EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008679 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 14198 bases
Position: chr17:5413102-5427299
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011527	zf-met	PF12874.7	4e-27	1	4
ENSTNIP00000011527	zf-met	PF12874.7	4e-27	2	4
ENSTNIP00000011527	zf-met	PF12874.7	4e-27	3	4
ENSTNIP00000011527	zf-met	PF12874.7	4e-27	4	4
ENSTNIP00000011527	zf-C2H2_jaz	PF12171.8	9.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011709	-	684	-	ENSTNIP00000011527	227 (aa)	-	H3CTE3

Gene Model

Click here to download ENSTNIG00000008679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008679	zgc:171482	92	39.252	ENSTNIG00000002766	-	93	38.636
ENSTNIG00000008679	zgc:171482	99	55.310	ENSTNIG00000018863	zmat4b	99	55.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008679	zgc:171482	100	76.754	ENSAPOG00000019970	zgc:171482	100	76.754	Acanthochromis_polyacanthus
ENSTNIG00000008679	zgc:171482	80	76.522	ENSACIG00000021512	zgc:171482	86	76.522	Amphilophus_citrinellus
ENSTNIG00000008679	zgc:171482	80	69.466	ENSAOCG00000000751	zgc:171482	96	69.466	Amphiprion_ocellaris
ENSTNIG00000008679	zgc:171482	80	70.677	ENSAPEG00000014154	zgc:171482	96	70.677	Amphiprion_percula
ENSTNIG00000008679	zgc:171482	100	75.330	ENSATEG00000001371	zgc:171482	100	75.439	Anabas_testudineus
ENSTNIG00000008679	zgc:171482	80	68.702	ENSACLG00000010511	zgc:171482	91	68.702	Astatotilapia_calliptera
ENSTNIG00000008679	zgc:171482	100	71.806	ENSAMXG00000002299	zgc:171482	100	74.009	Astyanax_mexicanus
ENSTNIG00000008679	zgc:171482	100	54.651	ENSCSEG00000006509	zgc:171482	100	54.651	Cynoglossus_semilaevis
ENSTNIG00000008679	zgc:171482	100	78.947	ENSCVAG00000013606	zgc:171482	100	78.947	Cyprinodon_variegatus
ENSTNIG00000008679	zgc:171482	99	73.362	ENSDARG00000074415	zgc:171482	97	73.362	Danio_rerio
ENSTNIG00000008679	zgc:171482	81	50.538	ENSELUG00000017517	-	60	55.556	Esox_lucius
ENSTNIG00000008679	zgc:171482	80	67.188	ENSELUG00000021817	zgc:171482	88	66.667	Esox_lucius
ENSTNIG00000008679	zgc:171482	51	66.667	ENSELUG00000021794	-	72	79.646	Esox_lucius
ENSTNIG00000008679	zgc:171482	100	77.193	ENSFHEG00000002233	zgc:171482	100	77.193	Fundulus_heteroclitus
ENSTNIG00000008679	zgc:171482	100	75.000	ENSGMOG00000010508	zgc:171482	100	75.000	Gadus_morhua
ENSTNIG00000008679	zgc:171482	100	73.770	ENSGAFG00000009398	zgc:171482	100	56.647	Gambusia_affinis
ENSTNIG00000008679	zgc:171482	100	77.586	ENSGACG00000007680	zgc:171482	100	77.586	Gasterosteus_aculeatus
ENSTNIG00000008679	zgc:171482	80	71.774	ENSHBUG00000023289	zgc:171482	93	71.774	Haplochromis_burtoni
ENSTNIG00000008679	zgc:171482	80	66.412	ENSHCOG00000018086	zgc:171482	96	66.412	Hippocampus_comes
ENSTNIG00000008679	zgc:171482	50	77.193	ENSIPUG00000000356	-	72	84.906	Ictalurus_punctatus
ENSTNIG00000008679	zgc:171482	80	71.304	ENSIPUG00000000361	zgc:171482	83	71.304	Ictalurus_punctatus
ENSTNIG00000008679	zgc:171482	100	73.684	ENSKMAG00000005077	zgc:171482	86	73.684	Kryptolebias_marmoratus
