EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000009020 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2602 bases
Position: chr4:2827366-2829967
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000011876	zf-C2H2	PF00096.26	1e-09	1	1
ENSTNIP00000011876	zf-met	PF12874.7	8.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012066	-	1107	-	ENSTNIP00000011876	368 (aa)	-	H3CUE2

Gene Model

Click here to download ENSTNIG00000009020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000009020	prdm12b	58	32.468	ENSTNIG00000001921	-	99	35.802
ENSTNIG00000009020	prdm12b	64	32.911	ENSTNIG00000005901	prdm5	74	32.911
ENSTNIG00000009020	prdm12b	68	31.077	ENSTNIG00000008194	prdm14	93	40.476
ENSTNIG00000009020	prdm12b	99	76.011	ENSTNIG00000005859	-	99	74.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009020	prdm12b	89	84.384	ENSG00000130711	PRDM12	99	76.702	Homo_sapiens
ENSTNIG00000009020	prdm12b	99	65.344	ENSAPOG00000018234	-	100	65.344	Acanthochromis_polyacanthus
ENSTNIG00000009020	prdm12b	99	85.233	ENSAPOG00000016051	prdm12b	100	86.528	Acanthochromis_polyacanthus
ENSTNIG00000009020	prdm12b	89	83.333	ENSAMEG00000016234	PRDM12	99	83.636	Ailuropoda_melanoleuca
ENSTNIG00000009020	prdm12b	99	77.604	ENSACIG00000005193	-	100	77.604	Amphilophus_citrinellus
ENSTNIG00000009020	prdm12b	99	87.533	ENSACIG00000019578	prdm12b	100	87.533	Amphilophus_citrinellus
ENSTNIG00000009020	prdm12b	99	86.807	ENSAOCG00000015040	prdm12b	100	88.127	Amphiprion_ocellaris
ENSTNIG00000009020	prdm12b	99	87.766	ENSAPEG00000015092	prdm12b	100	89.096	Amphiprion_percula
ENSTNIG00000009020	prdm12b	99	72.680	ENSAPEG00000022849	-	99	73.196	Amphiprion_percula
ENSTNIG00000009020	prdm12b	99	77.436	ENSATEG00000014595	-	96	84.592	Anabas_testudineus
ENSTNIG00000009020	prdm12b	93	81.609	ENSANAG00000020616	PRDM12	97	83.186	Aotus_nancymaae
ENSTNIG00000009020	prdm12b	99	74.055	ENSACLG00000007631	-	100	75.253	Astatotilapia_calliptera
ENSTNIG00000009020	prdm12b	99	86.413	ENSACLG00000011876	prdm12b	100	86.413	Astatotilapia_calliptera
ENSTNIG00000009020	prdm12b	99	81.572	ENSAMXG00000008540	PRDM12	100	80.163	Astyanax_mexicanus
ENSTNIG00000009020	prdm12b	99	81.233	ENSAMXG00000033665	prdm12b	100	81.333	Astyanax_mexicanus
ENSTNIG00000009020	prdm12b	91	83.481	ENSBTAG00000023797	PRDM12	99	78.191	Bos_taurus
ENSTNIG00000009020	prdm12b	91	83.186	ENSCJAG00000020540	PRDM12	99	78.133	Callithrix_jacchus
ENSTNIG00000009020	prdm12b	80	83.165	ENSCAFG00000023076	PRDM12	99	76.558	Canis_familiaris
ENSTNIG00000009020	prdm12b	91	83.481	ENSCAFG00020024046	PRDM12	99	77.573	Canis_lupus_dingo
ENSTNIG00000009020	prdm12b	91	83.481	ENSCHIG00000025005	PRDM12	99	77.984	Capra_hircus
ENSTNIG00000009020	prdm12b	86	83.801	ENSCPOG00000005901	PRDM12	95	83.801	Cavia_porcellus
