EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000008549 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: FLJ37078
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 19294 bases
Position: chr7:2615824-2635117
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011389	cwf21	PF08312.12	1.3e-15	1	1
ENSTNIP00000011389	SRRM_C	PF15230.6	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011571	-	1956	-	ENSTNIP00000011389	652 (aa)	-	H3CT05

Gene Model

Click here to download ENSTNIG00000008549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008549's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008549	-	71	77.778	ENSACLG00000005269	SRRM3	67	77.778	Astatotilapia_calliptera
ENSTNIG00000008549	-	84	48.208	ENSAMXG00000016051	-	81	49.369	Astyanax_mexicanus
ENSTNIG00000008549	-	56	52.489	ENSCLAG00000007682	SRRM3	56	96.429	Chinchilla_lanigera
ENSTNIG00000008549	-	56	47.340	ENSCGRG00001011385	Srrm3	82	41.228	Cricetulus_griseus_chok1gshd
ENSTNIG00000008549	-	71	80.741	ENSGAFG00000014777	SRRM3	68	80.741	Gambusia_affinis
ENSTNIG00000008549	-	71	77.778	ENSHBUG00000005061	SRRM3	67	77.778	Haplochromis_burtoni
ENSTNIG00000008549	-	50	42.508	ENSJJAG00000023441	Srrm3	89	37.455	Jaculus_jaculus
ENSTNIG00000008549	-	58	44.935	ENSMAUG00000017613	Srrm3	58	73.077	Mesocricetus_auratus
ENSTNIG00000008549	-	56	45.308	ENSMOCG00000002565	Srrm3	82	42.754	Microtus_ochrogaster
ENSTNIG00000008549	-	50	47.432	MGP_CAROLIEiJ_G0027845	-	81	47.945	Mus_caroli
ENSTNIG00000008549	-	50	47.130	MGP_PahariEiJ_G0024425	Srrm3	58	74.359	Mus_pahari
ENSTNIG00000008549	-	50	63.746	ENSONIG00000012732	-	92	54.545	Oreochromis_niloticus
ENSTNIG00000008549	-	82	36.140	ENSOANG00000004590	-	54	41.486	Ornithorhynchus_anatinus
ENSTNIG00000008549	-	85	45.848	ENSPKIG00000017233	SRRM3	85	45.196	Paramormyrops_kingsleyae
ENSTNIG00000008549	-	59	79.104	ENSPFOG00000009007	SRRM3	59	78.519	Poecilia_formosa
ENSTNIG00000008549	-	71	79.104	ENSPMEG00000011981	-	68	78.519	Poecilia_mexicana
ENSTNIG00000008549	-	50	49.541	ENSPCOG00000028464	SRRM3	83	43.423	Propithecus_coquereli
ENSTNIG00000008549	-	85	47.660	ENSPNAG00000009621	SRRM3	80	48.155	Pygocentrus_nattereri
ENSTNIG00000008549	-	55	50.270	ENSSFOG00015001696	SRRM3	79	47.632	Scleropages_formosus
ENSTNIG00000008549	-	71	80.000	ENSXMAG00000005663	-	68	80.000	Xiphophorus_maculatus