ENSTNIG00000008679	zgc:171482	86	72.093	ENSLBEG00000023823	zgc:171482	90	72.093	Labrus_bergylta
ENSTNIG00000008679	zgc:171482	100	70.925	ENSLOCG00000008863	zgc:171482	97	70.925	Lepisosteus_oculatus
ENSTNIG00000008679	zgc:171482	99	67.407	ENSMAMG00000001031	zgc:171482	94	68.939	Mastacembelus_armatus
ENSTNIG00000008679	zgc:171482	100	76.496	ENSMZEG00005027721	zgc:171482	100	76.496	Maylandia_zebra
ENSTNIG00000008679	zgc:171482	86	71.318	ENSMMOG00000010523	zgc:171482	97	71.318	Mola_mola
ENSTNIG00000008679	zgc:171482	100	79.039	ENSMALG00000017883	zgc:171482	100	79.476	Monopterus_albus
ENSTNIG00000008679	zgc:171482	80	76.106	ENSNBRG00000021035	zgc:171482	84	76.106	Neolamprologus_brichardi
ENSTNIG00000008679	zgc:171482	99	81.057	ENSONIG00000018365	zgc:171482	98	81.057	Oreochromis_niloticus
ENSTNIG00000008679	zgc:171482	100	78.414	ENSORLG00000007607	zgc:171482	100	78.414	Oryzias_latipes
ENSTNIG00000008679	zgc:171482	100	75.109	ENSORLG00020003563	zgc:171482	100	75.109	Oryzias_latipes_hni
ENSTNIG00000008679	zgc:171482	100	78.414	ENSORLG00015008552	zgc:171482	100	78.414	Oryzias_latipes_hsok
ENSTNIG00000008679	zgc:171482	80	76.068	ENSOMEG00000003526	zgc:171482	82	76.068	Oryzias_melastigma
ENSTNIG00000008679	zgc:171482	86	68.595	ENSPKIG00000015911	-	84	68.595	Paramormyrops_kingsleyae
ENSTNIG00000008679	zgc:171482	80	68.182	ENSPKIG00000016244	zgc:171482	83	66.379	Paramormyrops_kingsleyae
ENSTNIG00000008679	zgc:171482	99	75.314	ENSPMGG00000020230	zgc:171482	100	75.314	Periophthalmus_magnuspinnatus
ENSTNIG00000008679	zgc:171482	99	76.151	ENSPFOG00000001974	zgc:171482	96	76.151	Poecilia_formosa
ENSTNIG00000008679	zgc:171482	100	79.295	ENSPLAG00000003327	zgc:171482	100	79.295	Poecilia_latipinna
ENSTNIG00000008679	zgc:171482	100	75.877	ENSPMEG00000004988	zgc:171482	100	75.877	Poecilia_mexicana
ENSTNIG00000008679	zgc:171482	86	72.656	ENSPREG00000019241	zgc:171482	91	72.656	Poecilia_reticulata
ENSTNIG00000008679	zgc:171482	80	68.702	ENSPNYG00000007773	zgc:171482	91	68.702	Pundamilia_nyererei
ENSTNIG00000008679	zgc:171482	99	71.429	ENSPNAG00000007619	zgc:171482	97	73.913	Pygocentrus_nattereri
ENSTNIG00000008679	zgc:171482	80	67.257	ENSSFOG00015016149	zgc:171482	90	67.257	Scleropages_formosus
ENSTNIG00000008679	zgc:171482	80	60.294	ENSSFOG00015021238	zgc:171482	89	60.294	Scleropages_formosus
ENSTNIG00000008679	zgc:171482	80	71.212	ENSSMAG00000002715	zgc:171482	85	71.212	Scophthalmus_maximus
ENSTNIG00000008679	zgc:171482	80	73.016	ENSSDUG00000008773	zgc:171482	89	73.016	Seriola_dumerili
ENSTNIG00000008679	zgc:171482	80	73.016	ENSSLDG00000019510	zgc:171482	89	73.016	Seriola_lalandi_dorsalis
ENSTNIG00000008679	zgc:171482	80	74.194	ENSSPAG00000013724	zgc:171482	98	74.194	Stegastes_partitus
ENSTNIG00000008679	zgc:171482	85	77.419	ENSTRUG00000005705	zgc:171482	74	77.419	Takifugu_rubripes
ENSTNIG00000008679	zgc:171482	84	61.429	ENSXETG00000013525	zmat4	89	61.429	Xenopus_tropicalis
ENSTNIG00000008679	zgc:171482	100	66.393	ENSXMAG00000002641	zgc:171482	100	51.445	Xiphophorus_maculatus