EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000008473 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4258 bases
Position: chr15_random:1341181-1345438
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011310	efThoc1	PF11957.8	5.3e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011492	-	2097	-	ENSTNIP00000011310	656 (aa)	-	H3CSS6

Gene Model

Click here to download ENSTNIG00000008473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008473	thoc1	99	72.239	ENSG00000079134	THOC1	99	76.838	Homo_sapiens
ENSTNIG00000008473	thoc1	99	72.256	ENSAMEG00000006645	THOC1	99	72.256	Ailuropoda_melanoleuca
ENSTNIG00000008473	thoc1	94	89.251	ENSACIG00000019392	thoc1	95	89.251	Amphilophus_citrinellus
ENSTNIG00000008473	thoc1	99	85.015	ENSAOCG00000008391	thoc1	100	85.015	Amphiprion_ocellaris
ENSTNIG00000008473	thoc1	99	90.826	ENSAPEG00000001093	thoc1	100	90.826	Amphiprion_percula
ENSTNIG00000008473	thoc1	99	90.673	ENSATEG00000004783	thoc1	100	90.673	Anabas_testudineus
ENSTNIG00000008473	thoc1	99	71.865	ENSAPLG00000016149	THOC1	98	71.865	Anas_platyrhynchos
ENSTNIG00000008473	thoc1	99	72.231	ENSACAG00000008307	THOC1	97	71.624	Anolis_carolinensis
ENSTNIG00000008473	thoc1	99	71.624	ENSANAG00000033200	THOC1	98	71.624	Aotus_nancymaae
ENSTNIG00000008473	thoc1	99	89.602	ENSACLG00000016836	thoc1	100	89.602	Astatotilapia_calliptera
ENSTNIG00000008473	thoc1	94	76.115	ENSAMXG00000014708	thoc1	98	75.439	Astyanax_mexicanus
ENSTNIG00000008473	thoc1	99	72.546	ENSBTAG00000019215	THOC1	98	72.546	Bos_taurus
ENSTNIG00000008473	thoc1	69	35.776	WBGene00020172	thoc-1	69	35.307	Caenorhabditis_elegans
ENSTNIG00000008473	thoc1	99	72.393	ENSCJAG00000020450	THOC1	98	72.393	Callithrix_jacchus
ENSTNIG00000008473	thoc1	99	72.393	ENSCAFG00000018324	THOC1	98	72.393	Canis_familiaris
ENSTNIG00000008473	thoc1	99	72.393	ENSCAFG00020017894	THOC1	98	72.393	Canis_lupus_dingo
ENSTNIG00000008473	thoc1	99	72.546	ENSCHIG00000015399	THOC1	98	73.428	Capra_hircus
ENSTNIG00000008473	thoc1	99	71.951	ENSTSYG00000010585	THOC1	99	71.951	Carlito_syrichta
ENSTNIG00000008473	thoc1	97	52.411	ENSCAPG00000016270	THOC1	97	52.411	Cavia_aperea
ENSTNIG00000008473	thoc1	99	72.086	ENSCPOG00000000959	THOC1	98	72.086	Cavia_porcellus
ENSTNIG00000008473	thoc1	99	72.393	ENSCCAG00000025766	THOC1	98	72.393	Cebus_capucinus
ENSTNIG00000008473	thoc1	99	70.399	ENSCATG00000028180	THOC1	96	77.457	Cercocebus_atys
ENSTNIG00000008473	thoc1	97	73.113	ENSCLAG00000009117	THOC1	99	73.113	Chinchilla_lanigera
ENSTNIG00000008473	thoc1	99	72.393	ENSCSAG00000017631	THOC1	98	72.393	Chlorocebus_sabaeus
ENSTNIG00000008473	thoc1	78	77.593	ENSCHOG00000010609	THOC1	78	77.593	Choloepus_hoffmanni
ENSTNIG00000008473	thoc1	99	73.047	ENSCPBG00000027558	THOC1	99	73.047	Chrysemys_picta_bellii
