EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000008588 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1941 bases
Position: chr7:2174048-2175988
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011428	RNase_T	PF00929.24	6.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011610	-	678	-	ENSTNIP00000011428	226 (aa)	-	H3CT44

Gene Model

Click here to download ENSTNIG00000008588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008588	smfn	97	73.182	ENSG00000076043	REXO2	96	80.663	Homo_sapiens
ENSTNIG00000008588	smfn	95	74.312	ENSAMEG00000013263	REXO2	80	81.579	Ailuropoda_melanoleuca
ENSTNIG00000008588	smfn	80	85.635	ENSACIG00000023553	smfn	97	85.635	Amphilophus_citrinellus
ENSTNIG00000008588	smfn	67	69.620	ENSAOCG00000011565	smfn	96	69.620	Amphiprion_ocellaris
ENSTNIG00000008588	smfn	86	86.082	ENSAPEG00000012435	smfn	70	86.316	Amphiprion_percula
ENSTNIG00000008588	smfn	93	76.233	ENSATEG00000015385	smfn	68	84.211	Anabas_testudineus
ENSTNIG00000008588	smfn	83	79.144	ENSAPLG00000005045	REXO2	91	79.144	Anas_platyrhynchos
ENSTNIG00000008588	smfn	88	71.212	ENSACAG00000011631	REXO2	84	76.111	Anolis_carolinensis
ENSTNIG00000008588	smfn	95	74.771	ENSANAG00000020834	REXO2	80	82.105	Aotus_nancymaae
ENSTNIG00000008588	smfn	51	65.517	ENSANAG00000027457	-	81	66.379	Aotus_nancymaae
ENSTNIG00000008588	smfn	100	76.496	ENSACLG00000024566	smfn	95	85.635	Astatotilapia_calliptera
ENSTNIG00000008588	smfn	95	74.312	ENSBTAG00000005843	REXO2	80	81.579	Bos_taurus
ENSTNIG00000008588	smfn	78	48.588	WBGene00007429	C08B6.8	99	51.948	Caenorhabditis_elegans
ENSTNIG00000008588	smfn	97	72.727	ENSCJAG00000012434	REXO2	80	81.053	Callithrix_jacchus
ENSTNIG00000008588	smfn	97	72.727	ENSCAFG00000013511	REXO2	80	80.526	Canis_familiaris
ENSTNIG00000008588	smfn	97	73.636	ENSCAFG00020002513	REXO2	80	81.579	Canis_lupus_dingo
ENSTNIG00000008588	smfn	95	74.312	ENSCHIG00000009264	REXO2	80	81.579	Capra_hircus
ENSTNIG00000008588	smfn	95	74.771	ENSTSYG00000002237	REXO2	80	82.105	Carlito_syrichta
ENSTNIG00000008588	smfn	83	69.681	ENSTSYG00000027948	-	96	69.681	Carlito_syrichta
ENSTNIG00000008588	smfn	80	81.215	ENSCAPG00000006093	REXO2	96	81.215	Cavia_aperea
ENSTNIG00000008588	smfn	95	74.771	ENSCPOG00000010548	REXO2	80	82.105	Cavia_porcellus
ENSTNIG00000008588	smfn	95	74.771	ENSCCAG00000034979	REXO2	80	82.105	Cebus_capucinus
ENSTNIG00000008588	smfn	95	74.312	ENSCATG00000015278	REXO2	80	81.579	Cercocebus_atys
ENSTNIG00000008588	smfn	97	73.059	ENSCLAG00000011195	REXO2	81	82.105	Chinchilla_lanigera
ENSTNIG00000008588	smfn	95	74.312	ENSCSAG00000002754	REXO2	80	81.579	Chlorocebus_sabaeus
ENSTNIG00000008588	smfn	57	73.846	ENSCHOG00000013497	REXO2	71	90.000	Choloepus_hoffmanni
