EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008242 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5604 bases
Position: chr18:9913408-9919011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	1	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	2	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	3	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	4	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	5	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	6	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	7	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	8	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	9	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	10	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	11	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	12	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	13	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	14	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	15	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	16	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	17	18
ENSTNIP00000011072	zf-C2H2	PF00096.26	1.4e-101	18	18
ENSTNIP00000011072	zf-met	PF12874.7	1e-26	1	4
ENSTNIP00000011072	zf-met	PF12874.7	1e-26	2	4
ENSTNIP00000011072	zf-met	PF12874.7	1e-26	3	4
ENSTNIP00000011072	zf-met	PF12874.7	1e-26	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011254	-	1791	-	ENSTNIP00000011072	597 (aa)	-	H3CS38

Gene Model

Click here to download ENSTNIG00000008242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008242	-	100	37.941	ENSTNIG00000011188	-	98	37.941
ENSTNIG00000008242	-	99	41.045	ENSTNIG00000008200	-	100	41.026
ENSTNIG00000008242	-	99	34.259	ENSTNIG00000000073	znf646	98	34.649
ENSTNIG00000008242	-	97	39.574	ENSTNIG00000005798	zbtb16a	62	39.574
ENSTNIG00000008242	-	99	35.329	ENSTNIG00000005901	prdm5	76	35.329
ENSTNIG00000008242	-	99	51.020	ENSTNIG00000012460	sall4	60	47.273
ENSTNIG00000008242	-	99	37.221	ENSTNIG00000008100	-	100	37.221
ENSTNIG00000008242	-	100	38.976	ENSTNIG00000011367	znf710b	54	38.976
ENSTNIG00000008242	-	99	39.384	ENSTNIG00000010722	GZF1	54	39.384
ENSTNIG00000008242	-	99	44.099	ENSTNIG00000000651	gfi1ab	52	44.099
ENSTNIG00000008242	-	99	33.608	ENSTNIG00000008154	-	99	33.813
ENSTNIG00000008242	-	99	43.066	ENSTNIG00000001164	ZNF628	100	43.066
ENSTNIG00000008242	-	98	47.059	ENSTNIG00000003479	-	100	47.059
ENSTNIG00000008242	-	99	39.623	ENSTNIG00000005023	-	99	41.299
ENSTNIG00000008242	-	99	43.956	ENSTNIG00000002344	-	100	43.956
ENSTNIG00000008242	-	99	42.250	ENSTNIG00000002343	-	92	42.250
ENSTNIG00000008242	-	99	39.286	ENSTNIG00000009831	-	96	38.340
ENSTNIG00000008242	-	99	44.574	ENSTNIG00000005479	-	99	44.574
ENSTNIG00000008242	-	99	36.250	ENSTNIG00000018384	scrt1b	78	36.250
ENSTNIG00000008242	-	99	42.857	ENSTNIG00000001159	si:dkey-89b17.4	99	42.857
ENSTNIG00000008242	-	100	41.748	ENSTNIG00000007311	snai1a	51	40.777
ENSTNIG00000008242	-	99	39.416	ENSTNIG00000008504	snai2	59	39.416
ENSTNIG00000008242	-	99	48.134	ENSTNIG00000000330	-	100	48.134
ENSTNIG00000008242	-	99	44.872	ENSTNIG00000018001	e4f1	63	38.542
ENSTNIG00000008242	-	100	38.415	ENSTNIG00000014443	prdm9	78	38.415
ENSTNIG00000008242	-	99	35.878	ENSTNIG00000003865	-	89	35.878
ENSTNIG00000008242	-	99	38.312	ENSTNIG00000012449	zbtb48	53	38.141
ENSTNIG00000008242	-	99	46.369	ENSTNIG00000000277	-	94	46.369
ENSTNIG00000008242	-	99	36.842	ENSTNIG00000007805	zbtb41	58	33.676
ENSTNIG00000008242	-	97	38.326	ENSTNIG00000016189	zbtb16b	52	38.326
ENSTNIG00000008242	-	99	40.909	ENSTNIG00000018984	-	99	40.940
ENSTNIG00000008242	-	78	47.826	ENSTNIG00000013008	-	98	41.071
ENSTNIG00000008242	-	99	43.750	ENSTNIG00000003834	gfi1b	68	43.750
ENSTNIG00000008242	-	99	40.816	ENSTNIG00000003979	-	99	40.556
ENSTNIG00000008242	-	99	38.235	ENSTNIG00000000528	-	99	36.134
ENSTNIG00000008242	-	99	46.392	ENSTNIG00000000934	-	99	46.392
