EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000008958 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3536 bases
Position: chr1:1464156-1467691
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011812	Sua5_yciO_yrdC	PF01300.18	2.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012002	-	2496	-	ENSTNIP00000011812	832 (aa)	-	H3CU78

Gene Model

Click here to download ENSTNIG00000008958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000008958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000008958	si:ch211-153b23.4	63	30.492	ENSTNIG00000008962	si:ch211-153b23.3	54	30.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000008958	si:ch211-153b23.4	94	80.510	ENSAPOG00000006144	si:ch211-153b23.4	90	81.380	Acanthochromis_polyacanthus
ENSTNIG00000008958	si:ch211-153b23.4	99	77.670	ENSAPOG00000006178	si:ch211-153b23.4	90	81.218	Acanthochromis_polyacanthus
ENSTNIG00000008958	si:ch211-153b23.4	96	80.702	ENSACIG00000006997	si:ch211-153b23.4	93	80.702	Amphilophus_citrinellus
ENSTNIG00000008958	si:ch211-153b23.4	94	76.081	ENSAOCG00000010999	si:ch211-153b23.4	97	75.156	Amphiprion_ocellaris
ENSTNIG00000008958	si:ch211-153b23.4	97	77.363	ENSAPEG00000014665	si:ch211-153b23.4	94	77.363	Amphiprion_percula
ENSTNIG00000008958	si:ch211-153b23.4	99	80.097	ENSATEG00000004948	si:ch211-153b23.4	94	80.097	Anabas_testudineus
ENSTNIG00000008958	si:ch211-153b23.4	99	60.434	ENSAPLG00000013596	-	99	60.434	Anas_platyrhynchos
ENSTNIG00000008958	si:ch211-153b23.4	100	77.644	ENSACLG00000005471	si:ch211-153b23.4	94	77.644	Astatotilapia_calliptera
ENSTNIG00000008958	si:ch211-153b23.4	97	71.393	ENSAMXG00000013879	si:ch211-153b23.4	95	71.270	Astyanax_mexicanus
ENSTNIG00000008958	si:ch211-153b23.4	62	32.381	ENSCSEG00000014853	si:ch211-153b23.3	58	32.381	Cynoglossus_semilaevis
ENSTNIG00000008958	si:ch211-153b23.4	99	75.453	ENSCSEG00000014838	si:ch211-153b23.4	98	75.453	Cynoglossus_semilaevis
ENSTNIG00000008958	si:ch211-153b23.4	97	77.778	ENSCVAG00000021145	si:ch211-153b23.4	100	77.778	Cyprinodon_variegatus
ENSTNIG00000008958	si:ch211-153b23.4	99	68.275	ENSDARG00000077169	si:ch211-153b23.4	94	68.193	Danio_rerio
ENSTNIG00000008958	si:ch211-153b23.4	100	69.341	ENSELUG00000004961	si:ch211-153b23.4	94	69.341	Esox_lucius
ENSTNIG00000008958	si:ch211-153b23.4	98	56.469	ENSFALG00000011343	-	94	56.469	Ficedula_albicollis
ENSTNIG00000008958	si:ch211-153b23.4	85	86.432	ENSFHEG00000009888	si:ch211-153b23.4	79	86.432	Fundulus_heteroclitus
ENSTNIG00000008958	si:ch211-153b23.4	96	77.307	ENSFHEG00000010001	si:ch211-153b23.4	100	77.307	Fundulus_heteroclitus
ENSTNIG00000008958	si:ch211-153b23.4	94	76.864	ENSGAFG00000007442	si:ch211-153b23.4	93	76.864	Gambusia_affinis
ENSTNIG00000008958	si:ch211-153b23.4	99	77.791	ENSGACG00000018253	si:ch211-153b23.4	97	77.791	Gasterosteus_aculeatus
ENSTNIG00000008958	si:ch211-153b23.4	84	62.947	ENSGAGG00000024601	-	93	62.947	Gopherus_agassizii
ENSTNIG00000008958	si:ch211-153b23.4	81	77.712	ENSHBUG00000000013	si:ch211-153b23.4	89	77.712	Haplochromis_burtoni
ENSTNIG00000008958	si:ch211-153b23.4	99	68.472	ENSIPUG00000015205	si:ch211-153b23.4	99	68.472	Ictalurus_punctatus
ENSTNIG00000008958	si:ch211-153b23.4	98	78.896	ENSKMAG00000006829	si:ch211-153b23.4	99	78.870	Kryptolebias_marmoratus
ENSTNIG00000008958	si:ch211-153b23.4	99	78.700	ENSKMAG00000006919	-	94	78.700	Kryptolebias_marmoratus
ENSTNIG00000008958	si:ch211-153b23.4	99	79.976	ENSLBEG00000026309	si:ch211-153b23.4	94	79.976	Labrus_bergylta
ENSTNIG00000008958	si:ch211-153b23.4	99	61.306	ENSLACG00000017592	si:ch211-153b23.4	99	61.306	Latimeria_chalumnae