ENSTNIG00000009020	prdm12b	91	83.186	ENSCCAG00000037485	PRDM12	99	77.513	Cebus_capucinus
ENSTNIG00000009020	prdm12b	91	83.186	ENSCATG00000020327	PRDM12	99	77.513	Cercocebus_atys
ENSTNIG00000009020	prdm12b	91	83.136	ENSCLAG00000005499	PRDM12	90	83.136	Chinchilla_lanigera
ENSTNIG00000009020	prdm12b	91	83.186	ENSCSAG00000014756	PRDM12	99	77.309	Chlorocebus_sabaeus
ENSTNIG00000009020	prdm12b	99	79.189	ENSCPBG00000022628	PRDM12	99	78.378	Chrysemys_picta_bellii
ENSTNIG00000009020	prdm12b	91	83.481	ENSCGRG00001015005	Prdm12	99	77.165	Cricetulus_griseus_chok1gshd
ENSTNIG00000009020	prdm12b	99	85.561	ENSCVAG00000017166	prdm12b	100	86.898	Cyprinodon_variegatus
ENSTNIG00000009020	prdm12b	99	75.510	ENSCVAG00000000944	-	100	75.255	Cyprinodon_variegatus
ENSTNIG00000009020	prdm12b	99	83.065	ENSDARG00000007430	prdm12b	100	82.527	Danio_rerio
ENSTNIG00000009020	prdm12b	89	84.132	ENSDNOG00000042302	PRDM12	99	77.045	Dasypus_novemcinctus
ENSTNIG00000009020	prdm12b	83	65.663	ENSEBUG00000016780	prdm12b	74	66.469	Eptatretus_burgeri
ENSTNIG00000009020	prdm12b	93	81.897	ENSEASG00005008472	PRDM12	99	77.984	Equus_asinus_asinus
ENSTNIG00000009020	prdm12b	89	84.685	ENSECAG00000005933	PRDM12	99	77.984	Equus_caballus
ENSTNIG00000009020	prdm12b	100	80.217	ENSELUG00000013674	PRDM12	100	80.263	Esox_lucius
ENSTNIG00000009020	prdm12b	99	80.800	ENSELUG00000009905	prdm12b	100	80.429	Esox_lucius
ENSTNIG00000009020	prdm12b	91	83.481	ENSFCAG00000043086	PRDM12	99	77.778	Felis_catus
ENSTNIG00000009020	prdm12b	99	78.649	ENSFALG00000001445	PRDM12	89	78.378	Ficedula_albicollis
ENSTNIG00000009020	prdm12b	99	84.309	ENSFHEG00000003944	prdm12b	100	86.170	Fundulus_heteroclitus
ENSTNIG00000009020	prdm12b	99	75.510	ENSFHEG00000007746	-	100	74.745	Fundulus_heteroclitus
ENSTNIG00000009020	prdm12b	90	88.822	ENSGMOG00000011797	prdm12b	100	83.469	Gadus_morhua
ENSTNIG00000009020	prdm12b	99	78.649	ENSGALG00000003895	PRDM12	99	78.378	Gallus_gallus
ENSTNIG00000009020	prdm12b	99	87.037	ENSGAFG00000010827	prdm12b	99	86.772	Gambusia_affinis
ENSTNIG00000009020	prdm12b	99	88.740	ENSGACG00000016713	prdm12b	99	88.472	Gasterosteus_aculeatus
ENSTNIG00000009020	prdm12b	99	79.189	ENSGAGG00000014083	PRDM12	99	78.378	Gopherus_agassizii
ENSTNIG00000009020	prdm12b	89	84.084	ENSGGOG00000010568	PRDM12	99	76.640	Gorilla_gorilla
ENSTNIG00000009020	prdm12b	99	87.166	ENSHBUG00000022878	prdm12b	100	88.503	Haplochromis_burtoni
ENSTNIG00000009020	prdm12b	99	74.055	ENSHBUG00000022537	-	93	75.253	Haplochromis_burtoni
ENSTNIG00000009020	prdm12b	92	82.799	ENSHGLG00000013939	PRDM12	99	76.579	Heterocephalus_glaber_female
ENSTNIG00000009020	prdm12b	99	73.190	ENSHCOG00000021167	-	100	72.654	Hippocampus_comes
