EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008200 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1122 bases
Position: chr8:940067-941188
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	1	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	2	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	3	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	4	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	5	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	6	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	7	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	8	9
ENSTNIP00000011027	zf-C2H2	PF00096.26	4.3e-52	9	9
ENSTNIP00000011027	zf-met	PF12874.7	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011209	-	990	-	ENSTNIP00000011027	330 (aa)	-	H3CRZ3

Gene Model

Click here to download ENSTNIG00000008200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008200	-	100	42.683	ENSTNIG00000018984	-	98	42.683
ENSTNIG00000008200	-	99	39.837	ENSTNIG00000009831	-	93	37.729
ENSTNIG00000008200	-	100	36.808	ENSTNIG00000005023	-	100	36.503
ENSTNIG00000008200	-	99	36.434	ENSTNIG00000010722	GZF1	51	36.434
ENSTNIG00000008200	-	93	39.759	ENSTNIG00000003834	gfi1b	51	40.909
ENSTNIG00000008200	-	100	34.545	ENSTNIG00000014443	prdm9	67	34.385
ENSTNIG00000008200	-	100	39.697	ENSTNIG00000003979	-	99	39.697
ENSTNIG00000008200	-	97	42.066	ENSTNIG00000000330	-	100	42.066
ENSTNIG00000008200	-	100	45.395	ENSTNIG00000005856	-	99	45.395
ENSTNIG00000008200	-	100	41.808	ENSTNIG00000000277	-	98	41.104
ENSTNIG00000008200	-	99	32.653	ENSTNIG00000005047	si:ch211-216l23.1	90	32.653
ENSTNIG00000008200	-	100	35.507	ENSTNIG00000000073	znf646	97	35.507
ENSTNIG00000008200	-	99	42.927	ENSTNIG00000000934	-	100	44.286
ENSTNIG00000008200	-	100	41.333	ENSTNIG00000002343	-	83	41.333
ENSTNIG00000008200	-	100	39.516	ENSTNIG00000002344	-	100	39.516
ENSTNIG00000008200	-	100	37.402	ENSTNIG00000008100	-	100	37.402
ENSTNIG00000008200	-	100	40.606	ENSTNIG00000017000	-	100	40.606
ENSTNIG00000008200	-	90	43.721	ENSTNIG00000000320	-	100	44.444
ENSTNIG00000008200	-	99	38.372	ENSTNIG00000005479	-	99	38.372
ENSTNIG00000008200	-	90	46.914	ENSTNIG00000003479	-	98	46.914
ENSTNIG00000008200	-	90	43.396	ENSTNIG00000008504	snai2	52	43.396
ENSTNIG00000008200	-	99	33.333	ENSTNIG00000001159	si:dkey-89b17.4	99	33.333
ENSTNIG00000008200	-	100	39.007	ENSTNIG00000008154	-	99	39.007
ENSTNIG00000008200	-	99	39.394	ENSTNIG00000018384	scrt1b	55	39.394
ENSTNIG00000008200	-	100	33.333	ENSTNIG00000003880	znf319b	85	35.341
ENSTNIG00000008200	-	100	39.462	ENSTNIG00000000528	-	96	36.653
ENSTNIG00000008200	-	100	35.714	ENSTNIG00000005901	prdm5	74	35.714
ENSTNIG00000008200	-	100	41.026	ENSTNIG00000008242	-	99	41.045
ENSTNIG00000008200	-	100	34.069	ENSTNIG00000011367	znf710b	52	35.204
ENSTNIG00000008200	-	99	37.121	ENSTNIG00000012473	scrt2	55	37.037
