000008154	-	100	49.438	ENSEBUG00000000735	-	98	48.905	Eptatretus_burgeri
ENSTNIG00000008154	-	99	33.828	ENSEBUG00000004841	-	86	40.964	Eptatretus_burgeri
ENSTNIG00000008154	-	99	37.931	ENSEBUG00000015522	-	69	37.931	Eptatretus_burgeri
ENSTNIG00000008154	-	100	30.579	ENSELUG00000010454	-	64	30.579	Esox_lucius
ENSTNIG00000008154	-	100	31.984	ENSELUG00000020794	-	64	31.122	Esox_lucius
ENSTNIG00000008154	-	99	34.127	ENSFHEG00000012990	-	86	34.127	Fundulus_heteroclitus
ENSTNIG00000008154	-	99	40.426	ENSFHEG00000013644	-	80	34.653	Fundulus_heteroclitus
ENSTNIG00000008154	-	99	30.667	ENSFHEG00000020889	-	84	33.878	Fundulus_heteroclitus
ENSTNIG00000008154	-	99	43.038	ENSGACG00000018415	-	99	43.038	Gasterosteus_aculeatus
ENSTNIG00000008154	-	99	36.047	ENSHCOG00000014881	-	78	36.047	Hippocampus_comes
ENSTNIG00000008154	-	99	38.824	ENSHCOG00000008181	-	72	38.824	Hippocampus_comes
ENSTNIG00000008154	-	99	36.025	ENSHCOG00000017437	-	82	38.037	Hippocampus_comes
ENSTNIG00000008154	-	99	38.889	ENSHCOG00000001313	-	58	38.889	Hippocampus_comes
ENSTNIG00000008154	-	88	30.213	ENSIPUG00000013526	-	85	30.213	Ictalurus_punctatus
ENSTNIG00000008154	-	99	50.898	ENSIPUG00000002510	-	58	50.898	Ictalurus_punctatus
ENSTNIG00000008154	-	99	36.245	ENSKMAG00000012909	-	68	31.694	Kryptolebias_marmoratus
ENSTNIG00000008154	-	52	38.462	ENSLBEG00000026573	-	63	38.462	Labrus_bergylta
ENSTNIG00000008154	-	77	32.653	ENSMALG00000013521	-	66	32.653	Monopterus_albus
ENSTNIG00000008154	-	94	32.143	ENSONIG00000009894	-	100	32.143	Oreochromis_niloticus
ENSTNIG00000008154	-	99	45.588	ENSONIG00000003471	-	97	45.588	Oreochromis_niloticus
ENSTNIG00000008154	-	100	34.518	ENSONIG00000003224	-	93	34.518	Oreochromis_niloticus
ENSTNIG00000008154	-	100	39.873	ENSONIG00000007812	-	99	39.873	Oreochromis_niloticus
ENSTNIG00000008154	-	100	31.667	ENSONIG00000016416	-	98	32.411	Oreochromis_niloticus
ENSTNIG00000008154	-	99	32.886	ENSORLG00015018254	-	89	32.886	Oryzias_latipes_hsok
ENSTNIG00000008154	-	99	34.911	ENSOMEG00000017673	-	69	34.911	Oryzias_melastigma
ENSTNIG00000008154	-	100	32.018	ENSPMGG00000012289	-	71	32.018	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	100	39.526	ENSPMGG00000022524	-	95	39.526	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	99	34.783	ENSPMGG00000000243	-	87	34.783	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	100	61.709	ENSPMGG00000013602	-	93	61.709	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	77	34.014	ENSPMGG00000000489	-	78	34.014	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	95	34.731	ENSPMGG00000019842	-	69	34.731	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	100	43.357	ENSPMGG00000000458	-	94	43.357	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	99	38.318	ENSPMGG00000000218	-	59	38.053	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	100	35.507	ENSPMGG00000010664	-	93	35.507	Periophthalmus_magnuspinnatus
ENSTNIG00000008154	-	99	42.029	ENSPMAG00000007983	-	99	42.029	Petromyzon_marinus
ENSTNIG00000008154	-	99	39.286	ENSPFOG00000002879	-	100	39.286	Poecilia_formosa
ENSTNIG00000008154	-	89	43.038	ENSPFOG00000020691	-	85	43.038	Poecilia_formosa
ENSTNIG00000008154	-	75	40.449	ENSPLAG00000011254	-	64	40.449	Poecilia_latipinna
ENSTNIG00000008154	-	99	33.579	ENSPLAG00000006174	-	71	31.358	Poecilia_latipinna
ENSTNIG00000008154	-	99	34.199	ENSPMEG00000022676	-	100	34.199	Poecilia_mexicana
ENSTNIG00000008154	-	75	39.744	ENSPMEG00000007503	-	69	39.744	Poecilia_mexicana
ENSTNIG00000008154	-	99	43.636	ENSPREG00000016204	-	70	31.234	Poecilia_reticulata
ENSTNIG00000008154	-	75	39.744	ENSPREG00000015352	-	60	39.744	Poecilia_reticulata
ENSTNIG00000008154	-	96	31.618	ENSSMAG00000000404	-	84	31.618	Scophthalmus_maximus
ENSTNIG00000008154	-	99	75.926	ENSSMAG00000001359	-	95	75.926	Scophthalmus_maximus
ENSTNIG00000008154	-	99	48.507	ENSSDUG00000000946	-	98	37.104	Seriola_dumerili
ENSTNIG00000008154	-	64	36.538	ENSSDUG00000000871	-	91	36.538	Seriola_dumerili
ENSTNIG00000008154	-	65	40.476	ENSSLDG00000002515	-	79	40.000	Seriola_lalandi_dorsalis
ENSTNIG00000008154	-	93	32.683	ENSSLDG00000000464	-	55	32.683	Seriola_lalandi_dorsalis
ENSTNIG00000008154	-	98	77.143	ENSSLDG00000015796	-	79	77.143	Seriola_lalandi_dorsalis
ENSTNIG00000008154	-	56	44.000	ENSSPAG00000009405	-	57	44.000	Stegastes_partitus
ENSTNIG00000008154	-	100	83.861	ENSTRUG00000019941	-	54	83.861	Takifugu_rubripes
ENSTNIG00000008154	-	88	39.326	ENSXMAG00000022242	-	83	39.326	Xiphophorus_maculatus