ENSTNIG00000008588	smfn	97	71.364	ENSCHOG00000000642	-	80	80.000	Choloepus_hoffmanni
ENSTNIG00000008588	smfn	61	71.739	ENSCPBG00000009359	REXO2	95	71.739	Chrysemys_picta_bellii
ENSTNIG00000008588	smfn	77	61.143	ENSCING00000009858	-	84	61.143	Ciona_intestinalis
ENSTNIG00000008588	smfn	95	74.312	ENSCANG00000034756	REXO2	80	81.579	Colobus_angolensis_palliatus
ENSTNIG00000008588	smfn	85	78.756	ENSCGRG00001010922	-	93	78.947	Cricetulus_griseus_chok1gshd
ENSTNIG00000008588	smfn	95	75.229	ENSCGRG00001019814	-	80	81.579	Cricetulus_griseus_chok1gshd
ENSTNIG00000008588	smfn	85	80.311	ENSCGRG00001013673	-	93	80.526	Cricetulus_griseus_chok1gshd
ENSTNIG00000008588	smfn	95	75.229	ENSCGRG00000006235	Rexo2	80	81.579	Cricetulus_griseus_crigri
ENSTNIG00000008588	smfn	84	83.684	ENSCSEG00000007214	smfn	69	83.684	Cynoglossus_semilaevis
ENSTNIG00000008588	smfn	80	81.111	ENSCVAG00000012008	smfn	97	81.111	Cyprinodon_variegatus
ENSTNIG00000008588	smfn	96	75.576	ENSDARG00000009806	smfn	83	75.576	Danio_rerio
ENSTNIG00000008588	smfn	86	77.949	ENSDNOG00000046533	REXO2	97	75.369	Dasypus_novemcinctus
ENSTNIG00000008588	smfn	92	58.173	ENSDORG00000025142	-	95	55.507	Dipodomys_ordii
ENSTNIG00000008588	smfn	94	75.115	ENSDORG00000011255	Rexo2	80	82.105	Dipodomys_ordii
ENSTNIG00000008588	smfn	82	50.532	FBgn0039115	CG10214	82	52.299	Drosophila_melanogaster
ENSTNIG00000008588	smfn	79	78.090	ENSEBUG00000013964	REXO2	64	75.000	Eptatretus_burgeri
ENSTNIG00000008588	smfn	89	78.109	ENSEASG00005006674	REXO2	80	81.579	Equus_asinus_asinus
ENSTNIG00000008588	smfn	89	78.109	ENSECAG00000005988	REXO2	80	81.579	Equus_caballus
ENSTNIG00000008588	smfn	88	80.000	ENSELUG00000020072	smfn	66	82.105	Esox_lucius
ENSTNIG00000008588	smfn	95	74.312	ENSFCAG00000018632	REXO2	80	81.579	Felis_catus
ENSTNIG00000008588	smfn	81	78.571	ENSFALG00000010044	REXO2	90	78.571	Ficedula_albicollis
ENSTNIG00000008588	smfn	95	74.775	ENSFDAG00000011764	REXO2	80	82.105	Fukomys_damarensis
ENSTNIG00000008588	smfn	83	82.979	ENSGMOG00000006370	smfn	93	84.358	Gadus_morhua
ENSTNIG00000008588	smfn	84	81.053	ENSGALG00000035980	REXO2	82	81.053	Gallus_gallus
ENSTNIG00000008588	smfn	87	84.264	ENSGAFG00000015349	smfn	68	84.656	Gambusia_affinis
ENSTNIG00000008588	smfn	81	84.066	ENSGACG00000020096	smfn	87	85.795	Gasterosteus_aculeatus
ENSTNIG00000008588	smfn	95	73.733	ENSGAGG00000021126	REXO2	82	80.952	Gopherus_agassizii
ENSTNIG00000008588	smfn	95	74.312	ENSGGOG00000023267	REXO2	80	81.579	Gorilla_gorilla
ENSTNIG00000008588	smfn	100	55.556	ENSHBUG00000020097	REXO2	62	83.465	Haplochromis_burtoni
ENSTNIG00000008588	smfn	85	81.347	ENSHGLG00000013556	REXO2	80	81.579	Heterocephalus_glaber_female
ENSTNIG00000008588	smfn	85	81.865	ENSHGLG00100005257	REXO2	80	82.105	Heterocephalus_glaber_male