ENSTNIG00000009020	prdm12b	89	86.337	ENSHCOG00000003663	prdm12b	100	79.442	Hippocampus_comes
ENSTNIG00000009020	prdm12b	99	79.620	ENSIPUG00000019544	PRDM12	100	78.533	Ictalurus_punctatus
ENSTNIG00000009020	prdm12b	99	83.646	ENSIPUG00000017053	prdm12b	100	83.378	Ictalurus_punctatus
ENSTNIG00000009020	prdm12b	97	79.178	ENSSTOG00000005986	PRDM12	86	83.481	Ictidomys_tridecemlineatus
ENSTNIG00000009020	prdm12b	89	84.685	ENSJJAG00000005424	Prdm12	99	83.976	Jaculus_jaculus
ENSTNIG00000009020	prdm12b	94	80.172	ENSKMAG00000021205	-	94	79.261	Kryptolebias_marmoratus
ENSTNIG00000009020	prdm12b	99	79.167	ENSKMAG00000016921	prdm12b	100	80.392	Kryptolebias_marmoratus
ENSTNIG00000009020	prdm12b	99	87.105	ENSLBEG00000017769	prdm12b	100	87.368	Labrus_bergylta
ENSTNIG00000009020	prdm12b	99	78.125	ENSLBEG00000007776	-	100	78.182	Labrus_bergylta
ENSTNIG00000009020	prdm12b	100	79.784	ENSLACG00000017560	PRDM12	100	79.515	Latimeria_chalumnae
ENSTNIG00000009020	prdm12b	99	81.671	ENSLOCG00000005429	prdm12b	99	81.989	Lepisosteus_oculatus
ENSTNIG00000009020	prdm12b	91	81.792	ENSLAFG00000006979	PRDM12	90	82.507	Loxodonta_africana
ENSTNIG00000009020	prdm12b	91	83.186	ENSMFAG00000040322	PRDM12	99	76.440	Macaca_fascicularis
ENSTNIG00000009020	prdm12b	91	83.186	ENSMNEG00000037234	PRDM12	99	77.513	Macaca_nemestrina
ENSTNIG00000009020	prdm12b	99	88.594	ENSMAMG00000013212	prdm12b	100	88.859	Mastacembelus_armatus
ENSTNIG00000009020	prdm12b	99	73.485	ENSMAMG00000018988	-	100	74.937	Mastacembelus_armatus
ENSTNIG00000009020	prdm12b	99	73.684	ENSMZEG00005000415	PRDM12	100	74.874	Maylandia_zebra
ENSTNIG00000009020	prdm12b	96	79.718	ENSMGAG00000005438	PRDM12	98	78.022	Meleagris_gallopavo
ENSTNIG00000009020	prdm12b	99	78.284	ENSMAUG00000013040	Prdm12	99	76.440	Mesocricetus_auratus
ENSTNIG00000009020	prdm12b	91	83.481	ENSMICG00000015480	PRDM12	99	76.781	Microcebus_murinus
ENSTNIG00000009020	prdm12b	96	80.952	ENSMOCG00000021026	Prdm12	90	83.776	Microtus_ochrogaster
ENSTNIG00000009020	prdm12b	99	78.919	ENSMODG00000012108	PRDM12	99	78.976	Monodelphis_domestica
ENSTNIG00000009020	prdm12b	85	84.013	ENSMALG00000021901	prdm12b	100	73.797	Monopterus_albus
ENSTNIG00000009020	prdm12b	89	84.685	MGP_CAROLIEiJ_G0023414	Prdm12	99	77.368	Mus_caroli
ENSTNIG00000009020	prdm12b	89	84.685	ENSMUSG00000079466	Prdm12	99	77.368	Mus_musculus
ENSTNIG00000009020	prdm12b	89	84.685	MGP_PahariEiJ_G0024871	Prdm12	99	77.368	Mus_pahari
ENSTNIG00000009020	prdm12b	89	84.685	MGP_SPRETEiJ_G0024331	Prdm12	99	77.368	Mus_spretus
ENSTNIG00000009020	prdm12b	89	84.084	ENSNGAG00000018480	Prdm12	99	77.628	Nannospalax_galili
ENSTNIG00000009020	prdm12b	99	86.737	ENSNBRG00000006727	prdm12b	100	86.737	Neolamprologus_brichardi
