EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000009156 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b%2C subunit 4
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2266 bases
Position: chr21:1695393-1697658
Accession: ZDB-GENE-020419-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000012017	RRM_1	PF00076.22	1.9e-39	1	2
ENSTNIP00000012017	RRM_1	PF00076.22	1.9e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000012207	-	1176	-	ENSTNIP00000012017	391 (aa)	-	H3CUT3

Gene Model

Click here to download ENSTNIG00000009156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000009156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000009156	sf3b4	58	97.368	ENSG00000143368	SF3B4	98	96.257	Homo_sapiens
ENSTNIG00000009156	sf3b4	59	98.696	ENSAPOG00000017647	sf3b4	58	98.696	Acanthochromis_polyacanthus
ENSTNIG00000009156	sf3b4	58	99.119	ENSAOCG00000019801	sf3b4	57	98.690	Amphiprion_ocellaris
ENSTNIG00000009156	sf3b4	58	99.119	ENSAPEG00000010365	sf3b4	57	98.690	Amphiprion_percula
ENSTNIG00000009156	sf3b4	59	98.261	ENSATEG00000012844	sf3b4	57	98.690	Anabas_testudineus
ENSTNIG00000009156	sf3b4	55	100.000	ENSACAG00000010019	SF3B4	55	97.817	Anolis_carolinensis
ENSTNIG00000009156	sf3b4	58	97.368	ENSANAG00000031025	SF3B4	54	96.957	Aotus_nancymaae
ENSTNIG00000009156	sf3b4	61	97.468	ENSACLG00000014260	sf3b4	57	98.696	Astatotilapia_calliptera
ENSTNIG00000009156	sf3b4	59	98.261	ENSAMXG00000008282	sf3b4	57	98.261	Astyanax_mexicanus
ENSTNIG00000009156	sf3b4	80	64.151	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSTNIG00000009156	sf3b4	58	97.368	ENSTSYG00000009295	SF3B4	54	96.957	Carlito_syrichta
ENSTNIG00000009156	sf3b4	58	96.491	ENSCCAG00000021751	-	52	96.087	Cebus_capucinus
ENSTNIG00000009156	sf3b4	58	97.368	ENSCATG00000033114	SF3B4	54	96.957	Cercocebus_atys
ENSTNIG00000009156	sf3b4	58	97.368	ENSCSAG00000018129	SF3B4	54	96.957	Chlorocebus_sabaeus
ENSTNIG00000009156	sf3b4	55	100.000	ENSCPBG00000008041	SF3B4	55	97.817	Chrysemys_picta_bellii
ENSTNIG00000009156	sf3b4	55	90.654	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSTNIG00000009156	sf3b4	53	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSTNIG00000009156	sf3b4	58	97.368	ENSCANG00000035579	SF3B4	54	96.957	Colobus_angolensis_palliatus
ENSTNIG00000009156	sf3b4	68	89.630	ENSCVAG00000005536	sf3b4	68	90.602	Cyprinodon_variegatus
ENSTNIG00000009156	sf3b4	59	98.261	ENSDARG00000018574	sf3b4	58	98.261	Danio_rerio
ENSTNIG00000009156	sf3b4	97	61.809	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSTNIG00000009156	sf3b4	85	81.322	ENSELUG00000012876	sf3b4	58	99.149	Esox_lucius
ENSTNIG00000009156	sf3b4	59	97.826	ENSGMOG00000002519	sf3b4	67	97.826	Gadus_morhua
ENSTNIG00000009156	sf3b4	55	100.000	ENSGALG00000013352	SF3B4	55	98.253	Gallus_gallus
ENSTNIG00000009156	sf3b4	68	93.233	ENSGAFG00000010181	sf3b4	58	98.690	Gambusia_affinis
ENSTNIG00000009156	sf3b4	58	99.119	ENSGACG00000003819	sf3b4	58	98.261	Gasterosteus_aculeatus
ENSTNIG00000009156	sf3b4	58	97.368	ENSGGOG00000004761	SF3B4	54	96.957	Gorilla_gorilla