ENSTNIG00000008588	smfn	80	80.556	ENSHCOG00000007122	smfn	98	80.556	Hippocampus_comes
ENSTNIG00000008588	smfn	86	82.051	ENSIPUG00000020440	rexo2	70	83.158	Ictalurus_punctatus
ENSTNIG00000008588	smfn	89	78.607	ENSSTOG00000012465	REXO2	80	82.105	Ictidomys_tridecemlineatus
ENSTNIG00000008588	smfn	99	53.571	ENSJJAG00000022605	-	75	58.947	Jaculus_jaculus
ENSTNIG00000008588	smfn	95	74.771	ENSJJAG00000013710	-	80	82.105	Jaculus_jaculus
ENSTNIG00000008588	smfn	84	82.632	ENSKMAG00000016795	smfn	67	82.632	Kryptolebias_marmoratus
ENSTNIG00000008588	smfn	80	81.215	ENSLBEG00000006021	smfn	96	81.215	Labrus_bergylta
ENSTNIG00000008588	smfn	96	66.667	ENSLACG00000018623	REXO2	92	65.778	Latimeria_chalumnae
ENSTNIG00000008588	smfn	90	78.325	ENSLOCG00000002389	smfn	90	81.579	Lepisosteus_oculatus
ENSTNIG00000008588	smfn	85	81.347	ENSLAFG00000012451	REXO2	80	81.579	Loxodonta_africana
ENSTNIG00000008588	smfn	95	74.312	ENSMFAG00000041155	REXO2	80	81.579	Macaca_fascicularis
ENSTNIG00000008588	smfn	95	74.312	ENSMMUG00000012269	REXO2	80	81.579	Macaca_mulatta
ENSTNIG00000008588	smfn	95	74.312	ENSMNEG00000033379	REXO2	80	81.579	Macaca_nemestrina
ENSTNIG00000008588	smfn	95	74.312	ENSMLEG00000036571	REXO2	80	81.579	Mandrillus_leucophaeus
ENSTNIG00000008588	smfn	94	82.326	ENSMAMG00000021209	smfn	68	86.842	Mastacembelus_armatus
ENSTNIG00000008588	smfn	100	76.496	ENSMZEG00005020730	REXO2	79	80.093	Maylandia_zebra
ENSTNIG00000008588	smfn	100	76.496	ENSMZEG00005023224	-	79	80.093	Maylandia_zebra
ENSTNIG00000008588	smfn	68	77.564	ENSMGAG00000003026	REXO2	96	77.564	Meleagris_gallopavo
ENSTNIG00000008588	smfn	95	75.229	ENSMAUG00000014576	Rexo2	80	81.579	Mesocricetus_auratus
ENSTNIG00000008588	smfn	95	74.771	ENSMICG00000010094	REXO2	80	82.105	Microcebus_murinus
ENSTNIG00000008588	smfn	95	74.312	ENSMOCG00000009016	Rexo2	80	81.579	Microtus_ochrogaster
ENSTNIG00000008588	smfn	92	81.159	ENSMMOG00000006430	smfn	77	81.159	Mola_mola
ENSTNIG00000008588	smfn	97	75.799	ENSMODG00000013913	REXO2	93	75.799	Monodelphis_domestica
ENSTNIG00000008588	smfn	95	78.704	ENSMALG00000018130	smfn	54	82.105	Monopterus_albus
ENSTNIG00000008588	smfn	95	74.771	MGP_CAROLIEiJ_G0032166	Rexo2	92	73.853	Mus_caroli
ENSTNIG00000008588	smfn	95	74.771	ENSMUSG00000032026	Rexo2	92	73.853	Mus_musculus
ENSTNIG00000008588	smfn	95	74.771	MGP_PahariEiJ_G0015034	Rexo2	92	73.853	Mus_pahari
ENSTNIG00000008588	smfn	95	74.771	MGP_SPRETEiJ_G0033305	Rexo2	92	73.853	Mus_spretus
ENSTNIG00000008588	smfn	95	74.312	ENSMPUG00000003947	REXO2	80	81.579	Mustela_putorius_furo
ENSTNIG00000008588	smfn	95	73.853	ENSMLUG00000009030	REXO2	80	81.053	Myotis_lucifugus
ENSTNIG00000008588	smfn	85	81.865	ENSNGAG00000008819	Rexo2	93	82.105	Nannospalax_galili