ENSTNIG00000009020	prdm12b	99	73.404	ENSNBRG00000024312	-	100	73.936	Neolamprologus_brichardi
ENSTNIG00000009020	prdm12b	99	71.429	ENSMEUG00000003828	PRDM12	99	71.505	Notamacropus_eugenii
ENSTNIG00000009020	prdm12b	89	84.384	ENSOPRG00000008680	PRDM12	99	83.680	Ochotona_princeps
ENSTNIG00000009020	prdm12b	97	80.110	ENSODEG00000016282	PRDM12	62	83.186	Octodon_degus
ENSTNIG00000009020	prdm12b	62	77.155	ENSOANG00000001043	PRDM12	100	76.724	Ornithorhynchus_anatinus
ENSTNIG00000009020	prdm12b	83	83.713	ENSOCUG00000008241	PRDM12	96	83.713	Oryctolagus_cuniculus
ENSTNIG00000009020	prdm12b	99	85.827	ENSORLG00000007114	prdm12b	99	85.827	Oryzias_latipes
ENSTNIG00000009020	prdm12b	99	75.000	ENSORLG00000017558	-	100	75.510	Oryzias_latipes
ENSTNIG00000009020	prdm12b	99	85.302	ENSORLG00020019565	prdm12b	99	85.302	Oryzias_latipes_hni
ENSTNIG00000009020	prdm12b	99	75.064	ENSORLG00020013167	-	100	75.318	Oryzias_latipes_hni
ENSTNIG00000009020	prdm12b	99	86.053	ENSORLG00015007621	prdm12b	99	86.053	Oryzias_latipes_hsok
ENSTNIG00000009020	prdm12b	99	75.000	ENSORLG00015003435	-	100	75.510	Oryzias_latipes_hsok
ENSTNIG00000009020	prdm12b	99	77.403	ENSOMEG00000007762	-	100	77.403	Oryzias_melastigma
ENSTNIG00000009020	prdm12b	99	85.156	ENSOMEG00000004134	prdm12b	99	84.635	Oryzias_melastigma
ENSTNIG00000009020	prdm12b	91	83.481	ENSOGAG00000007557	PRDM12	99	83.481	Otolemur_garnettii
ENSTNIG00000009020	prdm12b	79	82.594	ENSPPAG00000031506	-	96	82.594	Pan_paniscus
ENSTNIG00000009020	prdm12b	99	73.387	ENSPPRG00000023024	PRDM12	92	73.387	Panthera_pardus
ENSTNIG00000009020	prdm12b	89	84.384	ENSPTRG00000043324	-	99	76.903	Pan_troglodytes
ENSTNIG00000009020	prdm12b	89	84.384	ENSPTRG00000021475	PRDM12	99	76.903	Pan_troglodytes
ENSTNIG00000009020	prdm12b	91	83.186	ENSPANG00000025967	PRDM12	99	77.513	Papio_anubis
ENSTNIG00000009020	prdm12b	99	82.400	ENSPKIG00000007228	prdm12b	100	82.667	Paramormyrops_kingsleyae
ENSTNIG00000009020	prdm12b	89	81.212	ENSPKIG00000004305	PRDM12	94	81.212	Paramormyrops_kingsleyae
ENSTNIG00000009020	prdm12b	99	79.459	ENSPSIG00000006739	PRDM12	99	78.649	Pelodiscus_sinensis
ENSTNIG00000009020	prdm12b	99	75.194	ENSPMGG00000002356	-	100	75.000	Periophthalmus_magnuspinnatus
ENSTNIG00000009020	prdm12b	99	87.772	ENSPMGG00000008867	prdm12b	99	87.772	Periophthalmus_magnuspinnatus
ENSTNIG00000009020	prdm12b	94	81.921	ENSPEMG00000009969	Prdm12	91	83.481	Peromyscus_maniculatus_bairdii
ENSTNIG00000009020	prdm12b	99	79.245	ENSPCIG00000024119	PRDM12	99	79.301	Phascolarctos_cinereus
ENSTNIG00000009020	prdm12b	99	86.436	ENSPFOG00000019841	prdm12b	100	85.904	Poecilia_formosa
ENSTNIG00000009020	prdm12b	99	86.016	ENSPLAG00000016626	prdm12b	99	87.335	Poecilia_latipinna
ENSTNIG00000009020	prdm12b	96	86.921	ENSPMEG00000016698	prdm12b	99	87.123	Poecilia_mexicana
