EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008714 (Gene tree)
Gene ID: -
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3890 bases
Position: chrUn_random:89800736-89804625
Accession: ZDB-GENE-061013-298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011565	DND1_DSRM	PF14709.7	8.1e-17	1	1
ENSTNIP00000011565	RRM_1	PF00076.22	5e-35	1	3
ENSTNIP00000011565	RRM_1	PF00076.22	5e-35	2	3
ENSTNIP00000011565	RRM_1	PF00076.22	5e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011747	-	1733	-	ENSTNIP00000011565	530 (aa)	-	H3CTI1

Gene Model

Click here to download ENSTNIG00000008714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008714	rbm46	57	50.825	ENSTNIG00000017299	syncripl	56	50.165
ENSTNIG00000008714	rbm46	57	64.238	ENSTNIG00000006127	rbm47	50	62.914
ENSTNIG00000008714	rbm46	58	50.974	ENSTNIG00000002821	syncrip	55	50.000
ENSTNIG00000008714	rbm46	86	60.738	ENSTNIG00000003580	a1cf	90	58.730

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008714	rbm46	97	56.089	ENSG00000151962	RBM46	90	80.000	Homo_sapiens
ENSTNIG00000008714	rbm46	84	72.889	ENSAPOG00000009209	rbm46	89	73.171	Acanthochromis_polyacanthus
ENSTNIG00000008714	rbm46	95	57.414	ENSAMEG00000013290	RBM46	89	58.600	Ailuropoda_melanoleuca
ENSTNIG00000008714	rbm46	86	66.525	ENSACIG00000014500	rbm46	89	66.311	Amphilophus_citrinellus
ENSTNIG00000008714	rbm46	95	66.667	ENSAOCG00000001892	-	92	68.431	Amphiprion_ocellaris
ENSTNIG00000008714	rbm46	84	71.556	ENSAPEG00000017762	rbm46	97	71.556	Amphiprion_percula
ENSTNIG00000008714	rbm46	88	70.259	ENSATEG00000010775	rbm46	88	70.259	Anabas_testudineus
ENSTNIG00000008714	rbm46	85	62.151	ENSAPLG00000005116	RBM46	97	62.151	Anas_platyrhynchos
ENSTNIG00000008714	rbm46	98	57.386	ENSACAG00000015599	RBM46	89	59.267	Anolis_carolinensis
ENSTNIG00000008714	rbm46	95	57.558	ENSANAG00000029193	RBM46	97	61.111	Aotus_nancymaae
ENSTNIG00000008714	rbm46	98	65.465	ENSACLG00000016153	rbm46	83	68.966	Astatotilapia_calliptera
ENSTNIG00000008714	rbm46	86	64.758	ENSAMXG00000009397	rbm46	99	64.758	Astyanax_mexicanus
ENSTNIG00000008714	rbm46	98	55.762	ENSAMXG00000020892	-	89	59.619	Astyanax_mexicanus
ENSTNIG00000008714	rbm46	92	58.600	ENSBTAG00000001696	RBM46	96	60.125	Bos_taurus
ENSTNIG00000008714	rbm46	98	57.223	ENSCJAG00000001768	RBM46	97	61.853	Callithrix_jacchus
ENSTNIG00000008714	rbm46	98	56.827	ENSCAFG00000008473	RBM46	96	60.125	Canis_familiaris
ENSTNIG00000008714	rbm46	98	56.827	ENSCAFG00020002468	RBM46	95	59.875	Canis_lupus_dingo
ENSTNIG00000008714	rbm46	98	57.169	ENSCHIG00000000502	RBM46	96	60.625	Capra_hircus
ENSTNIG00000008714	rbm46	85	61.538	ENSTSYG00000010435	RBM46	97	61.538	Carlito_syrichta
ENSTNIG00000008714	rbm46	57	75.000	ENSCAPG00000011841	-	80	75.000	Cavia_aperea
ENSTNIG00000008714	rbm46	88	59.290	ENSCAPG00000011928	-	96	59.290	Cavia_aperea