ENSTNIG00000008473	thoc1	74	47.505	ENSCING00000007663	-	99	47.495	Ciona_intestinalis
ENSTNIG00000008473	thoc1	94	47.410	ENSCSAVG00000010649	-	100	47.161	Ciona_savignyi
ENSTNIG00000008473	thoc1	99	72.239	ENSCANG00000034265	THOC1	96	78.070	Colobus_angolensis_palliatus
ENSTNIG00000008473	thoc1	99	72.256	ENSCGRG00001016464	Thoc1	99	72.256	Cricetulus_griseus_chok1gshd
ENSTNIG00000008473	thoc1	98	72.291	ENSCGRG00000010269	-	99	73.113	Cricetulus_griseus_crigri
ENSTNIG00000008473	thoc1	89	59.354	ENSCGRG00000003390	-	97	59.184	Cricetulus_griseus_crigri
ENSTNIG00000008473	thoc1	99	87.386	ENSCSEG00000012486	thoc1	99	88.585	Cynoglossus_semilaevis
ENSTNIG00000008473	thoc1	99	87.462	ENSCVAG00000020600	thoc1	100	87.462	Cyprinodon_variegatus
ENSTNIG00000008473	thoc1	99	82.488	ENSDARG00000088246	thoc1	99	82.488	Danio_rerio
ENSTNIG00000008473	thoc1	99	72.043	ENSDNOG00000019217	THOC1	98	72.043	Dasypus_novemcinctus
ENSTNIG00000008473	thoc1	98	68.168	ENSDORG00000008060	Thoc1	98	68.868	Dipodomys_ordii
ENSTNIG00000008473	thoc1	98	37.074	FBgn0037382	Hpr1	74	41.547	Drosophila_melanogaster
ENSTNIG00000008473	thoc1	89	55.612	ENSETEG00000004165	THOC1	98	55.612	Echinops_telfairi
ENSTNIG00000008473	thoc1	92	62.417	ENSEBUG00000005998	thoc1	98	63.184	Eptatretus_burgeri
ENSTNIG00000008473	thoc1	99	71.994	ENSEASG00005002549	THOC1	95	71.385	Equus_asinus_asinus
ENSTNIG00000008473	thoc1	99	72.298	ENSECAG00000009267	THOC1	89	72.298	Equus_caballus
ENSTNIG00000008473	thoc1	79	57.447	ENSEEUG00000012214	-	81	57.447	Erinaceus_europaeus
ENSTNIG00000008473	thoc1	99	86.433	ENSELUG00000023277	thoc1	99	86.433	Esox_lucius
ENSTNIG00000008473	thoc1	99	72.409	ENSFCAG00000022454	THOC1	86	72.409	Felis_catus
ENSTNIG00000008473	thoc1	97	72.387	ENSFALG00000006205	THOC1	99	72.387	Ficedula_albicollis
ENSTNIG00000008473	thoc1	98	72.826	ENSFDAG00000006842	THOC1	99	72.826	Fukomys_damarensis
ENSTNIG00000008473	thoc1	99	88.226	ENSFHEG00000008841	thoc1	100	88.226	Fundulus_heteroclitus
ENSTNIG00000008473	thoc1	99	86.656	ENSGMOG00000011486	thoc1	99	86.656	Gadus_morhua
ENSTNIG00000008473	thoc1	99	72.435	ENSGALG00000014915	THOC1	99	71.558	Gallus_gallus
ENSTNIG00000008473	thoc1	99	87.003	ENSGAFG00000021464	thoc1	100	87.003	Gambusia_affinis
ENSTNIG00000008473	thoc1	99	89.555	ENSGACG00000017361	thoc1	100	89.450	Gasterosteus_aculeatus
ENSTNIG00000008473	thoc1	99	73.354	ENSGAGG00000021230	-	97	73.354	Gopherus_agassizii
ENSTNIG00000008473	thoc1	99	72.409	ENSGGOG00000003013	THOC1	99	72.409	Gorilla_gorilla
ENSTNIG00000008473	thoc1	99	89.908	ENSHBUG00000009096	thoc1	100	89.908	Haplochromis_burtoni
ENSTNIG00000008473	thoc1	68	69.189	ENSHGLG00000009264	-	98	69.189	Heterocephalus_glaber_female