ENSTNIG00000008958	si:ch211-153b23.4	96	81.671	ENSMAMG00000009277	si:ch211-153b23.4	96	81.671	Mastacembelus_armatus
ENSTNIG00000008958	si:ch211-153b23.4	97	81.235	ENSMAMG00000009358	si:ch211-153b23.4	99	81.111	Mastacembelus_armatus
ENSTNIG00000008958	si:ch211-153b23.4	97	78.025	ENSMZEG00005011433	si:ch211-153b23.4	99	78.025	Maylandia_zebra
ENSTNIG00000008958	si:ch211-153b23.4	99	59.541	ENSMGAG00000005478	-	99	59.541	Meleagris_gallopavo
ENSTNIG00000008958	si:ch211-153b23.4	97	80.741	ENSMMOG00000004425	si:ch211-153b23.4	100	80.617	Mola_mola
ENSTNIG00000008958	si:ch211-153b23.4	96	77.945	ENSNBRG00000013392	si:ch211-153b23.4	100	77.945	Neolamprologus_brichardi
ENSTNIG00000008958	si:ch211-153b23.4	99	77.509	ENSONIG00000017875	si:ch211-153b23.4	95	77.509	Oreochromis_niloticus
ENSTNIG00000008958	si:ch211-153b23.4	99	76.294	ENSORLG00000006169	si:ch211-153b23.4	95	76.294	Oryzias_latipes
ENSTNIG00000008958	si:ch211-153b23.4	99	77.016	ENSORLG00020009905	si:ch211-153b23.4	95	77.016	Oryzias_latipes_hni
ENSTNIG00000008958	si:ch211-153b23.4	99	76.534	ENSORLG00015003709	si:ch211-153b23.4	95	76.534	Oryzias_latipes_hsok
ENSTNIG00000008958	si:ch211-153b23.4	99	77.146	ENSOMEG00000007682	si:ch211-153b23.4	94	77.146	Oryzias_melastigma
ENSTNIG00000008958	si:ch211-153b23.4	54	32.969	ENSPKIG00000022450	si:ch211-153b23.3	53	32.969	Paramormyrops_kingsleyae
ENSTNIG00000008958	si:ch211-153b23.4	99	66.424	ENSPKIG00000025681	si:ch211-153b23.4	96	66.424	Paramormyrops_kingsleyae
ENSTNIG00000008958	si:ch211-153b23.4	99	64.727	ENSPKIG00000014429	si:ch211-153b23.4	96	64.436	Paramormyrops_kingsleyae
ENSTNIG00000008958	si:ch211-153b23.4	95	63.889	ENSPMGG00000001313	si:ch211-153b23.4	86	63.943	Periophthalmus_magnuspinnatus
ENSTNIG00000008958	si:ch211-153b23.4	62	31.629	ENSPFOG00000012289	si:ch211-153b23.3	59	31.629	Poecilia_formosa
ENSTNIG00000008958	si:ch211-153b23.4	81	78.792	ENSPFOG00000012164	si:ch211-153b23.4	95	78.792	Poecilia_formosa
ENSTNIG00000008958	si:ch211-153b23.4	97	76.770	ENSPLAG00000016295	si:ch211-153b23.4	99	76.770	Poecilia_latipinna
ENSTNIG00000008958	si:ch211-153b23.4	95	75.189	ENSPMEG00000007538	si:ch211-153b23.4	96	75.189	Poecilia_mexicana
ENSTNIG00000008958	si:ch211-153b23.4	97	78.025	ENSPNYG00000000250	si:ch211-153b23.4	99	78.025	Pundamilia_nyererei
ENSTNIG00000008958	si:ch211-153b23.4	99	71.429	ENSPNAG00000019554	si:ch211-153b23.4	93	71.429	Pygocentrus_nattereri
ENSTNIG00000008958	si:ch211-153b23.4	99	70.517	ENSSFOG00015010891	si:ch211-153b23.4	95	70.517	Scleropages_formosus
ENSTNIG00000008958	si:ch211-153b23.4	99	67.225	ENSSFOG00015003920	-	95	67.225	Scleropages_formosus
ENSTNIG00000008958	si:ch211-153b23.4	99	80.947	ENSSMAG00000010067	si:ch211-153b23.4	95	80.947	Scophthalmus_maximus
ENSTNIG00000008958	si:ch211-153b23.4	97	80.741	ENSSDUG00000006671	si:ch211-153b23.4	100	80.741	Seriola_dumerili
ENSTNIG00000008958	si:ch211-153b23.4	81	79.911	ENSSDUG00000006931	si:ch211-153b23.4	92	79.911	Seriola_dumerili
ENSTNIG00000008958	si:ch211-153b23.4	86	82.331	ENSSDUG00000006842	si:ch211-153b23.4	91	82.331	Seriola_dumerili
ENSTNIG00000008958	si:ch211-153b23.4	98	59.124	ENSTGUG00000005499	-	99	59.124	Taeniopygia_guttata
ENSTNIG00000008958	si:ch211-153b23.4	97	86.420	ENSTRUG00000003247	si:ch211-153b23.4	100	86.296	Takifugu_rubripes
ENSTNIG00000008958	si:ch211-153b23.4	63	30.975	ENSTRUG00000020530	si:ch211-153b23.3	57	31.549	Takifugu_rubripes
ENSTNIG00000008958	si:ch211-153b23.4	99	54.345	ENSXETG00000004489	-	94	54.345	Xenopus_tropicalis
ENSTNIG00000008958	si:ch211-153b23.4	99	77.549	ENSXMAG00000021388	si:ch211-153b23.4	99	77.549	Xiphophorus_maculatus
ENSTNIG00000008958	si:ch211-153b23.4	97	77.764	ENSXMAG00000009416	-	95	77.764	Xiphophorus_maculatus