ENSTNIG00000008200	-	74	44.643	ENSTNIG00000013008	-	99	41.667
ENSTNIG00000008200	-	100	33.469	ENSTNIG00000004148	-	50	33.469
ENSTNIG00000008200	-	99	35.928	ENSTNIG00000001921	-	63	35.928
ENSTNIG00000008200	-	99	38.667	ENSTNIG00000012449	zbtb48	51	38.667
ENSTNIG00000008200	-	100	31.455	ENSTNIG00000011746	hinfp	51	31.455
ENSTNIG00000008200	-	99	36.576	ENSTNIG00000005798	zbtb16a	58	36.576
ENSTNIG00000008200	-	99	41.071	ENSTNIG00000005051	znf341	57	41.071
ENSTNIG00000008200	-	100	39.353	ENSTNIG00000019069	-	100	41.691
ENSTNIG00000008200	-	100	37.456	ENSTNIG00000011188	-	98	37.456
ENSTNIG00000008200	-	100	43.373	ENSTNIG00000018001	e4f1	61	43.373
ENSTNIG00000008200	-	99	34.024	ENSTNIG00000007805	zbtb41	51	34.024
ENSTNIG00000008200	-	98	39.604	ENSTNIG00000003865	-	56	39.604
ENSTNIG00000008200	-	100	39.935	ENSTNIG00000001164	ZNF628	98	43.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008200	-	100	40.856	ENSAPOG00000004328	-	87	40.856	Acanthochromis_polyacanthus
ENSTNIG00000008200	-	100	40.000	ENSAPOG00000013511	-	53	40.000	Acanthochromis_polyacanthus
ENSTNIG00000008200	-	100	41.071	ENSACIG00000010739	-	79	41.071	Amphilophus_citrinellus
ENSTNIG00000008200	-	100	41.569	ENSAOCG00000007045	-	83	41.569	Amphiprion_ocellaris
ENSTNIG00000008200	-	100	40.359	ENSAPEG00000016483	-	59	40.359	Amphiprion_percula
ENSTNIG00000008200	-	100	42.795	ENSAPEG00000001596	-	75	41.622	Amphiprion_percula
ENSTNIG00000008200	-	99	40.979	ENSATEG00000006085	-	86	40.979	Anabas_testudineus
ENSTNIG00000008200	-	100	47.967	ENSACAG00000000082	-	99	47.967	Anolis_carolinensis
ENSTNIG00000008200	-	99	47.347	ENSACAG00000025537	-	96	47.347	Anolis_carolinensis
ENSTNIG00000008200	-	100	45.914	ENSAMXG00000036257	-	97	45.914	Astyanax_mexicanus
ENSTNIG00000008200	-	100	47.115	ENSAMXG00000035145	-	63	47.115	Astyanax_mexicanus
ENSTNIG00000008200	-	100	43.841	ENSAMXG00000032237	-	95	43.841	Astyanax_mexicanus
ENSTNIG00000008200	-	100	43.206	ENSAMXG00000026143	-	97	43.206	Astyanax_mexicanus
ENSTNIG00000008200	-	99	46.591	ENSAMXG00000035949	-	76	46.591	Astyanax_mexicanus
ENSTNIG00000008200	-	100	48.387	ENSAMXG00000033013	-	84	48.387	Astyanax_mexicanus
ENSTNIG00000008200	-	100	46.199	ENSAMXG00000012873	-	95	44.531	Astyanax_mexicanus
ENSTNIG00000008200	-	100	39.144	ENSCVAG00000011235	-	89	39.144	Cyprinodon_variegatus
ENSTNIG00000008200	-	100	43.598	ENSELUG00000021287	-	83	43.598	Esox_lucius
ENSTNIG00000008200	-	99	41.924	ENSELUG00000013357	-	83	41.924	Esox_lucius
ENSTNIG00000008200	-	99	50.327	ENSELUG00000013844	-	89	48.214	Esox_lucius
ENSTNIG00000008200	-	100	38.554	ENSFHEG00000019915	-	74	38.554	Fundulus_heteroclitus
ENSTNIG00000008200	-	100	39.300	ENSGMOG00000003238	-	99	39.300	Gadus_morhua
ENSTNIG00000008200	-	100	37.764	ENSGAFG00000003150	-	87	54.054	Gambusia_affinis
ENSTNIG00000008200	-	100	41.048	ENSGAFG00000012977	-	87	41.048	Gambusia_affinis