ENSTNIG00000008473	thoc1	99	72.853	ENSHGLG00000003712	-	98	72.853	Heterocephalus_glaber_female
ENSTNIG00000008473	thoc1	99	72.699	ENSHGLG00100003570	THOC1	98	72.699	Heterocephalus_glaber_male
ENSTNIG00000008473	thoc1	77	58.201	ENSHGLG00100002225	-	98	58.201	Heterocephalus_glaber_male
ENSTNIG00000008473	thoc1	92	79.035	ENSIPUG00000005306	thoc1	99	77.737	Ictalurus_punctatus
ENSTNIG00000008473	thoc1	99	72.239	ENSSTOG00000006484	THOC1	98	72.239	Ictidomys_tridecemlineatus
ENSTNIG00000008473	thoc1	52	73.837	ENSJJAG00000014893	-	96	73.837	Jaculus_jaculus
ENSTNIG00000008473	thoc1	99	89.433	ENSKMAG00000003904	thoc1	99	89.433	Kryptolebias_marmoratus
ENSTNIG00000008473	thoc1	100	89.939	ENSLBEG00000020372	thoc1	98	89.939	Labrus_bergylta
ENSTNIG00000008473	thoc1	99	72.129	ENSLACG00000014869	THOC1	99	71.822	Latimeria_chalumnae
ENSTNIG00000008473	thoc1	99	81.126	ENSLOCG00000002097	thoc1	99	80.822	Lepisosteus_oculatus
ENSTNIG00000008473	thoc1	99	72.086	ENSLAFG00000009585	THOC1	98	72.086	Loxodonta_africana
ENSTNIG00000008473	thoc1	99	72.409	ENSMFAG00000041520	THOC1	99	72.409	Macaca_fascicularis
ENSTNIG00000008473	thoc1	99	72.393	ENSMMUG00000004662	THOC1	98	72.393	Macaca_mulatta
ENSTNIG00000008473	thoc1	99	72.409	ENSMNEG00000040177	THOC1	99	72.409	Macaca_nemestrina
ENSTNIG00000008473	thoc1	99	72.409	ENSMLEG00000034201	THOC1	99	72.409	Mandrillus_leucophaeus
ENSTNIG00000008473	thoc1	95	87.719	ENSMAMG00000016747	thoc1	100	87.719	Mastacembelus_armatus
ENSTNIG00000008473	thoc1	99	89.602	ENSMZEG00005024609	thoc1	100	89.602	Maylandia_zebra
ENSTNIG00000008473	thoc1	97	72.613	ENSMGAG00000009811	THOC1	99	72.613	Meleagris_gallopavo
ENSTNIG00000008473	thoc1	99	71.779	ENSMAUG00000010272	Thoc1	99	71.799	Mesocricetus_auratus
ENSTNIG00000008473	thoc1	99	72.239	ENSMICG00000027200	THOC1	98	72.239	Microcebus_murinus
ENSTNIG00000008473	thoc1	99	62.730	ENSMOCG00000014924	-	95	62.117	Microtus_ochrogaster
ENSTNIG00000008473	thoc1	99	70.706	ENSMOCG00000014536	-	85	70.706	Microtus_ochrogaster
ENSTNIG00000008473	thoc1	93	91.667	ENSMMOG00000011772	thoc1	100	91.667	Mola_mola
ENSTNIG00000008473	thoc1	99	71.125	ENSMODG00000021482	THOC1	98	71.125	Monodelphis_domestica
ENSTNIG00000008473	thoc1	99	88.991	ENSMALG00000021872	thoc1	100	88.991	Monopterus_albus
ENSTNIG00000008473	thoc1	99	71.166	MGP_CAROLIEiJ_G0021989	Thoc1	98	71.166	Mus_caroli
ENSTNIG00000008473	thoc1	99	71.319	ENSMUSG00000024287	Thoc1	98	71.319	Mus_musculus
ENSTNIG00000008473	thoc1	99	71.319	MGP_PahariEiJ_G0018726	Thoc1	98	71.319	Mus_pahari
ENSTNIG00000008473	thoc1	99	71.319	MGP_SPRETEiJ_G0022905	Thoc1	98	71.319	Mus_spretus
ENSTNIG00000008473	thoc1	99	72.239	ENSMPUG00000005448	THOC1	98	72.239	Mustela_putorius_furo
ENSTNIG00000008473	thoc1	90	66.164	ENSMLUG00000027965	-	99	66.332	Myotis_lucifugus