ENSTNIG00000009156	sf3b4	99	58.911	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSTNIG00000009156	sf3b4	61	97.468	ENSHBUG00000002028	sf3b4	57	98.696	Haplochromis_burtoni
ENSTNIG00000009156	sf3b4	58	97.368	ENSHGLG00100008533	SF3B4	55	96.957	Heterocephalus_glaber_male
ENSTNIG00000009156	sf3b4	58	98.238	ENSHCOG00000003014	sf3b4	57	97.817	Hippocampus_comes
ENSTNIG00000009156	sf3b4	59	98.696	ENSIPUG00000012242	Sf3b4	58	98.696	Ictalurus_punctatus
ENSTNIG00000009156	sf3b4	57	70.370	ENSJJAG00000022500	Sf3b4	55	70.073	Jaculus_jaculus
ENSTNIG00000009156	sf3b4	61	97.468	ENSKMAG00000008154	sf3b4	59	98.696	Kryptolebias_marmoratus
ENSTNIG00000009156	sf3b4	60	98.283	ENSLBEG00000026818	sf3b4	66	94.717	Labrus_bergylta
ENSTNIG00000009156	sf3b4	58	96.491	ENSLACG00000004436	SF3B4	63	96.491	Latimeria_chalumnae
ENSTNIG00000009156	sf3b4	59	98.276	ENSLOCG00000009048	sf3b4	54	99.127	Lepisosteus_oculatus
ENSTNIG00000009156	sf3b4	58	97.368	ENSLAFG00000008531	SF3B4	54	96.957	Loxodonta_africana
ENSTNIG00000009156	sf3b4	75	66.443	ENSMFAG00000039067	-	58	78.341	Macaca_fascicularis
ENSTNIG00000009156	sf3b4	58	97.368	ENSMFAG00000042395	SF3B4	54	96.957	Macaca_fascicularis
ENSTNIG00000009156	sf3b4	58	97.368	ENSMMUG00000007256	SF3B4	54	96.957	Macaca_mulatta
ENSTNIG00000009156	sf3b4	94	59.409	ENSMNEG00000031526	-	58	77.880	Macaca_nemestrina
ENSTNIG00000009156	sf3b4	58	97.368	ENSMNEG00000031839	SF3B4	54	96.957	Macaca_nemestrina
ENSTNIG00000009156	sf3b4	58	97.368	ENSMLEG00000038667	SF3B4	54	96.957	Mandrillus_leucophaeus
ENSTNIG00000009156	sf3b4	61	97.468	ENSMAMG00000014692	sf3b4	57	98.690	Mastacembelus_armatus
ENSTNIG00000009156	sf3b4	61	97.468	ENSMZEG00005026741	sf3b4	57	98.696	Maylandia_zebra
ENSTNIG00000009156	sf3b4	55	100.000	ENSMGAG00000000653	SF3B4	55	98.253	Meleagris_gallopavo
ENSTNIG00000009156	sf3b4	59	98.261	ENSMMOG00000018032	sf3b4	67	95.455	Mola_mola
ENSTNIG00000009156	sf3b4	58	97.368	ENSMODG00000018767	SF3B4	54	96.957	Monodelphis_domestica
ENSTNIG00000009156	sf3b4	58	99.119	ENSMALG00000006174	sf3b4	57	98.690	Monopterus_albus
ENSTNIG00000009156	sf3b4	58	97.368	ENSNGAG00000016337	Sf3b4	54	96.957	Nannospalax_galili
ENSTNIG00000009156	sf3b4	61	97.468	ENSNBRG00000013865	sf3b4	57	98.696	Neolamprologus_brichardi
ENSTNIG00000009156	sf3b4	88	66.576	ENSNLEG00000000537	-	58	87.391	Nomascus_leucogenys
ENSTNIG00000009156	sf3b4	99	48.113	ENSNLEG00000009693	-	99	48.113	Nomascus_leucogenys
ENSTNIG00000009156	sf3b4	58	80.349	ENSODEG00000003597	-	57	80.087	Octodon_degus
ENSTNIG00000009156	sf3b4	89	57.453	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSTNIG00000009156	sf3b4	61	97.046	ENSONIG00000002730	sf3b4	57	98.696	Oreochromis_niloticus
ENSTNIG00000009156	sf3b4	66	71.161	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSTNIG00000009156	sf3b4	75	90.541	ENSORLG00000003062	sf3b4	75	89.726	Oryzias_latipes
ENSTNIG00000009156	sf3b4	75	90.541	ENSORLG00020000687	sf3b4	73	89.726	Oryzias_latipes_hni
ENSTNIG00000009156	sf3b4	75	90.541	ENSORLG00015010989	sf3b4	73	89.726	Oryzias_latipes_hsok