ENSTNIG00000008200	-	98	47.573	ENSIPUG00000021556	-	94	47.573	Ictalurus_punctatus
ENSTNIG00000008200	-	99	42.381	ENSIPUG00000004428	-	77	42.381	Ictalurus_punctatus
ENSTNIG00000008200	-	99	44.479	ENSIPUG00000006916	-	75	44.479	Ictalurus_punctatus
ENSTNIG00000008200	-	100	40.856	ENSKMAG00000004988	-	89	40.856	Kryptolebias_marmoratus
ENSTNIG00000008200	-	100	45.455	ENSLOCG00000014366	-	98	42.029	Lepisosteus_oculatus
ENSTNIG00000008200	-	100	42.435	ENSLOCG00000014144	-	100	42.435	Lepisosteus_oculatus
ENSTNIG00000008200	-	100	45.977	ENSMAMG00000019301	-	98	45.366	Mastacembelus_armatus
ENSTNIG00000008200	-	100	38.066	ENSMAMG00000016542	-	63	38.066	Mastacembelus_armatus
ENSTNIG00000008200	-	100	44.375	ENSMMOG00000009852	-	86	44.375	Mola_mola
ENSTNIG00000008200	-	100	40.889	ENSMALG00000005554	-	93	38.066	Monopterus_albus
ENSTNIG00000008200	-	99	43.750	ENSOCUG00000005876	-	100	38.348	Oryctolagus_cuniculus
ENSTNIG00000008200	-	100	39.024	ENSPKIG00000006616	-	58	39.024	Paramormyrops_kingsleyae
ENSTNIG00000008200	-	99	38.889	ENSPMGG00000017633	-	89	38.889	Periophthalmus_magnuspinnatus
ENSTNIG00000008200	-	100	40.467	ENSPFOG00000010682	-	99	39.512	Poecilia_formosa
ENSTNIG00000008200	-	100	38.991	ENSPLAG00000002892	-	76	38.991	Poecilia_latipinna
ENSTNIG00000008200	-	100	40.467	ENSPMEG00000001399	-	92	40.467	Poecilia_mexicana
ENSTNIG00000008200	-	99	41.228	ENSPREG00000002582	-	61	38.693	Poecilia_reticulata
ENSTNIG00000008200	-	100	40.467	ENSPREG00000001386	-	92	40.467	Poecilia_reticulata
ENSTNIG00000008200	-	100	45.455	ENSPNAG00000000219	-	85	42.424	Pygocentrus_nattereri
ENSTNIG00000008200	-	100	41.228	ENSPNAG00000025570	-	80	41.228	Pygocentrus_nattereri
ENSTNIG00000008200	-	100	46.218	ENSPNAG00000015116	-	66	46.218	Pygocentrus_nattereri
ENSTNIG00000008200	-	100	40.798	ENSSFOG00015006108	-	58	40.798	Scleropages_formosus
ENSTNIG00000008200	-	99	48.611	ENSSMAG00000009115	-	91	53.191	Scophthalmus_maximus
ENSTNIG00000008200	-	100	40.856	ENSSDUG00000006463	-	88	40.856	Seriola_dumerili
ENSTNIG00000008200	-	99	45.122	ENSSDUG00000002195	-	90	40.415	Seriola_dumerili
ENSTNIG00000008200	-	98	43.421	ENSSLDG00000020727	-	99	37.430	Seriola_lalandi_dorsalis
ENSTNIG00000008200	-	100	46.512	ENSSLDG00000006724	-	92	46.512	Seriola_lalandi_dorsalis
ENSTNIG00000008200	-	100	43.750	ENSSPAG00000021008	-	93	42.553	Stegastes_partitus
ENSTNIG00000008200	-	99	37.729	ENSSPAG00000012960	-	80	37.729	Stegastes_partitus
ENSTNIG00000008200	-	100	85.027	ENSTRUG00000021675	-	77	85.027	Takifugu_rubripes
ENSTNIG00000008200	-	99	43.333	ENSTRUG00000005321	-	96	41.549	Takifugu_rubripes
ENSTNIG00000008200	-	100	47.706	ENSXETG00000006575	znf420	81	43.189	Xenopus_tropicalis
ENSTNIG00000008200	-	99	45.455	ENSXCOG00000009665	-	84	45.455	Xiphophorus_couchianus
ENSTNIG00000008200	-	100	41.048	ENSXMAG00000028625	-	92	41.048	Xiphophorus_maculatus