EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSTNIG00000008717 (Gene tree)
Gene ID: -
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 5527 bases
Position: chrUn_random:89929192-89934718
Accession: ZDB-GENE-030131-3980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011568	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011750	-	621	-	ENSTNIP00000011568	206 (aa)	-	H3CTI4

Gene Model

Click here to download ENSTNIG00000008717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008717	rab18a	79	38.323	ENSTNIG00000014604	RAB7A	81	38.323
ENSTNIG00000008717	rab18a	79	38.037	ENSTNIG00000001448	-	96	38.037
ENSTNIG00000008717	rab18a	78	45.679	ENSTNIG00000013184	-	74	45.679
ENSTNIG00000008717	rab18a	58	30.328	ENSTNIG00000005852	arl8	63	30.328
ENSTNIG00000008717	rab18a	87	31.771	ENSTNIG00000016158	rab34b	73	31.771
ENSTNIG00000008717	rab18a	83	37.209	ENSTNIG00000016575	rab23	73	37.209
ENSTNIG00000008717	rab18a	88	39.891	ENSTNIG00000018267	rab22a	93	39.891
ENSTNIG00000008717	rab18a	73	52.318	ENSTNIG00000004511	-	93	52.318
ENSTNIG00000008717	rab18a	74	42.236	ENSTNIG00000012343	-	68	42.236
ENSTNIG00000008717	rab18a	78	39.634	ENSTNIG00000001043	si:ch211-247i17.1	78	39.634
ENSTNIG00000008717	rab18a	98	39.904	ENSTNIG00000011711	rab5c	94	39.904
ENSTNIG00000008717	rab18a	83	38.506	ENSTNIG00000016831	RAB41	79	38.506
ENSTNIG00000008717	rab18a	83	32.353	ENSTNIG00000013137	ran	77	32.353
ENSTNIG00000008717	rab18a	78	37.576	ENSTNIG00000010122	rab33a	71	37.576
ENSTNIG00000008717	rab18a	72	42.667	ENSTNIG00000010125	rab33ba	63	42.667
ENSTNIG00000008717	rab18a	83	43.605	ENSTNIG00000013182	-	79	43.605
ENSTNIG00000008717	rab18a	85	39.548	ENSTNIG00000006650	RAB19	81	39.548
ENSTNIG00000008717	rab18a	78	41.916	ENSTNIG00000005090	rab25a	76	41.916
ENSTNIG00000008717	rab18a	83	39.080	ENSTNIG00000003679	-	81	39.080
ENSTNIG00000008717	rab18a	84	35.196	ENSTNIG00000016231	rab34a	68	35.196
ENSTNIG00000008717	rab18a	88	32.065	ENSTNIG00000012154	kras	97	32.065
ENSTNIG00000008717	rab18a	81	43.452	ENSTNIG00000018498	-	74	43.452
ENSTNIG00000008717	rab18a	78	31.928	ENSTNIG00000006596	dnajc27	61	31.928
ENSTNIG00000008717	rab18a	77	45.625	ENSTNIG00000002003	-	78	45.625
ENSTNIG00000008717	rab18a	70	42.069	ENSTNIG00000008784	-	89	42.069
ENSTNIG00000008717	rab18a	79	38.323	ENSTNIG00000011114	-	81	38.323
ENSTNIG00000008717	rab18a	83	45.029	ENSTNIG00000011300	si:dkey-16l2.16	81	45.029
ENSTNIG00000008717	rab18a	57	30.769	ENSTNIG00000006917	si:cabz01085950.1	88	30.769
ENSTNIG00000008717	rab18a	76	38.608	ENSTNIG00000017844	-	84	38.608
ENSTNIG00000008717	rab18a	89	39.572	ENSTNIG00000009196	rab5aa	86	39.572
ENSTNIG00000008717	rab18a	79	37.725	ENSTNIG00000001195	rab9a	83	37.725
ENSTNIG00000008717	rab18a	81	31.176	ENSTNIG00000013920	rab20	69	31.176
ENSTNIG00000008717	rab18a	99	79.024	ENSTNIG00000007882	rab18b	99	79.024
ENSTNIG00000008717	rab18a	83	39.766	ENSTNIG00000015257	rab6bb	80	39.766
ENSTNIG00000008717	rab18a	81	32.530	ENSTNIG00000011385	hrasb	87	32.530
ENSTNIG00000008717	rab18a	82	36.471	ENSTNIG00000007566	si:ch73-116o1.2	81	36.471
ENSTNIG00000008717	rab18a	80	44.706	ENSTNIG00000004004	-	92	44.706
ENSTNIG00000008717	rab18a	79	37.952	ENSTNIG00000001956	RAB9A	79	37.952
ENSTNIG00000008717	rab18a	83	43.605	ENSTNIG00000011081	rab11bb	78	43.605
ENSTNIG00000008717	rab18a	87	47.027	ENSTNIG00000003472	rab2a	97	43.810
ENSTNIG00000008717	rab18a	79	46.012	ENSTNIG00000014859	rab12	67	46.012
ENSTNIG00000008717	rab18a	79	48.171	ENSTNIG00000009039	rab14	74	48.171
ENSTNIG00000008717	rab18a	79	46.951	ENSTNIG00000018319	-	82	46.951
ENSTNIG00000008717	rab18a	86	32.418	ENSTNIG00000014591	rheb	91	32.418
ENSTNIG00000008717	rab18a	80	43.713	ENSTNIG00000001260	RAB15	77	43.713
ENSTNIG00000008717	rab18a	85	34.637	ENSTNIG00000017951	rabl2	78	34.637
ENSTNIG00000008717	rab18a	79	44.785	ENSTNIG00000016414	rab15	76	44.785
ENSTNIG00000008717	rab18a	71	44.595	ENSTNIG00000015000	zgc:101559	63	44.595