EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008784 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1368 bases
Position: chr13:2340622-2341989
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011633	MMR_HSR1	PF01926.23	8.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000011821	-	489	-	ENSTNIP00000011633	162 (aa)	-	H3CTP9

Gene Model

Click here to download ENSTNIG00000008784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008784	-	96	38.065	ENSTNIG00000002003	-	76	38.065
ENSTNIG00000008784	-	99	37.576	ENSTNIG00000011114	-	79	37.576
ENSTNIG00000008784	-	99	38.509	ENSTNIG00000009196	rab5aa	75	38.509
ENSTNIG00000008784	-	98	30.061	ENSTNIG00000007566	si:ch73-116o1.2	77	30.061
ENSTNIG00000008784	-	90	38.776	ENSTNIG00000010125	rab33ba	61	38.776
ENSTNIG00000008784	-	90	34.247	ENSTNIG00000010122	rab33a	63	34.247
ENSTNIG00000008784	-	85	31.884	ENSTNIG00000011385	hrasb	84	31.875
ENSTNIG00000008784	-	99	40.000	ENSTNIG00000013182	-	74	40.000
ENSTNIG00000008784	-	90	36.735	ENSTNIG00000015000	zgc:101559	62	36.735
ENSTNIG00000008784	-	85	30.435	ENSTNIG00000012154	kras	84	30.625
ENSTNIG00000008784	-	89	42.069	ENSTNIG00000008717	rab18a	70	42.069
ENSTNIG00000008784	-	90	33.562	ENSTNIG00000016575	rab23	67	36.076
ENSTNIG00000008784	-	93	46.000	ENSTNIG00000015257	rab6bb	72	46.000
ENSTNIG00000008784	-	95	40.260	ENSTNIG00000003472	rab2a	72	40.260
ENSTNIG00000008784	-	93	30.464	ENSTNIG00000017951	rabl2	66	30.464
ENSTNIG00000008784	-	99	35.928	ENSTNIG00000001195	rab9a	81	35.928
ENSTNIG00000008784	-	99	65.839	ENSTNIG00000001448	-	96	65.839
ENSTNIG00000008784	-	94	39.869	ENSTNIG00000011300	si:dkey-16l2.16	73	39.869
ENSTNIG00000008784	-	93	45.098	ENSTNIG00000016831	RAB41	71	45.098
ENSTNIG00000008784	-	88	34.211	ENSTNIG00000014591	rheb	78	34.211
ENSTNIG00000008784	-	98	34.969	ENSTNIG00000003679	-	76	34.969
ENSTNIG00000008784	-	99	33.125	ENSTNIG00000009039	rab14	73	33.125
ENSTNIG00000008784	-	100	50.617	ENSTNIG00000018319	-	81	50.617
ENSTNIG00000008784	-	99	40.000	ENSTNIG00000011081	rab11bb	73	40.000
ENSTNIG00000008784	-	97	36.875	ENSTNIG00000016231	rab34a	62	36.875
ENSTNIG00000008784	-	98	51.250	ENSTNIG00000001043	si:ch211-247i17.1	79	51.250
ENSTNIG00000008784	-	99	35.329	ENSTNIG00000001956	RAB9A	78	35.329
ENSTNIG00000008784	-	93	30.769	ENSTNIG00000006596	dnajc27	57	30.769
ENSTNIG00000008784	-	98	35.849	ENSTNIG00000017844	-	84	35.849
ENSTNIG00000008784	-	99	43.478	ENSTNIG00000001260	RAB15	76	43.478
ENSTNIG00000008784	-	99	37.576	ENSTNIG00000014604	RAB7A	79	37.576
ENSTNIG00000008784	-	100	38.650	ENSTNIG00000006650	RAB19	75	38.650
ENSTNIG00000008784	-	99	36.646	ENSTNIG00000011711	rab5c	73	36.646
ENSTNIG00000008784	-	89	41.379	ENSTNIG00000007882	rab18b	70	41.379
ENSTNIG00000008784	-	100	38.037	ENSTNIG00000018498	-	72	38.037
ENSTNIG00000008784	-	99	31.609	ENSTNIG00000003649	rasl11a	74	31.609
ENSTNIG00000008784	-	94	42.484	ENSTNIG00000004511	-	95	42.484
ENSTNIG00000008784	-	97	35.625	ENSTNIG00000016158	rab34b	62	35.625
ENSTNIG00000008784	-	75	33.600	ENSTNIG00000006917	si:cabz01085950.1	93	33.600
ENSTNIG00000008784	-	94	39.869	ENSTNIG00000004004	-	84	39.869
ENSTNIG00000008784	-	98	32.704	ENSTNIG00000018267	rab22a	82	32.704
ENSTNIG00000008784	-	83	34.815	ENSTNIG00000013920	rab20	55	34.815
ENSTNIG00000008784	-	90	38.158	ENSTNIG00000012343	-	64	38.158
ENSTNIG00000008784	-	99	40.000	ENSTNIG00000013184	-	73	40.000
ENSTNIG00000008784	-	99	39.752	ENSTNIG00000014859	rab12	66	39.752
ENSTNIG00000008784	-	93	38.217	ENSTNIG00000005090	rab25a	72	38.217
ENSTNIG00000008784	-	99	46.584	ENSTNIG00000016414	rab15	76	46.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008784	-	96	58.065	ENSACAG00000016658	-	82	58.065	Anolis_carolinensis
ENSTNIG00000008784	-	84	51.724	ENSETEG00000008991	-	94	51.724	Echinops_telfairi
ENSTNIG00000008784	-	99	58.750	ENSFALG00000003276	-	76	58.750	Ficedula_albicollis
ENSTNIG00000008784	-	99	67.500	ENSGMOG00000018741	-	75	67.500	Gadus_morhua
ENSTNIG00000008784	-	100	65.432	ENSGACG00000019767	-	82	65.432	Gasterosteus_aculeatus
ENSTNIG00000008784	-	94	52.941	ENSLAFG00000000202	-	87	52.941	Loxodonta_africana
ENSTNIG00000008784	-	100	58.642	ENSMGAG00000002516	-	72	58.642	Meleagris_gallopavo
ENSTNIG00000008784	-	100	51.852	ENSMUSG00000064147	Rab44	62	51.852	Mus_musculus
ENSTNIG00000008784	-	100	56.173	ENSMPUG00000014188	-	66	56.173	Mustela_putorius_furo
ENSTNIG00000008784	-	91	48.993	ENSMLUG00000010706	-	82	48.993	Myotis_lucifugus
ENSTNIG00000008784	-	84	54.167	ENSMEUG00000004712	-	96	54.167	Notamacropus_eugenii
ENSTNIG00000008784	-	63	49.091	ENSOPRG00000006034	-	92	49.091	Ochotona_princeps
ENSTNIG00000008784	-	100	67.284	ENSONIG00000011542	-	100	67.284	Oreochromis_niloticus
ENSTNIG00000008784	-	96	61.290	ENSPSIG00000002522	-	100	61.290	Pelodiscus_sinensis
ENSTNIG00000008784	-	84	50.694	ENSPVAG00000014624	-	94	50.694	Pteropus_vampyrus
ENSTNIG00000008784	-	100	58.642	ENSTGUG00000017468	-	77	58.642	Taeniopygia_guttata