ENSTNIG00000008714	rbm46	95	56.371	ENSCPOG00000019272	-	90	57.172	Cavia_porcellus
ENSTNIG00000008714	rbm46	95	57.088	ENSCPOG00000010284	-	97	60.470	Cavia_porcellus
ENSTNIG00000008714	rbm46	83	62.719	ENSCPOG00000020396	-	89	62.719	Cavia_porcellus
ENSTNIG00000008714	rbm46	98	56.111	ENSCCAG00000027619	-	97	61.325	Cebus_capucinus
ENSTNIG00000008714	rbm46	85	50.107	ENSCCAG00000001323	-	95	49.893	Cebus_capucinus
ENSTNIG00000008714	rbm46	88	59.708	ENSCATG00000040148	RBM46	97	60.897	Cercocebus_atys
ENSTNIG00000008714	rbm46	88	60.211	ENSCLAG00000005846	-	97	61.422	Chinchilla_lanigera
ENSTNIG00000008714	rbm46	85	61.373	ENSCLAG00000011886	-	88	61.373	Chinchilla_lanigera
ENSTNIG00000008714	rbm46	95	57.034	ENSCSAG00000003263	RBM46	89	58.400	Chlorocebus_sabaeus
ENSTNIG00000008714	rbm46	86	60.297	ENSCHOG00000003429	RBM46	88	59.016	Choloepus_hoffmanni
ENSTNIG00000008714	rbm46	81	62.358	ENSCPBG00000009314	RBM46	94	62.812	Chrysemys_picta_bellii
ENSTNIG00000008714	rbm46	88	59.916	ENSCANG00000039065	RBM46	97	61.111	Colobus_angolensis_palliatus
ENSTNIG00000008714	rbm46	95	57.985	ENSCGRG00001016714	Rbm46	97	62.826	Cricetulus_griseus_chok1gshd
ENSTNIG00000008714	rbm46	95	57.985	ENSCGRG00000011738	Rbm46	97	62.826	Cricetulus_griseus_crigri
ENSTNIG00000008714	rbm46	84	62.980	ENSCSEG00000005530	rbm46	95	62.980	Cynoglossus_semilaevis
ENSTNIG00000008714	rbm46	85	66.667	ENSCVAG00000021013	rbm46	94	66.667	Cyprinodon_variegatus
ENSTNIG00000008714	rbm46	99	60.000	ENSDARG00000079452	rbm46	98	60.694	Danio_rerio
ENSTNIG00000008714	rbm46	95	57.224	ENSDNOG00000016195	RBM46	89	58.400	Dasypus_novemcinctus
ENSTNIG00000008714	rbm46	95	57.795	ENSDORG00000006405	Rbm46	97	62.826	Dipodomys_ordii
ENSTNIG00000008714	rbm46	85	61.456	ENSETEG00000014902	RBM46	85	61.456	Echinops_telfairi
ENSTNIG00000008714	rbm46	98	56.134	ENSEASG00005015821	RBM46	89	58.483	Equus_asinus_asinus
ENSTNIG00000008714	rbm46	88	60.000	ENSECAG00000007649	RBM46	96	60.000	Equus_caballus
ENSTNIG00000008714	rbm46	97	54.074	ENSEEUG00000011824	RBM46	89	56.800	Erinaceus_europaeus
ENSTNIG00000008714	rbm46	69	69.437	ENSELUG00000008166	rbm46	98	67.183	Esox_lucius
ENSTNIG00000008714	rbm46	95	58.621	ENSFCAG00000029812	RBM46	97	61.752	Felis_catus
ENSTNIG00000008714	rbm46	88	60.000	ENSFALG00000013157	RBM46	92	60.000	Ficedula_albicollis
ENSTNIG00000008714	rbm46	85	60.907	ENSFDAG00000006445	-	90	60.907	Fukomys_damarensis
ENSTNIG00000008714	rbm46	98	55.741	ENSFDAG00000019281	-	89	57.430	Fukomys_damarensis
ENSTNIG00000008714	rbm46	87	60.606	ENSFHEG00000013257	rbm46	93	64.524	Fundulus_heteroclitus
ENSTNIG00000008714	rbm46	86	56.838	ENSGALG00000009278	RBM46	97	56.838	Gallus_gallus
ENSTNIG00000008714	rbm46	65	80.573	ENSGAFG00000020245	rbm46	85	80.573	Gambusia_affinis
ENSTNIG00000008714	rbm46	85	62.121	ENSGAGG00000002019	RBM46	86	62.554	Gopherus_agassizii