ENSTNIG00000008588	smfn	80	86.188	ENSNBRG00000006529	smfn	95	86.188	Neolamprologus_brichardi
ENSTNIG00000008588	smfn	95	74.312	ENSNLEG00000029745	REXO2	80	81.579	Nomascus_leucogenys
ENSTNIG00000008588	smfn	93	77.619	ENSMEUG00000011558	REXO2	87	83.158	Notamacropus_eugenii
ENSTNIG00000008588	smfn	85	54.922	ENSOPRG00000011076	REXO2	54	74.803	Ochotona_princeps
ENSTNIG00000008588	smfn	85	63.077	ENSODEG00000016046	-	84	68.235	Octodon_degus
ENSTNIG00000008588	smfn	80	81.215	ENSODEG00000009750	-	96	81.215	Octodon_degus
ENSTNIG00000008588	smfn	93	81.944	ENSONIG00000001954	smfn	89	81.019	Oreochromis_niloticus
ENSTNIG00000008588	smfn	89	78.607	ENSOANG00000001754	REXO2	91	75.576	Ornithorhynchus_anatinus
ENSTNIG00000008588	smfn	89	78.607	ENSOCUG00000004274	REXO2	76	82.105	Oryctolagus_cuniculus
ENSTNIG00000008588	smfn	86	83.077	ENSORLG00000005119	smfn	62	83.158	Oryzias_latipes
ENSTNIG00000008588	smfn	86	83.077	ENSORLG00020010121	smfn	61	83.598	Oryzias_latipes_hni
ENSTNIG00000008588	smfn	94	76.577	ENSORLG00015015699	smfn	61	83.158	Oryzias_latipes_hsok
ENSTNIG00000008588	smfn	61	78.261	ENSOMEG00000008940	-	97	78.261	Oryzias_melastigma
ENSTNIG00000008588	smfn	86	82.051	ENSOMEG00000016878	REXO2	70	82.105	Oryzias_melastigma
ENSTNIG00000008588	smfn	95	74.771	ENSOGAG00000016860	REXO2	80	82.105	Otolemur_garnettii
ENSTNIG00000008588	smfn	85	81.347	ENSOARG00000001040	REXO2	89	81.579	Ovis_aries
ENSTNIG00000008588	smfn	97	73.182	ENSPPAG00000039849	REXO2	80	81.579	Pan_paniscus
ENSTNIG00000008588	smfn	95	74.312	ENSPPRG00000007255	REXO2	80	81.579	Panthera_pardus
ENSTNIG00000008588	smfn	80	80.663	ENSPTIG00000015578	REXO2	96	80.663	Panthera_tigris_altaica
ENSTNIG00000008588	smfn	97	73.182	ENSPTRG00000004306	REXO2	80	81.579	Pan_troglodytes
ENSTNIG00000008588	smfn	95	74.312	ENSPANG00000010675	REXO2	80	81.579	Papio_anubis
ENSTNIG00000008588	smfn	89	78.607	ENSPKIG00000000911	smfn	77	86.486	Paramormyrops_kingsleyae
ENSTNIG00000008588	smfn	85	81.865	ENSPSIG00000005151	REXO2	69	82.105	Pelodiscus_sinensis
ENSTNIG00000008588	smfn	80	81.215	ENSPMGG00000007442	smfn	96	81.215	Periophthalmus_magnuspinnatus
ENSTNIG00000008588	smfn	95	60.092	ENSPEMG00000001421	Rexo2	79	65.263	Peromyscus_maniculatus_bairdii
ENSTNIG00000008588	smfn	50	74.561	ENSPMAG00000001022	REXO2	98	74.561	Petromyzon_marinus
ENSTNIG00000008588	smfn	99	74.888	ENSPCIG00000011227	REXO2	58	75.799	Phascolarctos_cinereus
ENSTNIG00000008588	smfn	88	83.838	ENSPFOG00000017861	smfn	94	84.211	Poecilia_formosa
ENSTNIG00000008588	smfn	80	82.222	ENSPLAG00000007327	REXO2	65	82.558	Poecilia_latipinna
ENSTNIG00000008588	smfn	88	84.343	ENSPMEG00000017343	smfn	68	84.737	Poecilia_mexicana
ENSTNIG00000008588	smfn	88	84.343	ENSPREG00000016438	smfn	68	84.737	Poecilia_reticulata