ENSTNIG00000009020	prdm12b	99	85.340	ENSPREG00000015073	prdm12b	99	86.842	Poecilia_reticulata
ENSTNIG00000009020	prdm12b	90	77.193	ENSPREG00000003211	-	90	77.193	Poecilia_reticulata
ENSTNIG00000009020	prdm12b	93	81.609	ENSPPYG00000019694	PRDM12	92	84.384	Pongo_abelii
ENSTNIG00000009020	prdm12b	91	83.481	ENSPCOG00000022255	PRDM12	99	77.165	Propithecus_coquereli
ENSTNIG00000009020	prdm12b	91	83.136	ENSPVAG00000001511	PRDM12	99	78.016	Pteropus_vampyrus
ENSTNIG00000009020	prdm12b	99	73.684	ENSPNYG00000013589	-	100	74.874	Pundamilia_nyererei
ENSTNIG00000009020	prdm12b	99	86.436	ENSPNYG00000009607	prdm12b	100	86.436	Pundamilia_nyererei
ENSTNIG00000009020	prdm12b	99	82.210	ENSPNAG00000024532	prdm12b	100	81.769	Pygocentrus_nattereri
ENSTNIG00000009020	prdm12b	99	79.200	ENSPNAG00000013396	PRDM12	100	78.667	Pygocentrus_nattereri
ENSTNIG00000009020	prdm12b	89	84.685	ENSRNOG00000009218	Prdm12	99	77.368	Rattus_norvegicus
ENSTNIG00000009020	prdm12b	87	84.308	ENSRBIG00000042712	PRDM12	91	82.249	Rhinopithecus_bieti
ENSTNIG00000009020	prdm12b	88	84.498	ENSRROG00000043554	PRDM12	99	84.498	Rhinopithecus_roxellana
ENSTNIG00000009020	prdm12b	99	78.763	ENSSHAG00000015972	PRDM12	99	78.820	Sarcophilus_harrisii
ENSTNIG00000009020	prdm12b	99	85.347	ENSSMAG00000003754	prdm12b	100	85.861	Scophthalmus_maximus
ENSTNIG00000009020	prdm12b	99	88.189	ENSSDUG00000023498	prdm12b	100	88.189	Seriola_dumerili
ENSTNIG00000009020	prdm12b	99	77.835	ENSSDUG00000019071	-	100	77.835	Seriola_dumerili
ENSTNIG00000009020	prdm12b	99	79.189	ENSSLDG00000013562	-	100	78.919	Seriola_lalandi_dorsalis
ENSTNIG00000009020	prdm12b	99	87.402	ENSSLDG00000009557	prdm12b	100	87.402	Seriola_lalandi_dorsalis
ENSTNIG00000009020	prdm12b	99	79.459	ENSSPUG00000013424	PRDM12	99	79.189	Sphenodon_punctatus
ENSTNIG00000009020	prdm12b	99	85.526	ENSSPAG00000018824	prdm12b	100	86.842	Stegastes_partitus
ENSTNIG00000009020	prdm12b	99	69.330	ENSSPAG00000022420	-	100	70.341	Stegastes_partitus
ENSTNIG00000009020	prdm12b	91	83.481	ENSSSCG00000005703	PRDM12	99	77.573	Sus_scrofa
ENSTNIG00000009020	prdm12b	99	77.957	ENSTRUG00000013239	-	100	77.688	Takifugu_rubripes
ENSTNIG00000009020	prdm12b	99	96.196	ENSTRUG00000018659	prdm12b	100	96.196	Takifugu_rubripes
ENSTNIG00000009020	prdm12b	91	83.235	ENSUAMG00000009653	PRDM12	91	83.481	Ursus_americanus
ENSTNIG00000009020	prdm12b	91	83.235	ENSVVUG00000027662	PRDM12	79	83.481	Vulpes_vulpes
ENSTNIG00000009020	prdm12b	99	86.364	ENSXCOG00000002836	prdm12b	99	86.436	Xiphophorus_couchianus
ENSTNIG00000009020	prdm12b	99	74.169	ENSXMAG00000028012	-	100	73.604	Xiphophorus_maculatus
ENSTNIG00000009020	prdm12b	99	85.146	ENSXMAG00000005537	prdm12b	100	85.224	Xiphophorus_maculatus