ENSTNIG00000008473	thoc1	99	71.472	ENSMLUG00000004090	-	98	71.472	Myotis_lucifugus
ENSTNIG00000008473	thoc1	61	66.667	ENSMLUG00000024912	-	100	66.667	Myotis_lucifugus
ENSTNIG00000008473	thoc1	99	72.393	ENSNGAG00000001401	-	98	72.393	Nannospalax_galili
ENSTNIG00000008473	thoc1	97	58.085	ENSNGAG00000008061	-	97	58.085	Nannospalax_galili
ENSTNIG00000008473	thoc1	97	88.401	ENSNBRG00000005991	thoc1	97	88.401	Neolamprologus_brichardi
ENSTNIG00000008473	thoc1	99	72.393	ENSNLEG00000006835	THOC1	98	72.393	Nomascus_leucogenys
ENSTNIG00000008473	thoc1	89	76.017	ENSMEUG00000009756	THOC1	82	76.017	Notamacropus_eugenii
ENSTNIG00000008473	thoc1	99	58.742	ENSOPRG00000001108	THOC1	98	58.742	Ochotona_princeps
ENSTNIG00000008473	thoc1	99	67.331	ENSODEG00000006623	THOC1	98	67.331	Octodon_degus
ENSTNIG00000008473	thoc1	99	90.169	ENSONIG00000009440	thoc1	98	90.169	Oreochromis_niloticus
ENSTNIG00000008473	thoc1	99	72.239	ENSOCUG00000011601	THOC1	98	72.239	Oryctolagus_cuniculus
ENSTNIG00000008473	thoc1	99	89.144	ENSORLG00000017629	thoc1	100	89.144	Oryzias_latipes
ENSTNIG00000008473	thoc1	99	88.991	ENSORLG00020007567	thoc1	100	88.991	Oryzias_latipes_hni
ENSTNIG00000008473	thoc1	99	89.144	ENSORLG00015007356	thoc1	100	89.144	Oryzias_latipes_hsok
ENSTNIG00000008473	thoc1	99	87.615	ENSOMEG00000008200	thoc1	100	87.003	Oryzias_melastigma
ENSTNIG00000008473	thoc1	99	69.360	ENSOGAG00000000470	THOC1	99	69.360	Otolemur_garnettii
ENSTNIG00000008473	thoc1	98	72.939	ENSOARG00000009238	THOC1	97	72.939	Ovis_aries
ENSTNIG00000008473	thoc1	99	72.409	ENSPPAG00000031812	THOC1	99	72.409	Pan_paniscus
ENSTNIG00000008473	thoc1	99	71.779	ENSPPRG00000023794	THOC1	96	77.168	Panthera_pardus
ENSTNIG00000008473	thoc1	99	71.779	ENSPTIG00000007469	THOC1	96	77.168	Panthera_tigris_altaica
ENSTNIG00000008473	thoc1	99	71.472	ENSPTRG00000009816	THOC1	98	71.472	Pan_troglodytes
ENSTNIG00000008473	thoc1	99	71.494	ENSPANG00000008665	THOC1	98	71.494	Papio_anubis
ENSTNIG00000008473	thoc1	99	83.333	ENSPKIG00000005906	thoc1	99	83.945	Paramormyrops_kingsleyae
ENSTNIG00000008473	thoc1	80	75.568	ENSPSIG00000007691	THOC1	97	75.568	Pelodiscus_sinensis
ENSTNIG00000008473	thoc1	94	84.355	ENSPMGG00000008279	thoc1	95	84.355	Periophthalmus_magnuspinnatus
ENSTNIG00000008473	thoc1	99	71.472	ENSPEMG00000021789	Thoc1	98	71.472	Peromyscus_maniculatus_bairdii
ENSTNIG00000008473	thoc1	73	71.837	ENSPCIG00000026942	THOC1	97	71.837	Phascolarctos_cinereus
ENSTNIG00000008473	thoc1	99	86.850	ENSPFOG00000011673	thoc1	100	86.850	Poecilia_formosa
ENSTNIG00000008473	thoc1	99	87.003	ENSPLAG00000019648	thoc1	100	87.003	Poecilia_latipinna
ENSTNIG00000008473	thoc1	99	87.003	ENSPMEG00000007083	thoc1	100	87.003	Poecilia_mexicana
