EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000009090 (Gene tree)
Gene ID: -
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B%2C a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 9962 bases
Position: chr4:1798606-1808567
Accession: ZDB-GENE-050309-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004056	RRM_1	PF00076.22	8.3e-09	1	1
ENSTNIP00000011949	RRM_1	PF00076.22	8.3e-09	1	1
ENSTNIP00000001164	RRM_1	PF00076.22	8.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001850	-	5427	-	ENSTNIP00000004056	1808 (aa)	-	H3C735
ENSTNIT00000002243	-	5484	-	ENSTNIP00000001164	1827 (aa)	-	H3BYU8
ENSTNIT00000012139	-	5481	-	ENSTNIP00000011949	1826 (aa)	-	H3CUL5

Gene Model

Click here to download ENSTNIG00000009090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000009090	setd1ba	55	66.990	ENSTNIG00000014930	setd1a	61	65.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009090	setd1ba	53	68.954	ENSG00000099381	SETD1A	58	68.810	Homo_sapiens
ENSTNIG00000009090	setd1ba	56	85.340	ENSAPOG00000014731	setd1ba	100	79.347	Acanthochromis_polyacanthus
ENSTNIG00000009090	setd1ba	56	80.859	ENSACIG00000016453	setd1ba	100	72.151	Amphilophus_citrinellus
ENSTNIG00000009090	setd1ba	97	79.599	ENSAOCG00000012148	setd1ba	99	79.978	Amphiprion_ocellaris
ENSTNIG00000009090	setd1ba	100	77.501	ENSAPEG00000010762	setd1ba	99	77.543	Amphiprion_percula
ENSTNIG00000009090	setd1ba	91	80.120	ENSATEG00000021563	setd1ba	98	81.568	Anabas_testudineus
ENSTNIG00000009090	setd1ba	87	58.597	ENSAPLG00000005217	SETD1B	82	58.320	Anas_platyrhynchos
ENSTNIG00000009090	setd1ba	56	84.442	ENSACLG00000016584	setd1ba	100	79.207	Astatotilapia_calliptera
ENSTNIG00000009090	setd1ba	50	68.954	ENSBTAG00000002345	SETD1A	64	68.954	Bos_taurus
ENSTNIG00000009090	setd1ba	62	69.205	ENSCJAG00000003000	SETD1A	58	68.810	Callithrix_jacchus
ENSTNIG00000009090	setd1ba	60	68.954	ENSCHIG00000025896	SETD1A	64	68.954	Capra_hircus
ENSTNIG00000009090	setd1ba	50	72.783	ENSCHIG00000013406	SETD1B	87	53.674	Capra_hircus
ENSTNIG00000009090	setd1ba	64	69.281	ENSCPOG00000025456	SETD1A	58	69.281	Cavia_porcellus
ENSTNIG00000009090	setd1ba	62	69.205	ENSCCAG00000025600	SETD1A	64	68.810	Cebus_capucinus
ENSTNIG00000009090	setd1ba	53	68.954	ENSCATG00000035417	SETD1A	58	68.810	Cercocebus_atys
ENSTNIG00000009090	setd1ba	50	81.562	ENSCLAG00000013200	SETD1B	85	58.333	Chinchilla_lanigera
ENSTNIG00000009090	setd1ba	65	69.281	ENSCLAG00000011583	SETD1A	63	69.281	Chinchilla_lanigera
ENSTNIG00000009090	setd1ba	53	68.954	ENSCSAG00000005791	SETD1A	58	68.810	Chlorocebus_sabaeus
ENSTNIG00000009090	setd1ba	61	52.439	ENSCPBG00000026067	SETD1B	94	58.492	Chrysemys_picta_bellii
ENSTNIG00000009090	setd1ba	83	68.148	ENSCANG00000023445	SETD1B	74	66.426	Colobus_angolensis_palliatus
ENSTNIG00000009090	setd1ba	53	69.281	ENSCGRG00001022425	-	63	69.281	Cricetulus_griseus_chok1gshd
ENSTNIG00000009090	setd1ba	53	69.281	ENSCGRG00000016965	-	63	69.281	Cricetulus_griseus_crigri
ENSTNIG00000009090	setd1ba	56	76.270	ENSCVAG00000022068	setd1ba	99	71.625	Cyprinodon_variegatus
ENSTNIG00000009090	setd1ba	64	80.547	ENSEASG00005012369	SETD1B	86	58.571	Equus_asinus_asinus
ENSTNIG00000009090	setd1ba	83	73.333	ENSELUG00000022712	-	65	70.154	Esox_lucius
ENSTNIG00000009090	setd1ba	89	81.346	ENSFALG00000009136	SETD1B	68	79.941	Ficedula_albicollis
ENSTNIG00000009090	setd1ba	56	78.101	ENSFHEG00000013126	setd1ba	54	79.523	Fundulus_heteroclitus
ENSTNIG00000009090	setd1ba	53	89.342	ENSGMOG00000009831	setd1ba	59	89.342	Gadus_morhua
ENSTNIG00000009090	setd1ba	55	72.895	ENSGALG00000004324	SETD1B	86	57.500	Gallus_gallus
ENSTNIG00000009090	setd1ba	89	80.298	ENSGAFG00000008712	setd1ba	87	80.132	Gambusia_affinis
ENSTNIG00000009090	setd1ba	86	75.220	ENSGACG00000017002	setd1ba	89	76.136	Gasterosteus_aculeatus