ENSTNIG00000008714	rbm46	95	57.034	ENSGGOG00000001876	RBM46	97	61.111	Gorilla_gorilla
ENSTNIG00000008714	rbm46	86	64.989	ENSHBUG00000009609	rbm46	94	69.626	Haplochromis_burtoni
ENSTNIG00000008714	rbm46	81	61.872	ENSHGLG00000002463	-	96	63.357	Heterocephalus_glaber_female
ENSTNIG00000008714	rbm46	94	49.412	ENSHGLG00000002940	-	85	52.412	Heterocephalus_glaber_female
ENSTNIG00000008714	rbm46	80	55.172	ENSHGLG00000010742	-	82	54.483	Heterocephalus_glaber_female
ENSTNIG00000008714	rbm46	80	55.172	ENSHGLG00100004977	-	82	54.483	Heterocephalus_glaber_male
ENSTNIG00000008714	rbm46	94	47.451	ENSHGLG00100018987	-	85	50.219	Heterocephalus_glaber_male
ENSTNIG00000008714	rbm46	94	56.731	ENSHGLG00100012752	-	97	61.656	Heterocephalus_glaber_male
ENSTNIG00000008714	rbm46	88	50.644	ENSHCOG00000012998	rbm46	89	52.018	Hippocampus_comes
ENSTNIG00000008714	rbm46	88	60.941	ENSIPUG00000024038	rbm46	98	62.168	Ictalurus_punctatus
ENSTNIG00000008714	rbm46	95	57.414	ENSSTOG00000007918	RBM46	97	61.325	Ictidomys_tridecemlineatus
ENSTNIG00000008714	rbm46	85	62.876	ENSJJAG00000003902	Rbm46	97	62.876	Jaculus_jaculus
ENSTNIG00000008714	rbm46	97	65.504	ENSKMAG00000015127	rbm46	85	71.556	Kryptolebias_marmoratus
ENSTNIG00000008714	rbm46	86	61.765	ENSLACG00000002062	RBM46	87	61.765	Latimeria_chalumnae
ENSTNIG00000008714	rbm46	85	64.719	ENSLOCG00000008298	rbm46	95	65.419	Lepisosteus_oculatus
ENSTNIG00000008714	rbm46	85	61.538	ENSLAFG00000015448	RBM46	97	61.538	Loxodonta_africana
ENSTNIG00000008714	rbm46	88	59.916	ENSMFAG00000043485	RBM46	97	61.111	Macaca_fascicularis
ENSTNIG00000008714	rbm46	88	59.916	ENSMMUG00000021147	RBM46	96	59.916	Macaca_mulatta
ENSTNIG00000008714	rbm46	88	59.916	ENSMNEG00000002787	RBM46	97	61.111	Macaca_nemestrina
ENSTNIG00000008714	rbm46	88	59.708	ENSMLEG00000029756	RBM46	97	60.897	Mandrillus_leucophaeus
ENSTNIG00000008714	rbm46	85	73.778	ENSMAMG00000009093	rbm46	98	66.988	Mastacembelus_armatus
ENSTNIG00000008714	rbm46	92	66.872	ENSMZEG00005027849	rbm46	99	67.485	Maylandia_zebra
ENSTNIG00000008714	rbm46	83	58.371	ENSMGAG00000001457	RBM46	98	57.050	Meleagris_gallopavo
ENSTNIG00000008714	rbm46	95	57.985	ENSMAUG00000009911	Rbm46	97	62.826	Mesocricetus_auratus
ENSTNIG00000008714	rbm46	95	57.034	ENSMICG00000042747	RBM46	97	60.897	Microcebus_murinus
ENSTNIG00000008714	rbm46	95	57.985	ENSMOCG00000001188	Rbm46	97	61.966	Microtus_ochrogaster
ENSTNIG00000008714	rbm46	86	69.935	ENSMMOG00000011214	rbm46	87	69.935	Mola_mola
ENSTNIG00000008714	rbm46	92	58.614	ENSMODG00000001302	RBM46	81	60.455	Monodelphis_domestica
ENSTNIG00000008714	rbm46	81	69.930	ENSMALG00000006185	rbm46	89	70.922	Monopterus_albus
ENSTNIG00000008714	rbm46	95	57.985	MGP_CAROLIEiJ_G0025101	Rbm46	97	62.826	Mus_caroli
ENSTNIG00000008714	rbm46	95	58.175	ENSMUSG00000033882	Rbm46	97	63.043	Mus_musculus