ENSTNIG00000008473	thoc1	99	87.156	ENSPREG00000006719	thoc1	100	87.156	Poecilia_reticulata
ENSTNIG00000008473	thoc1	74	75.926	ENSPPYG00000009049	-	98	75.926	Pongo_abelii
ENSTNIG00000008473	thoc1	99	63.957	ENSPCAG00000005320	THOC1	91	73.913	Procavia_capensis
ENSTNIG00000008473	thoc1	99	71.779	ENSPCOG00000009234	THOC1	98	71.779	Propithecus_coquereli
ENSTNIG00000008473	thoc1	99	70.706	ENSPVAG00000004007	THOC1	98	70.706	Pteropus_vampyrus
ENSTNIG00000008473	thoc1	99	89.908	ENSPNYG00000019152	thoc1	100	89.908	Pundamilia_nyererei
ENSTNIG00000008473	thoc1	99	81.930	ENSPNAG00000023390	thoc1	99	81.623	Pygocentrus_nattereri
ENSTNIG00000008473	thoc1	80	60.215	ENSRNOG00000015332	Thoc1	94	60.215	Rattus_norvegicus
ENSTNIG00000008473	thoc1	99	71.624	ENSRBIG00000033738	THOC1	99	74.177	Rhinopithecus_bieti
ENSTNIG00000008473	thoc1	99	72.393	ENSRROG00000044988	THOC1	96	78.070	Rhinopithecus_roxellana
ENSTNIG00000008473	thoc1	99	72.409	ENSSBOG00000016556	THOC1	99	72.409	Saimiri_boliviensis_boliviensis
ENSTNIG00000008473	thoc1	99	72.086	ENSSHAG00000014829	THOC1	98	72.086	Sarcophilus_harrisii
ENSTNIG00000008473	thoc1	99	84.992	ENSSFOG00015021527	thoc1	99	84.992	Scleropages_formosus
ENSTNIG00000008473	thoc1	99	86.778	ENSSMAG00000018465	thoc1	100	86.778	Scophthalmus_maximus
ENSTNIG00000008473	thoc1	99	90.673	ENSSDUG00000016810	thoc1	100	90.673	Seriola_dumerili
ENSTNIG00000008473	thoc1	99	90.367	ENSSLDG00000015555	thoc1	100	90.367	Seriola_lalandi_dorsalis
ENSTNIG00000008473	thoc1	87	72.587	ENSSARG00000006910	THOC1	86	72.587	Sorex_araneus
ENSTNIG00000008473	thoc1	98	72.317	ENSSPUG00000007238	THOC1	98	72.000	Sphenodon_punctatus
ENSTNIG00000008473	thoc1	99	86.149	ENSSPAG00000018847	thoc1	100	86.149	Stegastes_partitus
ENSTNIG00000008473	thoc1	99	72.409	ENSSSCG00000025653	THOC1	93	72.409	Sus_scrofa
ENSTNIG00000008473	thoc1	99	72.588	ENSTGUG00000010204	THOC1	99	72.588	Taeniopygia_guttata
ENSTNIG00000008473	thoc1	99	95.260	ENSTRUG00000013518	thoc1	100	95.260	Takifugu_rubripes
ENSTNIG00000008473	thoc1	99	64.877	ENSTBEG00000016920	THOC1	98	64.877	Tupaia_belangeri
ENSTNIG00000008473	thoc1	99	66.411	ENSTTRG00000016664	THOC1	98	66.411	Tursiops_truncatus
ENSTNIG00000008473	thoc1	99	72.393	ENSUAMG00000002527	THOC1	98	72.393	Ursus_americanus
ENSTNIG00000008473	thoc1	99	72.393	ENSUMAG00000019693	THOC1	98	72.393	Ursus_maritimus
ENSTNIG00000008473	thoc1	66	67.220	ENSVPAG00000003726	-	66	67.220	Vicugna_pacos
ENSTNIG00000008473	thoc1	99	72.393	ENSVVUG00000004384	THOC1	98	72.393	Vulpes_vulpes
ENSTNIG00000008473	thoc1	99	68.788	ENSXETG00000003155	thoc1	97	68.788	Xenopus_tropicalis
ENSTNIG00000008473	thoc1	94	83.713	ENSXCOG00000016085	thoc1	89	83.713	Xiphophorus_couchianus
ENSTNIG00000008473	thoc1	99	87.462	ENSXMAG00000002353	thoc1	100	87.462	Xiphophorus_maculatus