ENSTNIG00000009090	setd1ba	53	68.954	ENSGGOG00000016052	SETD1A	59	68.810	Gorilla_gorilla
ENSTNIG00000009090	setd1ba	56	84.442	ENSHBUG00000019992	setd1ba	100	79.185	Haplochromis_burtoni
ENSTNIG00000009090	setd1ba	100	72.338	ENSHCOG00000001951	setd1ba	99	72.419	Hippocampus_comes
ENSTNIG00000009090	setd1ba	56	69.281	ENSSTOG00000005369	SETD1A	58	69.281	Ictidomys_tridecemlineatus
ENSTNIG00000009090	setd1ba	54	75.598	ENSKMAG00000007804	setd1ba	99	71.185	Kryptolebias_marmoratus
ENSTNIG00000009090	setd1ba	100	74.488	ENSLBEG00000020113	setd1ba	96	79.606	Labrus_bergylta
ENSTNIG00000009090	setd1ba	53	66.434	ENSLACG00000018379	SETD1B	89	57.033	Latimeria_chalumnae
ENSTNIG00000009090	setd1ba	53	68.954	ENSMFAG00000003435	SETD1A	58	68.810	Macaca_fascicularis
ENSTNIG00000009090	setd1ba	53	68.197	ENSMMUG00000003233	SETD1A	75	57.219	Macaca_mulatta
ENSTNIG00000009090	setd1ba	53	68.954	ENSMLEG00000030176	SETD1A	58	68.810	Mandrillus_leucophaeus
ENSTNIG00000009090	setd1ba	100	78.964	ENSMAMG00000011027	setd1ba	100	78.913	Mastacembelus_armatus
ENSTNIG00000009090	setd1ba	56	84.442	ENSMZEG00005026617	setd1ba	100	79.207	Maylandia_zebra
ENSTNIG00000009090	setd1ba	64	56.522	ENSMGAG00000004421	SETD1B	85	57.638	Meleagris_gallopavo
ENSTNIG00000009090	setd1ba	53	68.954	ENSMICG00000001575	SETD1A	58	68.954	Microcebus_murinus
ENSTNIG00000009090	setd1ba	53	69.281	ENSMOCG00000012528	-	62	60.209	Microtus_ochrogaster
ENSTNIG00000009090	setd1ba	100	78.341	ENSMMOG00000008190	setd1ba	99	78.939	Mola_mola
ENSTNIG00000009090	setd1ba	56	84.308	ENSNBRG00000002915	setd1ba	99	77.796	Neolamprologus_brichardi
ENSTNIG00000009090	setd1ba	53	80.938	ENSODEG00000010155	SETD1B	99	47.444	Octodon_degus
ENSTNIG00000009090	setd1ba	56	83.984	ENSONIG00000013898	setd1ba	100	78.680	Oreochromis_niloticus
ENSTNIG00000009090	setd1ba	66	67.712	ENSONIG00000010832	-	54	67.385	Oreochromis_niloticus
ENSTNIG00000009090	setd1ba	100	72.380	ENSORLG00000008435	setd1ba	100	72.867	Oryzias_latipes
ENSTNIG00000009090	setd1ba	99	73.071	ENSORLG00020017079	setd1ba	100	73.180	Oryzias_latipes_hni
ENSTNIG00000009090	setd1ba	66	70.579	ENSORLG00015004156	setd1ba	98	69.699	Oryzias_latipes_hsok
ENSTNIG00000009090	setd1ba	65	80.547	ENSPPRG00000021041	SETD1B	71	80.547	Panthera_pardus
ENSTNIG00000009090	setd1ba	53	68.954	ENSPTRG00000008024	SETD1A	58	68.810	Pan_troglodytes
ENSTNIG00000009090	setd1ba	53	68.954	ENSPANG00000025141	SETD1A	64	68.810	Papio_anubis
ENSTNIG00000009090	setd1ba	86	80.500	ENSPMGG00000011527	setd1ba	90	80.167	Periophthalmus_magnuspinnatus
ENSTNIG00000009090	setd1ba	56	75.819	ENSPFOG00000019768	setd1ba	99	71.968	Poecilia_formosa
ENSTNIG00000009090	setd1ba	53	69.281	ENSPCOG00000020896	SETD1A	58	69.281	Propithecus_coquereli
ENSTNIG00000009090	setd1ba	56	84.405	ENSPNYG00000009484	setd1ba	99	77.802	Pundamilia_nyererei
ENSTNIG00000009090	setd1ba	76	57.035	ENSPNAG00000016011	setd1ba	99	57.705	Pygocentrus_nattereri
ENSTNIG00000009090	setd1ba	53	69.608	ENSRNOG00000055028	Setd1a	63	69.608	Rattus_norvegicus
ENSTNIG00000009090	setd1ba	52	75.000	ENSRNOG00000001337	Setd1b	90	48.137	Rattus_norvegicus
ENSTNIG00000009090	setd1ba	52	68.771	ENSSBOG00000020392	SETD1A	58	68.387	Saimiri_boliviensis_boliviensis
ENSTNIG00000009090	setd1ba	74	69.773	ENSSFOG00015004814	SETD1B	89	72.951	Scleropages_formosus
ENSTNIG00000009090	setd1ba	100	74.216	ENSSMAG00000001244	setd1ba	99	74.040	Scophthalmus_maximus
ENSTNIG00000009090	setd1ba	56	84.354	ENSSLDG00000015543	setd1ba	99	80.200	Seriola_lalandi_dorsalis
ENSTNIG00000009090	setd1ba	100	80.514	ENSSPAG00000015470	setd1ba	100	80.746	Stegastes_partitus
ENSTNIG00000009090	setd1ba	58	80.243	ENSSSCG00000009806	SETD1B	90	59.760	Sus_scrofa
ENSTNIG00000009090	setd1ba	53	81.651	ENSTGUG00000006093	-	67	81.651	Taeniopygia_guttata
ENSTNIG00000009090	setd1ba	99	83.179	ENSTRUG00000009533	setd1ba	100	83.821	Takifugu_rubripes