ENSTNIG00000008588	smfn	95	74.312	ENSPPYG00000003895	REXO2	80	81.579	Pongo_abelii
ENSTNIG00000008588	smfn	85	80.829	ENSPCAG00000005237	REXO2	80	81.053	Procavia_capensis
ENSTNIG00000008588	smfn	79	77.596	ENSPCOG00000027639	REXO2	79	87.097	Propithecus_coquereli
ENSTNIG00000008588	smfn	95	62.273	ENSPVAG00000005295	REXO2	80	67.708	Pteropus_vampyrus
ENSTNIG00000008588	smfn	100	76.068	ENSPNYG00000018401	smfn	79	79.630	Pundamilia_nyererei
ENSTNIG00000008588	smfn	85	82.292	ENSPNAG00000005290	smfn	70	83.158	Pygocentrus_nattereri
ENSTNIG00000008588	smfn	95	74.771	ENSRNOG00000018939	Rexo2	92	73.853	Rattus_norvegicus
ENSTNIG00000008588	smfn	95	74.312	ENSRBIG00000037809	REXO2	80	81.579	Rhinopithecus_bieti
ENSTNIG00000008588	smfn	95	74.312	ENSRROG00000038928	REXO2	80	81.579	Rhinopithecus_roxellana
ENSTNIG00000008588	smfn	84	41.117	YLR059C	REX2	68	43.478	Saccharomyces_cerevisiae
ENSTNIG00000008588	smfn	97	74.091	ENSSBOG00000028651	REXO2	80	82.105	Saimiri_boliviensis_boliviensis
ENSTNIG00000008588	smfn	97	75.799	ENSSHAG00000008008	REXO2	94	75.799	Sarcophilus_harrisii
ENSTNIG00000008588	smfn	80	81.768	ENSSFOG00015022414	smfn	96	81.768	Scleropages_formosus
ENSTNIG00000008588	smfn	96	77.880	ENSSMAG00000003168	smfn	83	75.000	Scophthalmus_maximus
ENSTNIG00000008588	smfn	100	76.316	ENSSDUG00000015624	smfn	80	75.877	Seriola_dumerili
ENSTNIG00000008588	smfn	96	80.734	ENSSLDG00000014005	smfn	77	79.358	Seriola_lalandi_dorsalis
ENSTNIG00000008588	smfn	56	88.976	ENSSARG00000014530	REXO2	100	88.976	Sorex_araneus
ENSTNIG00000008588	smfn	68	74.510	ENSSPUG00000006005	REXO2	82	74.510	Sphenodon_punctatus
ENSTNIG00000008588	smfn	80	85.635	ENSSPAG00000001530	smfn	97	85.635	Stegastes_partitus
ENSTNIG00000008588	smfn	89	78.109	ENSSSCG00000015056	REXO2	80	81.579	Sus_scrofa
ENSTNIG00000008588	smfn	85	78.238	ENSTGUG00000000121	REXO2	81	78.947	Taeniopygia_guttata
ENSTNIG00000008588	smfn	100	81.498	ENSTRUG00000021529	smfn	84	81.498	Takifugu_rubripes
ENSTNIG00000008588	smfn	89	78.607	ENSTBEG00000017040	REXO2	80	82.105	Tupaia_belangeri
ENSTNIG00000008588	smfn	99	70.742	ENSTTRG00000014928	REXO2	97	70.742	Tursiops_truncatus
ENSTNIG00000008588	smfn	95	68.636	ENSUAMG00000019096	REXO2	79	86.452	Ursus_americanus
ENSTNIG00000008588	smfn	95	74.312	ENSUMAG00000003770	REXO2	80	81.579	Ursus_maritimus
ENSTNIG00000008588	smfn	73	64.458	ENSVPAG00000006301	REXO2	96	61.326	Vicugna_pacos
ENSTNIG00000008588	smfn	97	73.636	ENSVVUG00000025223	REXO2	93	73.636	Vulpes_vulpes
ENSTNIG00000008588	smfn	92	76.923	ENSXETG00000012648	rexo2	78	81.675	Xenopus_tropicalis
ENSTNIG00000008588	smfn	80	82.222	ENSXCOG00000018838	smfn	92	81.768	Xiphophorus_couchianus
ENSTNIG00000008588	smfn	86	82.474	ENSXMAG00000021125	smfn	60	82.979	Xiphophorus_maculatus