ENSTNIG00000008714	rbm46	95	57.495	MGP_PahariEiJ_G0026544	Rbm46	97	61.407	Mus_pahari
ENSTNIG00000008714	rbm46	95	58.365	MGP_SPRETEiJ_G0026043	Rbm46	97	63.261	Mus_spretus
ENSTNIG00000008714	rbm46	88	60.125	ENSMPUG00000005670	RBM46	96	60.125	Mustela_putorius_furo
ENSTNIG00000008714	rbm46	95	57.306	ENSMLUG00000003221	RBM46	89	58.918	Myotis_lucifugus
ENSTNIG00000008714	rbm46	92	59.756	ENSNGAG00000004231	Rbm46	97	62.609	Nannospalax_galili
ENSTNIG00000008714	rbm46	86	69.365	ENSNBRG00000000273	rbm46	87	68.980	Neolamprologus_brichardi
ENSTNIG00000008714	rbm46	88	59.708	ENSNLEG00000006184	RBM46	97	60.897	Nomascus_leucogenys
ENSTNIG00000008714	rbm46	78	61.305	ENSMEUG00000013328	RBM46	99	61.337	Notamacropus_eugenii
ENSTNIG00000008714	rbm46	51	75.556	ENSOPRG00000007136	RBM46	95	77.037	Ochotona_princeps
ENSTNIG00000008714	rbm46	87	60.381	ENSODEG00000018002	-	90	60.381	Octodon_degus
ENSTNIG00000008714	rbm46	98	56.285	ENSODEG00000000735	-	97	61.488	Octodon_degus
ENSTNIG00000008714	rbm46	85	66.453	ENSONIG00000014096	rbm46	97	67.735	Oreochromis_niloticus
ENSTNIG00000008714	rbm46	88	61.263	ENSOANG00000002141	RBM46	96	61.263	Ornithorhynchus_anatinus
ENSTNIG00000008714	rbm46	95	57.414	ENSOCUG00000017859	RBM46	89	58.600	Oryctolagus_cuniculus
ENSTNIG00000008714	rbm46	87	65.359	ENSORLG00000002429	rbm46	92	66.667	Oryzias_latipes
ENSTNIG00000008714	rbm46	85	66.157	ENSORLG00020022154	rbm46	85	66.173	Oryzias_latipes_hni
ENSTNIG00000008714	rbm46	90	63.750	ENSORLG00015020234	rbm46	94	66.385	Oryzias_latipes_hsok
ENSTNIG00000008714	rbm46	84	65.256	ENSOMEG00000022580	rbm46	88	65.011	Oryzias_melastigma
ENSTNIG00000008714	rbm46	95	57.414	ENSOGAG00000005647	RBM46	89	58.600	Otolemur_garnettii
ENSTNIG00000008714	rbm46	98	56.716	ENSOARG00000016406	RBM46	96	60.125	Ovis_aries
ENSTNIG00000008714	rbm46	88	59.916	ENSPPAG00000043236	RBM46	97	61.111	Pan_paniscus
ENSTNIG00000008714	rbm46	98	56.618	ENSPPRG00000009416	RBM46	97	61.538	Panthera_pardus
ENSTNIG00000008714	rbm46	98	56.618	ENSPTIG00000017449	RBM46	97	61.538	Panthera_tigris_altaica
ENSTNIG00000008714	rbm46	88	59.916	ENSPTRG00000016538	RBM46	97	61.111	Pan_troglodytes
ENSTNIG00000008714	rbm46	98	56.052	ENSPANG00000004186	RBM46	97	61.111	Papio_anubis
ENSTNIG00000008714	rbm46	84	64.745	ENSPKIG00000015334	rbm46	78	64.745	Paramormyrops_kingsleyae
ENSTNIG00000008714	rbm46	85	62.284	ENSPSIG00000006429	RBM46	93	62.716	Pelodiscus_sinensis
ENSTNIG00000008714	rbm46	86	82.437	ENSPMGG00000019872	rbm46	95	83.824	Periophthalmus_magnuspinnatus
ENSTNIG00000008714	rbm46	95	57.985	ENSPEMG00000013899	Rbm46	97	62.826	Peromyscus_maniculatus_bairdii
ENSTNIG00000008714	rbm46	95	58.365	ENSPCIG00000029626	RBM46	96	60.960	Phascolarctos_cinereus
ENSTNIG00000008714	rbm46	80	79.321	ENSPFOG00000001079	rbm46	79	79.321	Poecilia_formosa
