EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008194 (Gene tree)
Gene ID: -
Gene Symbol: prdm14
Alias: fc16b12|wu:fc16b12
Full Name: PR domain containing 14
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2354 bases
Position: chr6:3124716-3127069
Accession: ZDB-GENE-030131-2709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011020	zf-C2H2	PF00096.26	8.5e-20	1	2
ENSTNIP00000011020	zf-C2H2	PF00096.26	8.5e-20	2	2
ENSTNIP00000011020	zf-met	PF12874.7	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011202	-	1125	-	ENSTNIP00000011020	375 (aa)	-	H3CRY6

Gene Model

Click here to download ENSTNIG00000008194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008194	prdm14	81	31.792	ENSTNIG00000005901	prdm5	84	31.792
ENSTNIG00000008194	prdm14	58	39.823	ENSTNIG00000003979	-	99	39.823
ENSTNIG00000008194	prdm14	78	30.449	ENSTNIG00000001921	-	91	30.449
ENSTNIG00000008194	prdm14	90	35.537	ENSTNIG00000004148	-	61	35.537
ENSTNIG00000008194	prdm14	54	30.178	ENSTNIG00000000073	znf646	99	30.178
ENSTNIG00000008194	prdm14	50	38.182	ENSTNIG00000008504	snai2	60	38.182
ENSTNIG00000008194	prdm14	93	40.476	ENSTNIG00000009020	prdm12b	68	31.077
ENSTNIG00000008194	prdm14	84	35.537	ENSTNIG00000008583	PRDM15	69	35.537
ENSTNIG00000008194	prdm14	57	48.182	ENSTNIG00000005023	-	99	48.182
ENSTNIG00000008194	prdm14	86	37.063	ENSTNIG00000014443	prdm9	88	37.063
ENSTNIG00000008194	prdm14	61	33.929	ENSTNIG00000005798	zbtb16a	56	33.929
ENSTNIG00000008194	prdm14	99	40.476	ENSTNIG00000005859	-	90	40.476
ENSTNIG00000008194	prdm14	87	35.789	ENSTNIG00000011188	-	96	35.789
ENSTNIG00000008194	prdm14	50	37.143	ENSTNIG00000002343	-	83	37.143
ENSTNIG00000008194	prdm14	52	39.766	ENSTNIG00000018984	-	99	39.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008194	prdm14	99	72.727	ENSACIG00000022698	prdm14	61	77.403	Amphilophus_citrinellus
ENSTNIG00000008194	prdm14	99	70.130	ENSACLG00000025407	prdm14	61	76.823	Astatotilapia_calliptera
ENSTNIG00000008194	prdm14	99	72.727	ENSAMXG00000000512	prdm14	79	72.727	Astyanax_mexicanus
ENSTNIG00000008194	prdm14	100	66.667	ENSBTAG00000000060	PRDM14	66	66.667	Bos_taurus
ENSTNIG00000008194	prdm14	100	66.053	ENSCHIG00000009297	PRDM14	66	66.053	Capra_hircus
ENSTNIG00000008194	prdm14	99	66.223	ENSTSYG00000010610	PRDM14	91	66.223	Carlito_syrichta
ENSTNIG00000008194	prdm14	100	64.644	ENSCPOG00000027176	PRDM14	73	64.644	Cavia_porcellus
ENSTNIG00000008194	prdm14	100	56.349	ENSCCAG00000026032	PRDM14	64	58.466	Cebus_capucinus
ENSTNIG00000008194	prdm14	100	63.228	ENSCLAG00000001937	PRDM14	66	63.228	Chinchilla_lanigera
ENSTNIG00000008194	prdm14	99	73.867	ENSGACG00000002829	prdm14	73	73.867	Gasterosteus_aculeatus
ENSTNIG00000008194	prdm14	99	87.166	ENSHBUG00000019660	prdm14	62	87.166	Haplochromis_burtoni
ENSTNIG00000008194	prdm14	99	87.166	ENSMZEG00005021597	prdm14	62	87.166	Maylandia_zebra
ENSTNIG00000008194	prdm14	99	87.166	ENSNBRG00000023669	prdm14	62	87.166	Neolamprologus_brichardi
ENSTNIG00000008194	prdm14	100	64.550	ENSODEG00000003245	PRDM14	67	64.550	Octodon_degus
ENSTNIG00000008194	prdm14	100	66.053	ENSOARG00000003528	PRDM14	77	66.053	Ovis_aries
ENSTNIG00000008194	prdm14	99	86.898	ENSPNYG00000001938	prdm14	62	86.898	Pundamilia_nyererei
ENSTNIG00000008194	prdm14	99	86.595	ENSSDUG00000013311	prdm14	62	86.595	Seriola_dumerili
ENSTNIG00000008194	prdm14	99	86.595	ENSSLDG00000006506	prdm14	63	86.595	Seriola_lalandi_dorsalis