ENSTNIG00000009156	sf3b4	59	97.845	ENSOMEG00000013694	sf3b4	58	98.261	Oryzias_melastigma
ENSTNIG00000009156	sf3b4	63	77.733	ENSOARG00000007368	-	55	80.973	Ovis_aries
ENSTNIG00000009156	sf3b4	75	75.738	ENSPPAG00000030024	-	56	86.522	Pan_paniscus
ENSTNIG00000009156	sf3b4	58	97.368	ENSPPAG00000040904	SF3B4	54	96.957	Pan_paniscus
ENSTNIG00000009156	sf3b4	75	75.748	ENSPTRG00000049727	-	58	86.957	Pan_troglodytes
ENSTNIG00000009156	sf3b4	58	97.368	ENSPTRG00000001243	SF3B4	54	96.957	Pan_troglodytes
ENSTNIG00000009156	sf3b4	58	97.368	ENSPANG00000005126	SF3B4	54	96.957	Papio_anubis
ENSTNIG00000009156	sf3b4	60	98.718	ENSPKIG00000020669	sf3b4	61	99.130	Paramormyrops_kingsleyae
ENSTNIG00000009156	sf3b4	67	85.057	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSTNIG00000009156	sf3b4	58	97.368	ENSPCIG00000008765	SF3B4	54	96.957	Phascolarctos_cinereus
ENSTNIG00000009156	sf3b4	68	90.406	ENSPFOG00000005754	sf3b4	68	92.857	Poecilia_formosa
ENSTNIG00000009156	sf3b4	68	90.406	ENSPLAG00000001401	sf3b4	73	92.857	Poecilia_latipinna
ENSTNIG00000009156	sf3b4	68	90.037	ENSPREG00000011076	sf3b4	66	92.857	Poecilia_reticulata
ENSTNIG00000009156	sf3b4	53	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSTNIG00000009156	sf3b4	61	97.468	ENSPNYG00000012700	sf3b4	57	98.696	Pundamilia_nyererei
ENSTNIG00000009156	sf3b4	59	98.696	ENSPNAG00000000686	sf3b4	59	98.696	Pygocentrus_nattereri
ENSTNIG00000009156	sf3b4	58	97.368	ENSRBIG00000043392	SF3B4	54	96.957	Rhinopithecus_bieti
ENSTNIG00000009156	sf3b4	93	56.842	ENSRROG00000028213	-	56	73.423	Rhinopithecus_roxellana
ENSTNIG00000009156	sf3b4	58	97.368	ENSRROG00000029366	SF3B4	54	96.957	Rhinopithecus_roxellana
ENSTNIG00000009156	sf3b4	58	96.930	ENSSBOG00000012310	-	54	96.522	Saimiri_boliviensis_boliviensis
ENSTNIG00000009156	sf3b4	58	92.544	ENSSHAG00000004043	SF3B4	54	91.964	Sarcophilus_harrisii
ENSTNIG00000009156	sf3b4	61	97.468	ENSSFOG00015008864	sf3b4	56	98.690	Scleropages_formosus
ENSTNIG00000009156	sf3b4	75	86.957	ENSSMAG00000006837	sf3b4	67	95.489	Scophthalmus_maximus
ENSTNIG00000009156	sf3b4	68	91.481	ENSSDUG00000012064	sf3b4	66	95.113	Seriola_dumerili
ENSTNIG00000009156	sf3b4	59	98.696	ENSSLDG00000014226	sf3b4	57	99.127	Seriola_lalandi_dorsalis
ENSTNIG00000009156	sf3b4	100	72.195	ENSSPUG00000001028	SF3B4	57	97.817	Sphenodon_punctatus
ENSTNIG00000009156	sf3b4	59	98.696	ENSSPAG00000019219	sf3b4	57	98.696	Stegastes_partitus
ENSTNIG00000009156	sf3b4	58	97.368	ENSSSCG00000006665	-	54	96.957	Sus_scrofa
ENSTNIG00000009156	sf3b4	60	96.610	ENSTGUG00000004470	SF3B4	91	97.826	Taeniopygia_guttata
ENSTNIG00000009156	sf3b4	100	95.477	ENSTRUG00000004516	sf3b4	100	95.477	Takifugu_rubripes
ENSTNIG00000009156	sf3b4	58	97.368	ENSUMAG00000003802	SF3B4	55	96.957	Ursus_maritimus
ENSTNIG00000009156	sf3b4	58	97.368	ENSVVUG00000007732	-	59	96.957	Vulpes_vulpes
ENSTNIG00000009156	sf3b4	74	78.498	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSTNIG00000009156	sf3b4	59	98.690	ENSXCOG00000019895	sf3b4	59	98.690	Xiphophorus_couchianus
ENSTNIG00000009156	sf3b4	59	98.690	ENSXMAG00000003772	sf3b4	59	98.690	Xiphophorus_maculatus