ENSTNIG00000008714	rbm46	97	66.216	ENSPLAG00000004541	rbm46	81	70.716	Poecilia_latipinna
ENSTNIG00000008714	rbm46	95	66.998	ENSPMEG00000015724	rbm46	92	71.239	Poecilia_mexicana
ENSTNIG00000008714	rbm46	97	66.216	ENSPREG00000014464	rbm46	97	70.000	Poecilia_reticulata
ENSTNIG00000008714	rbm46	98	56.481	ENSPPYG00000015144	RBM46	89	58.400	Pongo_abelii
ENSTNIG00000008714	rbm46	98	53.704	ENSPCAG00000003110	RBM46	85	58.458	Procavia_capensis
ENSTNIG00000008714	rbm46	97	56.089	ENSPCOG00000024347	RBM46	97	60.897	Propithecus_coquereli
ENSTNIG00000008714	rbm46	95	57.414	ENSPVAG00000008376	RBM46	86	60.805	Pteropus_vampyrus
ENSTNIG00000008714	rbm46	97	61.842	ENSPNAG00000025312	rbm46	88	66.810	Pygocentrus_nattereri
ENSTNIG00000008714	rbm46	95	57.795	ENSRNOG00000025823	Rbm46	86	62.284	Rattus_norvegicus
ENSTNIG00000008714	rbm46	88	59.875	ENSRBIG00000032583	RBM46	97	60.897	Rhinopithecus_bieti
ENSTNIG00000008714	rbm46	88	59.499	ENSRROG00000044288	RBM46	97	60.684	Rhinopithecus_roxellana
ENSTNIG00000008714	rbm46	98	55.926	ENSSBOG00000033028	RBM46	97	61.111	Saimiri_boliviensis_boliviensis
ENSTNIG00000008714	rbm46	95	58.175	ENSSHAG00000012596	RBM46	89	59.400	Sarcophilus_harrisii
ENSTNIG00000008714	rbm46	97	58.509	ENSSFOG00015000087	rbm46	89	61.618	Scleropages_formosus
ENSTNIG00000008714	rbm46	84	68.161	ENSSMAG00000017042	rbm46	93	68.161	Scophthalmus_maximus
ENSTNIG00000008714	rbm46	97	68.275	ENSSDUG00000020645	rbm46	89	74.672	Seriola_dumerili
ENSTNIG00000008714	rbm46	98	56.425	ENSSARG00000006520	RBM46	89	58.800	Sorex_araneus
ENSTNIG00000008714	rbm46	90	61.123	ENSSPUG00000004773	-	96	61.864	Sphenodon_punctatus
ENSTNIG00000008714	rbm46	98	57.486	ENSSPUG00000012525	-	85	62.527	Sphenodon_punctatus
ENSTNIG00000008714	rbm46	86	67.544	ENSSPAG00000013697	rbm46	95	67.544	Stegastes_partitus
ENSTNIG00000008714	rbm46	86	61.783	ENSSSCG00000008994	RBM46	94	61.803	Sus_scrofa
ENSTNIG00000008714	rbm46	85	60.304	ENSTGUG00000005307	RBM46	97	60.304	Taeniopygia_guttata
ENSTNIG00000008714	rbm46	86	82.276	ENSTRUG00000004237	rbm46	92	82.057	Takifugu_rubripes
ENSTNIG00000008714	rbm46	98	56.030	ENSTBEG00000013949	RBM46	89	57.715	Tupaia_belangeri
ENSTNIG00000008714	rbm46	86	61.229	ENSTTRG00000001239	RBM46	86	61.653	Tursiops_truncatus
ENSTNIG00000008714	rbm46	98	56.238	ENSUAMG00000026593	RBM46	96	60.125	Ursus_americanus
ENSTNIG00000008714	rbm46	98	56.425	ENSUMAG00000016442	RBM46	96	60.334	Ursus_maritimus
ENSTNIG00000008714	rbm46	98	56.827	ENSVVUG00000024957	RBM46	97	61.242	Vulpes_vulpes
ENSTNIG00000008714	rbm46	84	41.253	ENSXETG00000032344	-	84	41.253	Xenopus_tropicalis
ENSTNIG00000008714	rbm46	84	60.532	ENSXETG00000022412	-	83	60.532	Xenopus_tropicalis
ENSTNIG00000008714	rbm46	67	56.620	ENSXETG00000032067	-	93	57.865	Xenopus_tropicalis
ENSTNIG00000008714	rbm46	85	67.666	ENSXMAG00000008237	rbm46	90	67.811	Xiphophorus_maculatus