ENSTNIG00000008242	-	99	34.682	ENSTNIG00000003880	znf319b	87	33.638
ENSTNIG00000008242	-	99	42.553	ENSTNIG00000010902	zbtb17	56	40.580
ENSTNIG00000008242	-	99	37.975	ENSTNIG00000012473	scrt2	56	37.975
ENSTNIG00000008242	-	99	35.398	ENSTNIG00000008018	-	52	37.059
ENSTNIG00000008242	-	99	46.392	ENSTNIG00000000320	-	100	46.392
ENSTNIG00000008242	-	99	37.158	ENSTNIG00000019069	-	100	37.742
ENSTNIG00000008242	-	97	33.117	ENSTNIG00000011746	hinfp	63	33.117
ENSTNIG00000008242	-	99	36.538	ENSTNIG00000001921	-	64	36.095
ENSTNIG00000008242	-	99	43.558	ENSTNIG00000017000	-	100	43.558
ENSTNIG00000008242	-	99	47.321	ENSTNIG00000005856	-	99	47.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008242	-	100	91.892	ENSAPOG00000002213	-	86	91.892	Acanthochromis_polyacanthus
ENSTNIG00000008242	-	99	84.965	ENSACIG00000013163	-	92	84.965	Amphilophus_citrinellus
ENSTNIG00000008242	-	99	47.500	ENSACIG00000013149	-	81	48.363	Amphilophus_citrinellus
ENSTNIG00000008242	-	100	91.892	ENSAOCG00000013124	-	86	91.892	Amphiprion_ocellaris
ENSTNIG00000008242	-	100	91.892	ENSAPEG00000009997	-	86	91.892	Amphiprion_percula
ENSTNIG00000008242	-	100	86.723	ENSATEG00000004127	-	98	81.013	Anabas_testudineus
ENSTNIG00000008242	-	100	92.278	ENSACLG00000005708	-	86	92.278	Astatotilapia_calliptera
ENSTNIG00000008242	-	99	76.796	ENSCVAG00000014734	-	98	53.984	Cyprinodon_variegatus
ENSTNIG00000008242	-	99	90.226	ENSFHEG00000014060	-	78	90.226	Fundulus_heteroclitus
ENSTNIG00000008242	-	99	74.306	ENSGMOG00000017526	-	98	74.306	Gadus_morhua
ENSTNIG00000008242	-	99	93.952	ENSGAFG00000011174	-	86	93.952	Gambusia_affinis
ENSTNIG00000008242	-	99	85.093	ENSGACG00000019550	-	100	85.093	Gasterosteus_aculeatus
ENSTNIG00000008242	-	100	92.278	ENSHBUG00000006662	-	86	92.278	Haplochromis_burtoni
ENSTNIG00000008242	-	100	81.919	ENSHCOG00000003041	-	94	81.919	Hippocampus_comes
ENSTNIG00000008242	-	100	85.563	ENSKMAG00000009979	-	89	85.263	Kryptolebias_marmoratus
ENSTNIG00000008242	-	100	91.892	ENSLBEG00000010165	-	89	91.892	Labrus_bergylta
ENSTNIG00000008242	-	99	81.590	ENSMAMG00000006312	-	94	83.381	Mastacembelus_armatus
ENSTNIG00000008242	-	100	92.278	ENSMZEG00005013913	-	86	92.278	Maylandia_zebra
ENSTNIG00000008242	-	99	92.833	ENSMMOG00000011282	-	87	92.833	Mola_mola
ENSTNIG00000008242	-	99	83.502	ENSMALG00000000494	-	92	83.502	Monopterus_albus
ENSTNIG00000008242	-	100	73.016	ENSNBRG00000007602	-	85	73.016	Neolamprologus_brichardi
ENSTNIG00000008242	-	99	58.118	ENSONIG00000003856	-	100	58.118	Oreochromis_niloticus
ENSTNIG00000008242	-	100	88.148	ENSORLG00000010117	-	89	88.148	Oryzias_latipes
ENSTNIG00000008242	-	100	85.199	ENSORLG00020000219	-	89	85.199	Oryzias_latipes_hni
ENSTNIG00000008242	-	100	84.838	ENSORLG00015000258	-	99	82.609	Oryzias_latipes_hsok
ENSTNIG00000008242	-	100	90.734	ENSOMEG00000018262	-	96	89.641	Oryzias_melastigma
ENSTNIG00000008242	-	97	63.663	ENSPFOG00000013455	-	97	58.320	Poecilia_formosa
ENSTNIG00000008242	-	100	92.339	ENSPLAG00000004027	-	88	92.339	Poecilia_latipinna
ENSTNIG00000008242	-	99	93.145	ENSPMEG00000007589	-	86	93.145	Poecilia_mexicana
ENSTNIG00000008242	-	99	75.908	ENSPREG00000000153	-	92	77.927	Poecilia_reticulata
ENSTNIG00000008242	-	99	69.730	ENSPNYG00000007781	-	96	69.730	Pundamilia_nyererei
ENSTNIG00000008242	-	100	94.545	ENSPNYG00000007814	-	94	94.545	Pundamilia_nyererei
ENSTNIG00000008242	-	100	92.664	ENSSMAG00000021251	-	92	92.664	Scophthalmus_maximus
ENSTNIG00000008242	-	100	93.050	ENSSDUG00000013904	-	86	93.050	Seriola_dumerili
ENSTNIG00000008242	-	100	92.664	ENSSLDG00000006994	-	86	92.664	Seriola_lalandi_dorsalis
ENSTNIG00000008242	-	100	91.892	ENSSPAG00000011524	-	86	91.892	Stegastes_partitus
ENSTNIG00000008242	-	100	83.065	ENSTRUG00000015687	-	84	81.664	Takifugu_rubripes
ENSTNIG00000008242	-	99	80.576	ENSXCOG00000015947	-	98	80.815	Xiphophorus_couchianus
ENSTNIG00000008242	-	99	93.145	ENSXMAG00000023291	-	87	93.145	Xiphophorus_maculatus